Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78604
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:620630:626551:1 gene:SORBI_3008G008100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGACGAGCAAATCCTCGTGGAGCCAGGTTGTAAAAAATACCAGGCCGACAAACCTG
TCCATTCCCACAAGAAACCTCCAACCACAAGACCTTGGAGCTGTGATATTTGGTTGCACA
AACAATACCATTCAAGAGTGTCACTCACGGCAACTTTTTGGCTTGCCAAAATCACATATT
TCATACGTACGAAACATTAAGGAAGGACTATCTCTCTTCCTCTTCAACTATGATGATCGC
AGATTGTATGGTATTTACGAAGCTGCAGGGAATGGCAAGTTCTGTCCTGAATCAAATGCA
TGGTCACATGATAGCAAGAGCAAAACAAACTATCCTGCCCAGGTTGCAATGCGGGTAAGG
CTGTGGTGTTTCCCGCTAGCAGAGGATCAGTTCAGAAATGCTATTATAGCCAATTACTAT
CAGAACACACCCGGTGTCCCTGGCCAGAAGCTCCATTTTTTCAAGTTTGAATTGGATCAT
GCTCAAACACGTGTTTTGATGGATATGTTTACTCCTTCTCCCCCCAACAATTTCTGGATG
CCCCCTGCCGCAGCACCAGCTGATGATCATTGGAGAGAATTAGTGCTGTCACCTGGATGG
GCAACAGAGCGTGAGGGGAACAATAACCTCAAATCAGAAAAGGTTGTAAAGTCATATGCT
GACATAGTGAAGAAGAATAAATTTGAGGAAGTTGGGACAAGAGATTTGGATGTGGAACAT
GCAAGCTCAGGTAATGAATCTTCTGGTGGTTTCGATGAACTTGATTGTCAATACACATCA
CCAGAGAGGGAGGACTATGCACTATCAGATAGGGTGGTTCCAGTGCAACAACAACAGTAC
CCTGATACGCAGGGGAAAATGCTGAGCTTTGATCAGGTGTTACAAGGGCGCATGGCTTTT
CCTGGTCAGCAGTGGCACTCTGATCTTTATGCCAATACTACTGAAACTGAAGATAATGAT
CCATATAGCTGCAAGTATGCCCAAGAGGTCAAATTTGCAATTCTGGATGGGAGCTCTAAT
TTGCCAGAAACCTTAGATTCTGAAGTTGATAAGCTGTCCTTGGGGCATTCGAATTTGCTG
GTGCAGTTATTGGACTCTGAATCATGCACAGAAGCCAAGATGATTGATGTAGTTAAAGAG
TTATCTGGACGAATAGAGGTGATGGAGAAGAAGCAGGCTTGGTCCAACAAAGAAGTCAAA
CATTTACAGGGGGTGAATGAGAGGTTACTGAAAAGAATTGTTGAACTAAAGGGAACAGTT
AAGACATTGAATTCTAAAATAGATCCTTTGACCCTAGACGATTCGCTTAACCAGTTTGTA
GAACAATGTTTGGGTTCAGAAGATGTCATTTATCTAGTTGGTGGTTTTGATGGCTTCTCA
TTTGTGCCATCACTAGACTCCTTTTCCCCTTCATTGGACGTAGTAACACCCCTCAAACCA
ATGGCTGTTGGCAAGTCATATACCTCAACTGTTGCACTAGAGGGCAAGATATTTGTTCTT
GGTGGTGGTGATGGTGCTTGCTGGTTTGATACAGTTGAATGTTATGACCGAAGCCGTGAT
GATTGGTCCACATGCCCATCGTTGACTCGTGACAAGGGGAGCCTTGCTGGGGTTAGTGTC
AATGGGAGAATCTATGCATTTGGTGGTGGAGATGGAACTGAGTGTTTCTCTGATGTTGAG
ATGTTTGATCCTACTCATGGAAAGTGGATAAAAAATCAACCTATGCTGGAAAAGCTCTGC
TGA

Peptide Sequence

PEP ID

OQU78604
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:620630:626551:1 gene:SORBI_3008G008100 transcript:OQU78604 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVTSKSSWSQVVKNTRPTNLSIPTRNLQPQDLGAVIFGCTNNTIQECHSRQLFGLPKSHI
SYVRNIKEGLSLFLFNYDDRRLYGIYEAAGNGKFCPESNAWSHDSKSKTNYPAQVAMRVR
LWCFPLAEDQFRNAIIANYYQNTPGVPGQKLHFFKFELDHAQTRVLMDMFTPSPPNNFWM
PPAAAPADDHWRELVLSPGWATEREGNNNLKSEKVVKSYADIVKKNKFEEVGTRDLDVEH
ASSGNESSGGFDELDCQYTSPEREDYALSDRVVPVQQQQYPDTQGKMLSFDQVLQGRMAF
PGQQWHSDLYANTTETEDNDPYSCKYAQEVKFAILDGSSNLPETLDSEVDKLSLGHSNLL
VQLLDSESCTEAKMIDVVKELSGRIEVMEKKQAWSNKEVKHLQGVNERLLKRIVELKGTV
KTLNSKIDPLTLDDSLNQFVEQCLGSEDVIYLVGGFDGFSFVPSLDSFSPSLDVVTPLKP
MAVGKSYTSTVALEGKIFVLGGGDGACWFDTVECYDRSRDDWSTCPSLTRDKGSLAGVSV
NGRIYAFGGGDGTECFSDVEMFDPTHGKWIKNQPMLEKLC

