Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78529
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:58715447:58721253:1 gene:SORBI_3009G252800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGGGTCCGCGGCCGACGCGGAGCAGGAGCAGGAGCAGAAGCGGGCGGCGGCGGCG
GCGGCGTACGACTACGAGGGCGACGCGCGCTGGGCCGACTACTGGTCCAACGTCCTCCTC
CCGCCGAACCTCGCCTCCCGCCCCGACGTCGTCGACCACTTCAAGCGCAAGTTCTACCAG
CGCTACATCGACCATGATTTGGTCGTTGAGCCGAGGTCATTCACTGGTTCCACTCAGCCC
AGCAGGCCAGATGTAAGGTCTTCGTCTTCGTCATCCAGCGAGAACGTCAGGGCACGTAAT
TCAGGATCTACTTCGAGGTCAGCGCCTTCACCGCCGCCAACAACACAAACAGACAGTGCT
GCCAATCCTTTACGGTTCGATGCACGGACTATACATTTCTCCATCAACGCATGGATACTT
GTGGTTTCTGGTCTGGGAATGCTTCCTATTTTGCCAAAACACCTTGCTGACCGAGCTTGC
AAACTTTCACTGCTGGGAACAATACTTTCGTCAGGATATTCTCTATACAGCACTTATGGG
AAACCAAGAGCATGGAACATGCCAGCAATTCAAGCTTGGTTGCAGTCTGTTCTTGCAACC
AAGGATTTTATCCGTTTAATGTTCTCTTCTATGCTCTTCACATCTCAATTGCACTTGAAG
ATTGCTGCACTACCTGTGCTTTGCTGGGCGCTTGATCATGTTGCCAGATTCCTAAGGCGT
AACTTTGCTCGATCCTCTTTCTATAGGCAATACCTGGAAGAGCCTTGTCTTTGGGTAGAG
ACAAATAATACTACACTGAGCCTCCTTAGTTCAAATGCTGAAATTGCCTTGGGTTTTCTT
CTGATCATATCGCTGCTCTCGTGGCGCCGGAGCATAATTCAGACATTCATGTACTGGCAG
GTATTGAAGCTGATGTACCATGCTCCTGTGACATCCAGCTATCACCAGAGTGCCTGGGCG
AAAATCGGCAGAATTGTGAATCCGTACATCCACCGCTACGCCCCATTCCTCCAGACGCCC
ATTTCTGCAATCCAAAGATGGTGGTTCAGGTAA

Peptide Sequence

PEP ID

OQU78529
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:58715447:58721253:1 gene:SORBI_3009G252800 transcript:OQU78529 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGSAADAEQEQEQKRAAAAAAYDYEGDARWADYWSNVLLPPNLASRPDVVDHFKRKFYQ
RYIDHDLVVEPRSFTGSTQPSRPDVRSSSSSSSENVRARNSGSTSRSAPSPPPTTQTDSA
ANPLRFDARTIHFSINAWILVVSGLGMLPILPKHLADRACKLSLLGTILSSGYSLYSTYG
KPRAWNMPAIQAWLQSVLATKDFIRLMFSSMLFTSQLHLKIAALPVLCWALDHVARFLRR
NFARSSFYRQYLEEPCLWVETNNTTLSLLSSNAEIALGFLLIISLLSWRRSIIQTFMYWQ
VLKLMYHAPVTSSYHQSAWAKIGRIVNPYIHRYAPFLQTPISAIQRWWFR

