Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78513
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:58587079:58592970:-1 gene:SORBI_3009G250900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTTGCGATGGTGCCGTGAAGGACCAGGACCAGGAGACCGCGGCGGCGAGCACTGCG
TCAGCGGCATCGGTGGTGGCGGCGTCGGAGGCGTCTCCCGCGCCGGTCGTGGTGGTGGTC
AGCGCAAGGCCCTCGGCGAGGTCGTCGCCGCACGATAAGCGCCTCGGCGTGCGCCACCCC
TTGAAGCACCGCCGGTTCCGTGCCGGGGGGAAGATGATGGTGGAGCCCGGAGGGGTGCCG
CCCGCTCACGCCGTGCCGGAAGGCGAGGAGGAGGAAGAGGAAGAGGAGGAGGGAGCCAGC
GAGGTGGAAGAGGAGGAGTTGGTGGAGGCAGAGGCGGAGCAGGCCTCGTCCGCAGGGACG
GCGATGCGGGGCACTGAAGTGGAGGTATCGTCCGCGCCGGCGGCAGGGGTACAGGAGATG
GAGGTGGAGGTCGAGGGCGGAGAAATGGAGGTGAAGTATGGAGAAATGGAGGTGTCGCCA
GAGCCTGCGGTCGCTGTTGGGGGAACCGAGTTGGAGGCCCATCCGGACGAGGAGGACGAG
GTCTCGTCCATTTCTGTGGCACGAGGGGAGAAGAAGCAGGAGGCCGCCTCTCCTCCTCCT
GCCGCTTCTGCCGTTCTAGCTGTGGAGGCGCCCAGGGAGATGGGTCAATATGGGGAGAGG
GCGGAGAAGGAGAGGAGGGACAAGGAGAGGGAGAGGCAGAAGGAGCGGGAGAGGGTGGAT
GAGGTCGGCTACATGAGCGGTGGATGGAAGAGTGTTGATGGAACGCTGAATTGTGGATAT
TCAAGTTTTAGAGGAAAAAGGGCAAGCATGGAAGATTTCTATGATATAAAATCATCTAAA
ATTGATGATAAACAAATTAATCTCTTCGGAATTTTCGATGGTCATGGTGGTTCACGTGCT
GCTGAGTATTTGAAGGAGCACTTGTTTGAGAACCTCATGAAACATCCGGAGTTCATGACA
AACACAAAATTAGCAATAAGTGAAACGTATAGGAAGACCGATTCAGAGTTTTTGGATGCT
GAAAGGAATACTCATAGAGATGATGGGTCAACAGCATCAACAGCAGTGTTGGTTGGTGAC
CATCTTTACGTGGCAAATGTTGGAGACTCAAGGGCTGTTATATCAAAGGCTGGCAAAGCG
ATTGCGCTCTCTGAAGATCACAAGCCGAACAGAAGTGATGAGAGAAAACGAATTGAGAGT
GCTGGTGGGATAGTTATGTGGGCTGGAACTTGGAGGGTAGGTGGCGTACTTGCGATGTCT
CGGGCATTTGGCAATCGTCTCTTAAAACAATTTGTTATTGCAGACCCTGAGATTCAGGAC
GCCGTTACACTTGTGAAGATGGAGGAGGAACCTGAGGCAGCAGCCCGGAAGCTGACAGAG
ACGGCTTTCTCCCGTGGGAGCGGTGATAACATCACGTGCATCGTGGTGAAGTTCCAGCAT
GACAAGCCAGGTAGCAGCGGCGGCGGCGATCCCCCCTCTTCGCCTCCAGGCGACAAGAGT
TGA