Transcript Sequence

Transcript ID

OQU78604
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:620630:626551:1 gene:SORBI_3008G008100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTCCCTTCCCTTCCCTTCTCATCAGAGGCCAGGCCAGAGAGGCAGAGCAGTTCACTCCA
TCCACGCTCCGTCGCCGGCGTGTGAGCGCGAGCAAGAACCACTTCGATCGGTGTGGTGTG
GGCGAGGGTTTCGCTGCAGCGAGAGTGGAGAGCGATCGCCGCCTTCCGTCCTCTTCCTTC
TTGGAACAGTGCGGCAGTGGGGCTTGGCAGTTGGCACTCCTCCACGGCTCCACTCCAAGC
AAAGCAAAGCGATTCCAAGGTACGGACCGTACCACGAAACCCCAACCGAAGCGGAACTTC
CCTTTCCCTTCGCTTCGCTCCTGCTCCTAGCCGATAATGCAATGTAGCCTTCATCCATCT
ATGCAGGGCAAGGACATTGATTCTGAAAGTTTCGTGAACAGGCCAGGGTTTTGTTTTTGC
TCAAAAGAACAGAGTTTTGTGGGCTAGGGGGATTTTCCTTTCACCCCCTGACCTGTGAGT
AACTGTTGTTGCTTCTAGAATGAACATCAAGTGACCACTTCATTGATTTCGCATGTGTCA
CCTTTACCCAATTACTGGTGCCTTCATGTACAACTTGCTCAGTTCCTTCATTAATTTTGC
CCTGTGGCCCCACTACAATTTCTTTTGTGTGGGAGGACTGGGCATTGTACTGAGACATTA
TTGATTGAATCAAAAATGTCTGCACATCATTTTGGTACTCCATTCCATCTACGAGTTCAG
TGACTGGAGCTTCGTCTCCATGTGCTAGTACATATTAACACTCAGGCACCAGGGGCAGTC
GCATCTGTTGAAGTTTGTTACCAAGCTTAACTGAGACTCTGACCTTGTAATGTAGCTCCA
TACTACTCAGTACTCATCATTGAAATTCAGTTTGCATTATTACCATCATTAGAATATTGC
AAAATGGGCCACTCCCAAATCATTTGTGCACCATGATGTATGAAAAGGAAAGTCTCAGTA
AGGGTTATCTGTTCACTTTGATATGTAGATGTACCTAATTATGTTGCCTTCTTTTCTGTT
CTGATGAATCAGAGAAAACAAGTCTGAAAATATACTGTGCTGCAAGTGAGAGTTTTCTTG
AACTTTACTGTACAATAAGCTGAGTCAAATGATATGATAATACCAAATTGTATTATGTGT
ATTTCAGTATTGGCATTACTATCAGTCATTTGATCTTTGCTTTCATGCTTAGAAAATAAG
TACCTGTGATTCCTAAAGAACATTACCTTTTCTTGCCCCATGCATCAACAACTGGACAGT
GCAGTATATTTATTCCTTTCCTTTTGTTTCTCCTCTTGCTAGTATCAGTACAATGGTGAC
GAGCAAATCCTCGTGGAGCCAGGTTGTAAAAAATACCAGGCCGACAAACCTGTCCATTCC
CACAAGAAACCTCCAACCACAAGACCTTGGAGCTGTGATATTTGGTTGCACAAACAATAC
CATTCAAGAGTGTCACTCACGGCAACTTTTTGGCTTGCCAAAATCACATATTTCATACGT
ACGAAACATTAAGGAAGGACTATCTCTCTTCCTCTTCAACTATGATGATCGCAGATTGTA
TGGTATTTACGAAGCTGCAGGGAATGGCAAGTTCTGTCCTGAATCAAATGCATGGTCACA
TGATAGCAAGAGCAAAACAAACTATCCTGCCCAGGTTGCAATGCGGGTAAGGCTGTGGTG
TTTCCCGCTAGCAGAGGATCAGTTCAGAAATGCTATTATAGCCAATTACTATCAGAACAC
ACCCGGTGTCCCTGGCCAGAAGCTCCATTTTTTCAAGTTTGAATTGGATCATGCTCAAAC
ACGTGTTTTGATGGATATGTTTACTCCTTCTCCCCCCAACAATTTCTGGATGCCCCCTGC
CGCAGCACCAGCTGATGATCATTGGAGAGAATTAGTGCTGTCACCTGGATGGGCAACAGA
GCGTGAGGGGAACAATAACCTCAAATCAGAAAAGGTTGTAAAGTCATATGCTGACATAGT
GAAGAAGAATAAATTTGAGGAAGTTGGGACAAGAGATTTGGATGTGGAACATGCAAGCTC
