Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78542
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:59135385:59139888:-1 gene:SORBI_3009G257200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCCGCGCATCGGCAACAGGTTCCGCGTCGGCCGCAAGCTGGGGAGTGGCTCCTTT
GGGGAGATCTACCTCGGCACCAACGTGCAGACCAACGAGGAGGTCGCAATTAAACTGGAA
AATGTTAAGACAAAGCATCCTCAATTGCTTTATGAATCGAAATTGTACAGAATACTTCAA
GGAGGAACTGGAATTCCAAATGTTAAGTGGTTTGGTGTTGAGGGTGATTACAATGTTTTG
GTTATGGACTTACTGGGACCAAGCCTTGAAGATCTTTTTAGCTTTTGTAACAGGAAGCTG
TCCCTCAAAACTGTTTTGATGCTTGCTGATCAAATGATCAATCGAGTTGAGTTTGTTCAT
TCCAAGTCATTCTTGCATAGAGATATTAAGCCGGACAATTTTCTCATGGGTCTTGGGAAA
AGGGCAAACCAGGTTTATGTTATCGATTTTGGACTTGCAAAGAAGTACAGAGATACATCA
ACACACCAGCACATTCCATACAGAGAGAACAAGAACTTGACTGGAACAGCAAGATATGCA
AGTGTAAATACCCACCTTGGAATTGAACAAAGCCGGAGGGATGACATGGAATCTCTTGGA
TATGTACTGATGTACTTCTTGAGAGGAAGCCTTCCATGGCAGGGCCTGAAAGCTGGGAAC
AAGAAACAAAAGTATGAAAAGATCAGCGAAAGGAAAATTGCTACTTCAACTGAGGCTCTC
TGTCGTGGATATCCTACTGAATTTGCTTCTTACTTCCATTACTGTCGCTCACTACGTTTT
GAAGATGCACCGGACTATCAGTACCTGAAGAGATTGTTCAGAGACCTTTTCATTCGGGAA
GGCTTTCAGTTTGATTATGTTTTTGACTGGACCATTCTAAAGTACCAACAGGCACAGATG
ACCACTGCTCCAACACGTGCAATTGCTCCACCAGTAGGACAAAGCTCTGGGATGGCTCCT
GTGGCAAACAACAATAGACATTCAGGCACTGAAGAGGGAAGGAGAAGTGGGTGGTCAGAC
ATGGACCCAACGCGACGCCAGGCTCCACCACCAGTTATAAATGCCGGCAGCCTAGCGAAG
CAGAAGTCCCCTGTTCGGCCTGAGACATCGACATCCAAAGATGCTGTGTTCGACTTTTTT
GGGACGTTCAAGCGGATCTTCAAGGCGGCCTGCTGTCTCTAG

Peptide Sequence

PEP ID

OQU78542
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:59135385:59139888:-1 gene:SORBI_3009G257200 transcript:OQU78542 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEPRIGNRFRVGRKLGSGSFGEIYLGTNVQTNEEVAIKLENVKTKHPQLLYESKLYRILQ
GGTGIPNVKWFGVEGDYNVLVMDLLGPSLEDLFSFCNRKLSLKTVLMLADQMINRVEFVH
SKSFLHRDIKPDNFLMGLGKRANQVYVIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA
SVNTHLGIEQSRRDDMESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISERKIATSTEAL
CRGYPTEFASYFHYCRSLRFEDAPDYQYLKRLFRDLFIREGFQFDYVFDWTILKYQQAQM
TTAPTRAIAPPVGQSSGMAPVANNNRHSGTEEGRRSGWSDMDPTRRQAPPPVINAGSLAK
QKSPVRPETSTSKDAVFDFFGTFKRIFKAACCL

