Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78515
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:58602779:58605953:-1 gene:SORBI_3009G251100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGAGGCCGACCGTGACCGGATGCGCCTCCGCGCCGCCGCGCTCACGCTGCACGAC
GCCGGCGCCAGGGACAAGCCGGACCGGAAAGCCGACGTCTTCGCGGATCTCGGTTCGCCG
GTCTCGCCGCTGCGCCTGCGCCCGGCAGCAGCCACGCCCTCGTCCTCGTCCTCCTCCGCC
GGCTCCGCCAAGTCGCCGGCGCCGGGCAATGCGGCCATGGGGAGGGGAGCTCGGGGGAGC
CACTCGGGCGAGCTGGCGCCGGAGACCACCAATCCGCCGCGCCCGCCTGGCCACCGCCGC
TCCGGATCTGGCCCGCTCATTTTCTCCGGCGCCAGCAGCAGCGCCGGCAGCGTCGGAGGA
GGAGGGGGAGGCGGCGGGAGCGGGAGCGGGAGCACCGCCAGCTCGCCGCTCACCAATGCG
CTCCCCACAGGCAACATCTGCCCGTCCGGCCGCGTCGCGGGGGCGGCAGCGGCCGCCACG
CAGCCGCCGCGCGCTCGCCCAGTCGTGCTCGGATCCGGCACCGGCCACTACGGCCACGGC
AGCATCATGCGCGGTGGTGGAGCGGCTCCCGCGAGGACTAGCGTTGACGCGGCCCCGCTG
CTCCACAGCAACAACTCCTCGAGGTCCCCGGCGAGCTGCCCTGCGCCGCCGGCCACCAGC
GGTGGTCTGCAGGAAATCACGCGCGCGGGGAACGAGTGGTACAAGAAGGGCCGCTACGCC
GAGGCGCTGCGGCACTATGACCGTGCCGTGGGGCTGTGCCCCGACAGCGCAGCGTGCCGC
TGCAACCGCGCCGCCGCGCTCATCGGGCTCGGCCGCCTAGCAGAAGCGTTCCGCGAGTGT
GAGGAGGCTGTCCGCCTCGATCCGGCCAGCGGCCGTGCGCACGGCCGCCTCGCCGGATTA
TGCCTCCGGCTTGGGATGATTGAGAAGGCAAGGACGCACTTCACACTGGCTGGAAGTGTA
AACCAGTCTGATCCTGTTGAGTGGCAGAAGCTGCATGAGGTGGAAATCCATCAAGGGAGA
TGCATGGATGCAAGGAAAATTGGAGATTGGAAGAGTGCACTCAGGGAAGCCGATGCAGCC
ATTGCTATTGGAGCGGACTCCTCTCGATTGCTTCTTGCTTTGAGGTCGGAAGCACTGCTT
CGGTTGCACAAATTAGAGGAAGCTGATTCGACTATTACAAGCTTATTGAAATTGGATAAT
GCATCATTGCCTTCAACACCAACCAAAGTCTCAGGCATGTCAGCTGACTCTTATGTCCAT
ATCGTCCAAGCCCAGGTCAACATGGCATTTGGAAGGTTTGATTCAGCTGTTGCACTGTCT
GAGAAGGCTAAGCTTATTGATCGTGTGAGCTCAGAGGTTGAAGTGATCCTAAATAACGTG
AGATTAGTCGCAACGGCTCGAGCCCAGGGGAATGACCTTTTTAAGGCAGGCAAGTTTGCT
GAAGCATCTGTAGCCTATGGTGAAGGGCTGAAATATGAGCCCTCAAATCCAGTACTATAC
TGCAATCGGGCAGCTTGCTGGTCAAAGCTGGGTCGGTGGGCACAAGCTGTCGAGGACTGC
AATGAGGCCCTAGGAGTCCAACCTAACTACACAAAGGCTCTGTTAAGACGTGCAGCGTCC
TATGCAAAGCTTGAACGTTGGGCTGATTGTGTGCGGGACTATGAGGTGCTTCGCAAGGAT
CTTCCTGGTGACACGGAGGTTGCAGAGTCCTTGTTCCATGCCCAGGTTGCATTAAAGACA
GCCCGTGGAGAGGAGGTATCCAATATGAAGTTTGGAGGGGGAGTTGAAGAAATTACCAGC
TTAGAGCAACTCCAAGATGCTATCCATTCACCCGGTGTATCCGTTCTTTACTTTATGGCT
ACATCGAACAAGCAATGTGCACAAATTACCCCATCTGTGGACTCCCTTTGCTCTGAGTGC
CCTGCAGTGAATTTCCTGAAGGTAAATGTTGACGAGAGCCCTCAGCTAGCAAGGGCAGAG
AATGTGCGTGTAGTCCCAAGCTTCAAGATTTACAAGGATGGCACGAGAGTGAAGGAGATG
ATCTGCCCTAGCTTACAGGTCTTGCGCTATTCCGTGAGGCATTATGCTGTCTCTAGTTCT
TGA

