Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78516
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:58621804:58625772:-1 gene:SORBI_3009G251200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAATTCTAAGGCTAATGGGAGCATAAAGAAGGCAGGGAGGGGTGATCATCTCCATGGA
GGGCCAAACTGGGTTCTTGTTGCTGGAGGCATTTTGCTCAGCACACTCTCAGTCAGACTT
GGGTGCAGATTGAAGCAACTGTTTGAAACCAAGCAGCAAAACCCTTCTACCAAAGCCAAA
AGAAGGCCTGGGGCATTTGAACTGCATTCCAACCTCTACAGGTTCAGTGACCAACCTAGC
TGCCATTGTTACATGTCAGGGCATGCTGATGGTGAAGTGGAGCTCAAGCAAGCGCCTTCA
AGTCCTATACCTAAATCAACTGAACCATCCAATCTTCTTGTGAAGATACCAACACTAGAA
TCAAGCAAAGAGAACAGTGGTATCATGTGGTCATCATCGCCTGACCGGCTTGAAGATCCT
CGCAAAGCAACATTTCAGTACTCAAACTGCTCAGGCTCTCCCTCCATTTCAGAATCAGGA
TCCGACATTTATAGCAAGCGAGAGGTCATACAGAAGCTGAGGCAGCAGCTCAAGAGACGT
GATGAGATGATCATGGAGATGCAAGCTCAGATCGCGGAGCTTAAGAACTCTCTGGCCATC
CAGGCGACTGAGAACACCGGTTTGCAGTCCCAGCTGGATGCCACGAACCGAGATCTGTTT
GAATCAGATAGGGAGGTTCAGCATCTAAGGAAGATCGTCGCAGATCATTGCGTTGCGGAC
TCGCTCTCGCTTGATAAACCTTTTCACGCTGGACAGTGGCAGACGAATGGCACCAATGGG
CACGCTAATGGTTATTCTGACAGCAGCATGGATGACCCTGAGGTGCACTGTAATGGTATA
GAGAAGAGGAAAGGAGAGGCAGAGAGGATGGAGATGCTAAGGAAAGAGGTGGGTGAGCTG
AAGGAAGTTATCGAGGGGAAAGATTTCCTCCTCCAGAGCTACAAGGAGCAGAAGGTGGAG
CTCTGCTCAAAGATCAGAGAACTGCAGGAAAAGCTCTCAGCTCAAGTGCCGAACATCTTG
TAG

Peptide Sequence

PEP ID

OQU78516
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:58621804:58625772:-1 gene:SORBI_3009G251200 transcript:OQU78516 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNSKANGSIKKAGRGDHLHGGPNWVLVAGGILLSTLSVRLGCRLKQLFETKQQNPSTKAK
RRPGAFELHSNLYRFSDQPSCHCYMSGHADGEVELKQAPSSPIPKSTEPSNLLVKIPTLE
SSKENSGIMWSSSPDRLEDPRKATFQYSNCSGSPSISESGSDIYSKREVIQKLRQQLKRR
DEMIMEMQAQIAELKNSLAIQATENTGLQSQLDATNRDLFESDREVQHLRKIVADHCVAD
SLSLDKPFHAGQWQTNGTNGHANGYSDSSMDDPEVHCNGIEKRKGEAERMEMLRKEVGEL
KEVIEGKDFLLQSYKEQKVELCSKIRELQEKLSAQVPNIL