Transcript Sequence

Transcript ID

OQU78529
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:58715447:58721253:1 gene:SORBI_3009G252800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCGGCATCGGCATCGCGTGCGCCAGTGCCAAGCTAAAATTCCCCAACTCGCGTCGCGTC
CAGTGTGCGTGCTAGACCCCCGTCCCGTCCTCGTCGCGCGGCCCAAAAGCCCCGCACCCA
ACCCCCAGCCCGGCGAGCGATGGAGGGGTCCGCGGCCGACGCGGAGCAGGAGCAGGAGCA
GAAGCGGGCGGCGGCGGCGGCGGCGTACGACTACGAGGGCGACGCGCGCTGGGCCGACTA
CTGGTCCAACGTCCTCCTCCCGCCGAACCTCGCCTCCCGCCCCGACGTCGTCGACCACTT
CAAGCGCAAGTTCTACCAGCGCTACATCGACCATGATTTGGTCGTTGAGCCGAGGTCATT
CACTGGTTCCACTCAGCCCAGCAGGCCAGATGTAAGGTCTTCGTCTTCGTCATCCAGCGA
GAACGTCAGGGCACGTAATTCAGGATCTACTTCGAGGTCAGCGCCTTCACCGCCGCCAAC
AACACAAACAGACAGTGCTGCCAATCCTTTACGGTTCGATGCACGGACTATACATTTCTC
CATCAACGCATGGATACTTGTGGTTTCTGGTCTGGGAATGCTTCCTATTTTGCCAAAACA
CCTTGCTGACCGAGCTTGCAAACTTTCACTGCTGGGAACAATACTTTCGTCAGGATATTC
TCTATACAGCACTTATGGGAAACCAAGAGCATGGAACATGCCAGCAATTCAAGCTTGGTT
GCAGTCTGTTCTTGCAACCAAGGATTTTATCCGTTTAATGTTCTCTTCTATGCTCTTCAC
ATCTCAATTGCACTTGAAGATTGCTGCACTACCTGTGCTTTGCTGGGCGCTTGATCATGT
TGCCAGATTCCTAAGGCGTAACTTTGCTCGATCCTCTTTCTATAGGCAATACCTGGAAGA
GCCTTGTCTTTGGGTAGAGACAAATAATACTACACTGAGCCTCCTTAGTTCAAATGCTGA
AATTGCCTTGGGTTTTCTTCTGATCATATCGCTGCTCTCGTGGCGCCGGAGCATAATTCA
GACATTCATGTACTGGCAGGTATTGAAGCTGATGTACCATGCTCCTGTGACATCCAGCTA
TCACCAGAGTGCCTGGGCGAAAATCGGCAGAATTGTGAATCCGTACATCCACCGCTACGC
CCCATTCCTCCAGACGCCCATTTCTGCAATCCAAAGATGGTGGTTCAGGTAAAGAGACAG
GCGGGTAAAAAAACATGTATCTGTTGCTGAATCACTGAACCGCCTGGGTGGTTTAAGATG
GGCTACACAGAACATAGCACAGCCTCCGCGTTCGTATGTAATGCTGCAGCAGTGCACTGT
ATAATATAACATTTGCGGGATGACTGATATCCCAGAATTCTGGAGGGCCTTATCGTAACA
AGAAGGTTTGCTGTATGTCTGTAAACTATGAGGTTGCAGGGATGACCATTGACCAACAAT
GCTGAATTGCAATCCGTGGGCTAACGTAACTATGTTCCATGCTTTTCAGTCACACAATCC
ACTGGCAGTATATGTACATTAGTTGTTGGACACCAACGCCTTCGTACAGCCCACAGATTT
GCTTATTATTTGCTTTGACGGGGTATTATGAGCCTGTTCGTTTAATTTTATCTATTGAAT
TTGCTAGCCATTTAGCAGTGTTTTTATCTCACAATAAATAAGTTAAAGTACACTTTAAGC
CATGACTTGAACAGGCTGTGCAGAGGTTATAAGGGAATCTCCTTGGTTCAACCCGGAATC
TGTAGTGTGTGACGTTCTATGCATTTTGGATCAACCCGCAGTCTGCAGGATTTGCCTTGT
GATGAGATTTTTTATTTTTTATTTTTTGAGAAACTGTTGCTGTTGTAATGAGATGAGATG
GCAGGCCTTTTTGGTGTTGCCTTCTTTGCCCTGGGCTTGATGCCAAGGCGTCAGTTTAAG