Peptide Sequence

PEP ID

OQU78515
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:58602779:58605953:-1 gene:SORBI_3009G251100 transcript:OQU78515 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEADRDRMRLRAAALTLHDAGARDKPDRKADVFADLGSPVSPLRLRPAAATPSSSSSSA
GSAKSPAPGNAAMGRGARGSHSGELAPETTNPPRPPGHRRSGSGPLIFSGASSSAGSVGG
GGGGGGSGSGSTASSPLTNALPTGNICPSGRVAGAAAAATQPPRARPVVLGSGTGHYGHG
SIMRGGGAAPARTSVDAAPLLHSNNSSRSPASCPAPPATSGGLQEITRAGNEWYKKGRYA
EALRHYDRAVGLCPDSAACRCNRAAALIGLGRLAEAFRECEEAVRLDPASGRAHGRLAGL
CLRLGMIEKARTHFTLAGSVNQSDPVEWQKLHEVEIHQGRCMDARKIGDWKSALREADAA
IAIGADSSRLLLALRSEALLRLHKLEEADSTITSLLKLDNASLPSTPTKVSGMSADSYVH
IVQAQVNMAFGRFDSAVALSEKAKLIDRVSSEVEVILNNVRLVATARAQGNDLFKAGKFA
EASVAYGEGLKYEPSNPVLYCNRAACWSKLGRWAQAVEDCNEALGVQPNYTKALLRRAAS
YAKLERWADCVRDYEVLRKDLPGDTEVAESLFHAQVALKTARGEEVSNMKFGGGVEEITS
LEQLQDAIHSPGVSVLYFMATSNKQCAQITPSVDSLCSECPAVNFLKVNVDESPQLARAE
NVRVVPSFKIYKDGTRVKEMICPSLQVLRYSVRHYAVSSS