Transcript Sequence

Transcript ID

OQU78516
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:58621804:58625772:-1 gene:SORBI_3009G251200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCACGTTCTTATTTGGATTGGTGGCAATTAGGATGCAGTAACAGCTTGGCGGCAGTACGT
ATATGTGTTTTTGTTTTATCCTTCGCGACCTGTCCTTCCAAATTTAGACGCCTTTTAAGG
TTAATTAATCCATCCGTAGGTTTTCCATTGGTAATCCAACTGCCTAGGGTCTTTCCGGGG
GGAAAAAGATCATGAATCATCCAATCGGACCCTCGTTATCATTTGATCAAACCCTTTTGA
TGCATCCAGTTCCTGTGTTTTTAGCAATTTCCACTTGTACTTATGAATTTAATCGTCTCT
TGAGCCATATTCATTCCGGACTTTAGGATGCATATATATGTTGGTGGATCATTTCTTTCT
CCTGCGTGAACATGGGAACCGTGTTGACATTGGTAATCCTATCCATATGCATATGTAGGC
GAAGCTGCAGACACTAATCTGAAGAAAATCAGTGGTTCTTAAGATGAATTCTAAGGCTAA
TGGGAGCATAAAGAAGGCAGGGAGGGGTGATCATCTCCATGGAGGGCCAAACTGGGTTCT
TGTTGCTGGAGGCATTTTGCTCAGCACACTCTCAGTCAGACTTGGGTGCAGATTGAAGCA
ACTGTTTGAAACCAAGCAGCAAAACCCTTCTACCAAAGCCAAAAGAAGGCCTGGGGCATT
TGAACTGCATTCCAACCTCTACAGGTTCAGTGACCAACCTAGCTGCCATTGTTACATGTC
AGGGCATGCTGATGGTGAAGTGGAGCTCAAGCAAGCGCCTTCAAGTCCTATACCTAAATC
AACTGAACCATCCAATCTTCTTGTGAAGATACCAACACTAGAATCAAGCAAAGAGAACAG
TGGTATCATGTGGTCATCATCGCCTGACCGGCTTGAAGATCCTCGCAAAGCAACATTTCA
GTACTCAAACTGCTCAGGCTCTCCCTCCATTTCAGAATCAGGATCCGACATTTATAGCAA
GCGAGAGGTCATACAGAAGCTGAGGCAGCAGCTCAAGAGACGTGATGAGATGATCATGGA
GATGCAAGCTCAGATCGCGGAGCTTAAGAACTCTCTGGCCATCCAGGCGACTGAGAACAC
CGGTTTGCAGTCCCAGCTGGATGCCACGAACCGAGATCTGTTTGAATCAGATAGGGAGGT
TCAGCATCTAAGGAAGATCGTCGCAGATCATTGCGTTGCGGACTCGCTCTCGCTTGATAA
ACCTTTTCACGCTGGACAGTGGCAGACGAATGGCACCAATGGGCACGCTAATGGTTATTC
TGACAGCAGCATGGATGACCCTGAGGTGCACTGTAATGGTATAGAGAAGAGGAAAGGAGA
GGCAGAGAGGATGGAGATGCTAAGGAAAGAGGTGGGTGAGCTGAAGGAAGTTATCGAGGG
GAAAGATTTCCTCCTCCAGAGCTACAAGGAGCAGAAGGTGGAGCTCTGCTCAAAGATCAG
AGAACTGCAGGAAAAGCTCTCAGCTCAAGTGCCGAACATCTTGTAGCAATAGCACTCACA
AAACGTTACACGGACCAGCAGTGGATCTCTGATACAATAAACAGGTGGTTTTCGCAGGGA
AGCTCTCGACAGATATCGCCAAAATCTTTCTAAGTTCTTTGCAGAAAGTTAGGTTGATTA
GTTTTCTCATGTTTTAGCCACGATGTCTAGTTTCTCTGGTGTGTTTTTGCCCTCTCCTGC
TAGGTTCTAGGAAGGGTTTATTTTTCGTCATCCGTTTGTTTTCTAGACCTAGGTAGTTCA