Transcript Sequence

Transcript ID

OQU78542
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:59135385:59139888:-1 gene:SORBI_3009G257200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTAGCCTCCGACACCTCGATTTCTCAGTAATTTCTCCTTTTAGCCAGGCAGCCGGGCCGT
GCTCGAGAAAATAAGGACACCAGCAGCACGAAAGGGGAAAAAAAAAAAGGAGAGCAGAAA
TCCCCCAATCGCCCCCACTTCGATCCATTCGAGCCCTAACCCCGAATCTCCCCGGAGCAT
CAGACTGAATCCATTCGATTCCCTCATGTCAGGCTCCGTCGTCTCCTGCTGATTCCCGAG
ATCGTCTCCACCGGCGCGGCTTCGCCCACAGCTGCCGCCACAGCCATGGAGCCGCGCATC
GGCAACAGGTTCCGCGTCGGCCGCAAGCTGGGGAGTGGCTCCTTTGGGGAGATCTACCTC
GGCACCAACGTGCAGACCAACGAGGAGGTCGCAATTAAACTGGAAAATGTTAAGACAAAG
CATCCTCAATTGCTTTATGAATCGAAATTGTACAGAATACTTCAAGGAGGAACTGGAATT
CCAAATGTTAAGTGGTTTGGTGTTGAGGGTGATTACAATGTTTTGGTTATGGACTTACTG
GGACCAAGCCTTGAAGATCTTTTTAGCTTTTGTAACAGGAAGCTGTCCCTCAAAACTGTT
TTGATGCTTGCTGATCAAATGATCAATCGAGTTGAGTTTGTTCATTCCAAGTCATTCTTG
CATAGAGATATTAAGCCGGACAATTTTCTCATGGGTCTTGGGAAAAGGGCAAACCAGGTT
TATGTTATCGATTTTGGACTTGCAAAGAAGTACAGAGATACATCAACACACCAGCACATT
CCATACAGAGAGAACAAGAACTTGACTGGAACAGCAAGATATGCAAGTGTAAATACCCAC
CTTGGAATTGAACAAAGCCGGAGGGATGACATGGAATCTCTTGGATATGTACTGATGTAC
TTCTTGAGAGGAAGCCTTCCATGGCAGGGCCTGAAAGCTGGGAACAAGAAACAAAAGTAT
GAAAAGATCAGCGAAAGGAAAATTGCTACTTCAACTGAGGCTCTCTGTCGTGGATATCCT
ACTGAATTTGCTTCTTACTTCCATTACTGTCGCTCACTACGTTTTGAAGATGCACCGGAC
TATCAGTACCTGAAGAGATTGTTCAGAGACCTTTTCATTCGGGAAGGCTTTCAGTTTGAT
TATGTTTTTGACTGGACCATTCTAAAGTACCAACAGGCACAGATGACCACTGCTCCAACA
CGTGCAATTGCTCCACCAGTAGGACAAAGCTCTGGGATGGCTCCTGTGGCAAACAACAAT
AGACATTCAGGCACTGAAGAGGGAAGGAGAAGTGGGTGGTCAGACATGGACCCAACGCGA
CGCCAGGCTCCACCACCAGTTATAAATGCCGGCAGCCTAGCGAAGCAGAAGTCCCCTGTT
CGGCCTGAGACATCGACATCCAAAGATGCTGTGTTCGACTTTTTTGGGACGTTCAAGCGG
ATCTTCAAGGCGGCCTGCTGTCTCTAGTAGCCGAGAGCCAAGCACTGAAGCAGAGCAAAC
ACGTAGCCGCACGACTGACGCAAGCCCAGGGGCATTCCAGAGGTCTGGAGCCCCACGGTG
GAGCCCGCAGATGCCTGACTCCTCGGACGGCAGGCGCTCGTCTTCCGGCAGGCGCCACTC
ATCTAACCCGAAGAACTACGAGTCTACCATTAGGGGCATGCAGGGCCTAAACTTCGACGG
CGACGACAGGGTTCACTATTAGCATCTCATCTGTTGTTTGGGACCTGACATGGTGCATCG
TCGGTGCGCTGCCCCCCCATAGGATGCTCCAATGTGTCAAGGCCTAACCGAGATGGAAGT
ACCGAGGGCGGCTGGATAATAAGAGGTTTGGGTGAGTGAGCCTGAGCGCAGTCCGGCTCT
TAGAAACTGTGTTAATGGCTATGCTTAGCCTCCGCTTGTACAGGTTGTCATTTCTTTGAT
TGCGCGTAAGTGAAGGGTGCGGTGTCCCCGTGAATGATGGGTTTATTTTGAGAGGGATTT
CTTGTGGTTCACATTTGATGTGTTGTGCGTGCTGCTTTGGTAGACATTTGGGAGAGGTTT
ATCGTGCCTGCTCTCTCATGTAACTCCAGATTCCTCAACTGCTATATACTATGTTTTTGA
CTCCGTCTCTGAGATGTTATAATGGTGGTCGTGACAGACTCTGTG