GTCTTGTTTGGATGTAGTCGGATTCGCATCAATCCATATGTGTTGGAGTGGATTGGAGTG
GAATTTAAATTAAATTCCACTCCAATCCACTTCAATACACGTGGATTGAGGTGAATCCGA
CAACTTTCAAACAAGGCCTAAGTTGGATCCAGCCCAAATATTACGACCCGCTGCTGGGCA
GCCATCCGTCTCCTCCGAGGAATCTGAAAACCCTAAATACCATTCGTCTCCTTCCCCGCC
GCCGTCAGCAGGCCAGAGTTCCAGACCAACCCCCGCACACGCCGCCGCCAGCACACACCG
TTTCAGTTCCAGCGCATCGTACCCTCACCGATGAAGTGCAAGCTGCTCCGCCTCCGCCCC
AACCTATCCAGACCACGCGGCCGAGATGCTCTCGGAGCTTCTGCCCTGCCGTGCGGGAGC
AATTCGTCGAACAGCTTGAGGCGCGCCGGCCGGGCAACCCGGGCGTCAGCCACGCACTCC
AGCTGTTCGACGAATGCCTCCTCCACGCCAGGCAATGCCACGGCTACCCCCGCCTTCAAC
CACTTCCTCGCCCATGTGTTCGCCACTTTCTGGACGGGTTGCAAGGTGGATAGAAACGGA
TATTTGCTTCTATAGGGCAGGCTGATGTATATCTATATGATTTGCAGGCTCATCGCCAAT
TACAGGTCCAGCATGCCTCTTCCTTCGGGGTTACCATTCGTCGTCTCATCTCTACCGCCA
GTTTAAGATGAGAACATGAGTTTTTCTTTCGTCGTCTGATCTCCACCACTAGTTTAAGAT
GAGAACATGAGTTCTTTTGTGGATGATGACCAGAAAGATGAGATTGAAAAGGTGAAGCAT
TTTGAGCTTCTTGCTCTTCCTGCTCATATGTCTTCTGAAGATCCGAAAAAACTGTTTTGA
GTAGGTTGGGGAAGTTCTGGATGTGAATACTGCCTCCTTTCTTTGGTTTGGGGTTCGCGT
TTGTTTTATTCTGCAATTCATTGTTACATTTTTATGCAAGTGCCAATGCAAGAAGTTGCC
TTTAAAGGTTTAAATTCTGAGTTGATCTTCGTGTTAAACCATGCCAGTGATTTGTTGCTA
TATTTATATTGTTTTCTATTGCAAAATGATGAATAAGCATCTGATAGAGCAGAGATCTTC
CCAAGACAGGAGCAGGAAACTAAGTTGAAAAATGTGTTCCTCTATACATTTTTGTTTAGT
TTTTTGAAGCACTGTTAGACAAGCAAAATACATGGATGTATGACAACTCACATCCGCTTG
TTATTATTAAAAAGTTCTGAATTTAAAATACAACCTTGTGATCAGTTTGAGACATAACAT
GGTACAAGGTTATCTGATTACATTTACATCCGCTGCTGAGTGGAAAATGCAGAACCTTAT
TTATACTTCCAGAAACCAGAACTGTTGTGTTCGTTTATACTTCCAGAAACCAGAAATGCA
CATGGTGGTGGATTATGTTTTCATAATTTATCGAGGAACCTTTCTAAAATATTTTTGAGC
CCAAATTGTCCAAGCCTACCCAACTTGCCTGTGGCTTAATGCCTTTGTTGATTCCATATT
ATCCAAACTTAGTCTTGCAACCCAAAGAATGTGAATACATGCTAGTACTTGTTGGTTACT
AGTTACACTTGATGAACTCTTATATATATTGTGCTTTGATACTAGCTAGATGTCTAGACC
CTATTATTTTTTGTTCTTGTTACAGGAATAGGGGAGTCTCTTACAAGCTTAAGAACAGAC
CATTGTTGGTAATGCACTCCATGATTTGACACGTGATGATTTCATAAATGCAGCGGAAGA
ATTTTGAGCTGTTGCAGTGATATTTCCATCTTTCATATTTTGCCTTCGTCTTTTGCCAGA
CCACAGCCTGCAGGGCAGCATTTTATGCCTGTGGCTTCACCTTGGGCCACAGCAAGGTGG
CAGTGGTAGCTGCAGTTGCAGTGTTGGATCCAGCTCGGATGGAAAGCGGCAGAGGGGAGT
TGATATAGCAACAACAGCTGAAGGAGTGTGACAACGTCCATATTGATGCTTGCAGATGTT
GCTGGTAGCACTCAGAAGTTAGACCCTCAGTGCCTAGCACTTTGAGTATTTCCGTTGCAT
TACCATGCTGGGTACGTATTAGATAATGTTGGAAACTGTACTCTAGTAATTTTC