ATCAATGGTGAACTTGGTGCATAAGGTATCTGTACAGGTTTTTGATTAGCAGACAGTTGT
GAGCTGTGCCTCCTCGTGTGGCGAGAAATTTGCAATCCTGGAATGCAACTCTGCTGTTTT
GCTTGATTGGTGCATATGTGAATTCAGTAGTTTCGCCCCTTCCATTTTTAAGATCGCGTA
CAGTAGAAAATTTCCGCATGGCACGTCACGAGTAATTTCAGTCTTCTTGCTTGCTTGCTT
GCCAAGCACAATATCAATGGCATTACATTATGCCATTGTCAGCAATATTGCTATGTGTTT
ATTTATTATTACTATTACAGCCCTGAAACCTGCCATTTGAGTGGGCCCTTTTGTCTGTGG
CGCTGGATTTGCTGTGGTGGCAAGTGCAGGACCGAAGGATGCGTATGGTTTCTTCTTCTC
CAATGGTTGAGCACCATGGCAAGTGTAGACAGACAAGGCTGGATTTCACTCCCTCTGCTG
TCTGCTCTGCCTCTCTGCTCCTCCCAACTGGACTGGAGGCGATCATCTCATCCATCACTG
GAAATTGGAAGGCCAAGATCTCACTGATCGGCGCCAACTCCCTGATGAGATCCCAGCCCT
CCATGGCTCCATCCAAGGCAGCACACTTTCTGATTCCATTGTTGAGCTTGAGCTTGAGGC
TTGAGCCCTCCAGTTTTTTAGCTCCCCCCCGGCAGCCGTGCATTCATTCATTCAACCAGA
CAAACGGACATGGACTCTTCACTCTTGCACAGTGCAGTGCACAGCTCGTCGGCGTCGGCA
AGCACACACAAGTACAAGAGGCAACAACAGTGGATCGGATGTGCGTCGTCGACGACATGT
GTGGCCACGTCGCTGCCACAGGCCCACAGAACACACAGGTAGGTACGCCATTTGACTGGT
GAGAGGGCAACTACTCAGGTCGTCGTCGTCCCCGGATTGCTGGCATGCATGGCAGATGAC
CGGCAAGAGCAAGAGCAGCCAGGGTTACAGCTGCGAGCTCAGTGACTAGAGTCAGCAGCC
TCGGAAGCCCGTAAGGCCTTGTTTTAGGTAAAAAGTTTTTTTTTTTATAGCGTAACACTT
TTGCTTGTATTTGTTAATTATTATCTAATCATAGACTAACTAGATTTAAAAAATTCGTCT
TACAAATTACATGTAAACTATACGATTAGCTATTTTTTCTATCTATATTTAAGCCTTATT
CGTTTGGCTGATAACTTATGGCAGAAAATATTAATGGCTGATTGGTTAAAAAAAACACTA
TTGAATAAATGTTCAAATCTCCTTCTTTCCCGTCAGGTCCAGCTTCGAGTCGTCGACTGG
ACCCATGCTCGGTTGGTGACACTCGGATCGGAAGGTCCGGAAGGACGACAAACAAAGACG
GGTCGGGTCCCCCATAGTGTTCGGATCAGTAGCACGCGCACGCAGGCTGTCCGATGGCCA
CACGCGTGCAATCAGAGCCGTCCATCACGCCACCCGACGTCCCCCAGGCGTCCAGCTGGC
CGGCCAGTGGGCATGCATGCGCCCATCCCATGAGTGACAGCGTGTGCGGTGGGCCCACCC
CACGTCCGCGCCCACACGGCCCAGTCTCTGTGAGCTGGAGCCGGAAGAAACAACGGCGGC
AGTAGTGCGAGTGCCCCTGCCCACACGGCACTGCCGTTCCATTGTGCAGACACGTCGACG
CCGGCCGGTCAGCTAGTCCAACTGTCATCTCCGTAAATAGTTTTATTTTTTTTTACAAAA
TGAACATTATATCAATTTCGTTTGTATTTGATAAATATTATCTAATTATAGACTAACTAT
ACTCAAAAGATTCGTCTCACAAGGTAAGACTGTGCAGTAAGTTATTTCTTTTATATATAT
TTAGGCCTTGTTTAGTTCGGAAAACTTTTTGGTTTT