Transcript Sequence

Transcript ID

OQU78515
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:58602779:58605953:-1 gene:SORBI_3009G251100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGAGGCCGACCGTGACCGGATGCGCCTCCGCGCCGCCGCGCTCACGCTGCACGAC
GCCGGCGCCAGGGACAAGCCGGACCGGAAAGCCGACGTCTTCGCGGATCTCGGTTCGCCG
GTCTCGCCGCTGCGCCTGCGCCCGGCAGCAGCCACGCCCTCGTCCTCGTCCTCCTCCGCC
GGCTCCGCCAAGTCGCCGGCGCCGGGCAATGCGGCCATGGGGAGGGGAGCTCGGGGGAGC
CACTCGGGCGAGCTGGCGCCGGAGACCACCAATCCGCCGCGCCCGCCTGGCCACCGCCGC
TCCGGATCTGGCCCGCTCATTTTCTCCGGCGCCAGCAGCAGCGCCGGCAGCGTCGGAGGA
GGAGGGGGAGGCGGCGGGAGCGGGAGCGGGAGCACCGCCAGCTCGCCGCTCACCAATGCG
CTCCCCACAGGCAACATCTGCCCGTCCGGCCGCGTCGCGGGGGCGGCAGCGGCCGCCACG
CAGCCGCCGCGCGCTCGCCCAGTCGTGCTCGGATCCGGCACCGGCCACTACGGCCACGGC
AGCATCATGCGCGGTGGTGGAGCGGCTCCCGCGAGGACTAGCGTTGACGCGGCCCCGCTG
CTCCACAGCAACAACTCCTCGAGGTCCCCGGCGAGCTGCCCTGCGCCGCCGGCCACCAGC
GGTGGTCTGCAGGAAATCACGCGCGCGGGGAACGAGTGGTACAAGAAGGGCCGCTACGCC
GAGGCGCTGCGGCACTATGACCGTGCCGTGGGGCTGTGCCCCGACAGCGCAGCGTGCCGC
TGCAACCGCGCCGCCGCGCTCATCGGGCTCGGCCGCCTAGCAGAAGCGTTCCGCGAGTGT
GAGGAGGCTGTCCGCCTCGATCCGGCCAGCGGCCGTGCGCACGGCCGCCTCGCCGGATTA
TGCCTCCGGCTTGGGATGATTGAGAAGGCAAGGACGCACTTCACACTGGCTGGAAGTGTA
AACCAGTCTGATCCTGTTGAGTGGCAGAAGCTGCATGAGGTGGAAATCCATCAAGGGAGA
TGCATGGATGCAAGGAAAATTGGAGATTGGAAGAGTGCACTCAGGGAAGCCGATGCAGCC
ATTGCTATTGGAGCGGACTCCTCTCGATTGCTTCTTGCTTTGAGGTCGGAAGCACTGCTT
CGGTTGCACAAATTAGAGGAAGCTGATTCGACTATTACAAGCTTATTGAAATTGGATAAT
GCATCATTGCCTTCAACACCAACCAAAGTCTCAGGCATGTCAGCTGACTCTTATGTCCAT
ATCGTCCAAGCCCAGGTCAACATGGCATTTGGAAGGTTTGATTCAGCTGTTGCACTGTCT
GAGAAGGCTAAGCTTATTGATCGTGTGAGCTCAGAGGTTGAAGTGATCCTAAATAACGTG
AGATTAGTCGCAACGGCTCGAGCCCAGGGGAATGACCTTTTTAAGGCAGGCAAGTTTGCT
GAAGCATCTGTAGCCTATGGTGAAGGGCTGAAATATGAGCCCTCAAATCCAGTACTATAC
TGCAATCGGGCAGCTTGCTGGTCAAAGCTGGGTCGGTGGGCACAAGCTGTCGAGGACTGC
AATGAGGCCCTAGGAGTCCAACCTAACTACACAAAGGCTCTGTTAAGACGTGCAGCGTCC
TATGCAAAGCTTGAACGTTGGGCTGATTGTGTGCGGGACTATGAGGTGCTTCGCAAGGAT
CTTCCTGGTGACACGGAGGTTGCAGAGTCCTTGTTCCATGCCCAGGTTGCATTAAAGACA
GCCCGTGGAGAGGAGGTATCCAATATGAAGTTTGGAGGGGGAGTTGAAGAAATTACCAGC
TTAGAGCAACTCCAAGATGCTATCCATTCACCCGGTGTATCCGTTCTTTACTTTATGGCT
ACATCGAACAAGCAATGTGCACAAATTACCCCATCTGTGGACTCCCTTTGCTCTGAGTGC
CCTGCAGTGAATTTCCTGAAGGTAAATGTTGACGAGAGCCCTCAGCTAGCAAGGGCAGAG
AATGTGCGTGTAGTCCCAAGCTTCAAGATTTACAAGGATGGCACGAGAGTGAAGGAGATG
ATCTGCCCTAGCTTACAGGTCTTGCGCTATTCCGTGAGGCATTATGCTGTCTCTAGTTCT
TGA