AGGTAATGAATCTTCTGGTGGTTTCGATGAACTTGATTGTCAATACACATCACCAGAGAG
GGAGGACTATGCACTATCAGATAGGGTGGTTCCAGTGCAACAACAACAGTACCCTGATAC
GCAGGGGAAAATGCTGAGCTTTGATCAGGTGTTACAAGGGCGCATGGCTTTTCCTGGTCA
GCAGTGGCACTCTGATCTTTATGCCAATACTACTGAAACTGAAGATAATGATCCATATAG
CTGCAAGTATGCCCAAGAGGTCAAATTTGCAATTCTGGATGGGAGCTCTAATTTGCCAGA
AACCTTAGATTCTGAAGTTGATAAGCTGTCCTTGGGGCATTCGAATTTGCTGGTGCAGTT
ATTGGACTCTGAATCATGCACAGAAGCCAAGATGATTGATGTAGTTAAAGAGTTATCTGG
ACGAATAGAGGTGATGGAGAAGAAGCAGGCTTGGTCCAACAAAGAAGTCAAACATTTACA
GGGGGTGAATGAGAGGTTACTGAAAAGAATTGTTGAACTAAAGGGAACAGTTAAGACATT
GAATTCTAAAATAGATCCTTTGACCCTAGACGATTCGCTTAACCAGTTTGTAGAACAATG
TTTGGGTTCAGAAGATGTCATTTATCTAGTTGGTGGTTTTGATGGCTTCTCATTTGTGCC
ATCACTAGACTCCTTTTCCCCTTCATTGGACGTAGTAACACCCCTCAAACCAATGGCTGT
TGGCAAGTCATATACCTCAACTGTTGCACTAGAGGGCAAGATATTTGTTCTTGGTGGTGG
TGATGGTGCTTGCTGGTTTGATACAGTTGAATGTTATGACCGAAGCCGTGATGATTGGTC
CACATGCCCATCGTTGACTCGTGACAAGGGGAGCCTTGCTGGGGTTAGTGTCAATGGGAG
AATCTATGCATTTGGTGGTGGAGATGGAACTGAGTGTTTCTCTGATGTTGAGATGTTTGA
TCCTACTCATGGAAAGTGGATAAAAAATCAACCTATGCTGGAAAAGCTCTGCTGAAAGAC
TTGATCCTCGGGAGCCTAACTGGAAAATGCTGCCAAAGATGAGTGCAGGAAGGGGCTGTC
ATACGCTTACAGTGCTTGATGAGAAGATGTAAGTCATGTAACTCTTTCTTTTTATGTTGA
AACAATGAACTGAACATATGTAGGATGTTCCTTCTGAGTTCTGAAAAATATGCTATACAT
AACGCGTGCCCAACAAATGGGAGGGGGAGGGGGGGCATCAGGTGTATGCTATCCTTTGTT
GATGTAATTTACCTTTGTATTTTCTTCCAGATTCTCAATTGGTGGATACGACACTGGGGC
TAAAGCAATGGTGGCTACTGTTGAGGTGTATGAGCCAAGGATGCCGTCATGGATGATGGT
GGAACCCATGAACTACACCAGAGGATACCATTCTTCGGCTGTGCTCGGTGGCTCAATATT
CACCTTTGGTGGGGTCAAAGGTGAAGCAGATACAATCTTGGATGTGGTAAGTAGCAACGC
CAAATGAAAAATTTCTTATTGTGTCCATTTGGCTATTAATAATTCAATCGAGCTGGAACC
AAAAATCATACATCCACAATCTTGCATTTAGCTGCCAGGCTACATCAACTGCATATATTG
TTTGTTATCATACCAGTCTCCGCATGAAAGTGTACTGCATTTGAGATGAGTACATATTCT
TGGGTCCTTGAGCACTTATTTTTATTATTTTGCTTTTCTGTTCCTACTACATATACCATT
TTGTTGTCATGTCAGTGGCTAGTGCATATTACGCGTCGTGGCTAACAGTTAAGCATTGTT
GTGATGGTGATTTGTCAGGTGGAACGCTACAAGGAAGGGTGTGGTTGGGTGACTACGGGG
TTGAAGTCGATTGGCAAGAGATGCTACTGCTCAGCGATTGTTCTCTGACTGTAACTGCCT
ACAACAGTATTGACATGGCGAGATATTGTAACTTCTGACAACCAAGTGAGCAGGAAATTG
ATATTAGGCAAAAACTTAATTAATTAGTACTTAGAAGGCTCTTGCTTAGCCTGAACTGAC
AGCAGTAGACATGATGGAGGTCTTCCTCCTGTTTGTTTCTGAATCTCGGAGAACTGTAAA
ACATTGAGCTGTTTGTGTTGACTGGGTCGATGATGCAGCAACACCGGATGTGACAGAGTT
GGTACTGAACTTCTGTAGAACGACACTCGATTGATGAATATCCAGTAGCACTGTGATGGT
T