Peptide Sequence

PEP ID

OQU78513
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:58587079:58592970:-1 gene:SORBI_3009G250900 transcript:OQU78513 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVCDGAVKDQDQETAAASTASAASVVAASEASPAPVVVVVSARPSARSSPHDKRLGVRHP
LKHRRFRAGGKMMVEPGGVPPAHAVPEGEEEEEEEEEGASEVEEEELVEAEAEQASSAGT
AMRGTEVEVSSAPAAGVQEMEVEVEGGEMEVKYGEMEVSPEPAVAVGGTELEAHPDEEDE
VSSISVARGEKKQEAASPPPAASAVLAVEAPREMGQYGERAEKERRDKERERQKERERVD
EVGYMSGGWKSVDGTLNCGYSSFRGKRASMEDFYDIKSSKIDDKQINLFGIFDGHGGSRA
AEYLKEHLFENLMKHPEFMTNTKLAISETYRKTDSEFLDAERNTHRDDGSTASTAVLVGD
HLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGIVMWAGTWRVGGVLAMS
RAFGNRLLKQFVIADPEIQDAVTLVKMEEEPEAAARKLTETAFSRGSGDNITCIVVKFQH
DKPGSSGGGDPPSSPPGDKS

Transcript Sequence

Transcript ID

OQU78513
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:58587079:58592970:-1 gene:SORBI_3009G250900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGGCGCTTCTGTCTTCTCCTCTTCTTCTCTCAGGACAGGAGGAGCGGCAGCGGCAGGCT
TCATTCATCCGATCTCTCCTCTCACCTCACCTCACCTCACCTCACCTCACGCTCTCTCCC
TCCCCCGATCACTCCCCTCCCTCCTCACCTCCAGCTCACACACCCACCGCCCCACACTTC
CCACTCAAATCCAGGGCCACGCCATCGCACGCAGATCCACAGCCTCCCCGATCCGGTCGC
CTCCGCACACGCCCGATCGGATCCCGCAGGTGAGCGCCCTTCCCCCCATTGGCCCCGGCG
CGCCGTGCTCGCTCGCATCTGATGATGCTGCTGCTGCTCATGCTGGTATCCTGCTGCTAG
GGTTTGTGCCCGCCGCGAGTTAGATGGTTTGCGATGGTGCCGTGAAGGACCAGGACCAGG
AGACCGCGGCGGCGAGCACTGCGTCAGCGGCATCGGTGGTGGCGGCGTCGGAGGCGTCTC
CCGCGCCGGTCGTGGTGGTGGTCAGCGCAAGGCCCTCGGCGAGGTCGTCGCCGCACGATA
AGCGCCTCGGCGTGCGCCACCCCTTGAAGCACCGCCGGTTCCGTGCCGGGGGGAAGATGA
TGGTGGAGCCCGGAGGGGTGCCGCCCGCTCACGCCGTGCCGGAAGGCGAGGAGGAGGAAG
AGGAAGAGGAGGAGGGAGCCAGCGAGGTGGAAGAGGAGGAGTTGGTGGAGGCAGAGGCGG
AGCAGGCCTCGTCCGCAGGGACGGCGATGCGGGGCACTGAAGTGGAGGTATCGTCCGCGC
CGGCGGCAGGGGTACAGGAGATGGAGGTGGAGGTCGAGGGCGGAGAAATGGAGGTGAAGT
ATGGAGAAATGGAGGTGTCGCCAGAGCCTGCGGTCGCTGTTGGGGGAACCGAGTTGGAGG
CCCATCCGGACGAGGAGGACGAGGTCTCGTCCATTTCTGTGGCACGAGGGGAGAAGAAGC
AGGAGGCCGCCTCTCCTCCTCCTGCCGCTTCTGCCGTTCTAGCTGTGGAGGCGCCCAGGG
AGATGGGTCAATATGGGGAGAGGGCGGAGAAGGAGAGGAGGGACAAGGAGAGGGAGAGGC
AGAAGGAGCGGGAGAGGGTGGATGAGGTCGGCTACATGAGCGGTGGATGGAAGAGTGTTG
ATGGAACGCTGAATTGTGGATATTCAAGTTTTAGAGGAAAAAGGGCAAGCATGGAAGATT
TCTATGATATAAAATCATCTAAAATTGATGATAAACAAATTAATCTCTTCGGAATTTTCG
ATGGTCATGGTGGTTCACGTGCTGCTGAGTATTTGAAGGAGCACTTGTTTGAGAACCTCA
TGAAACATCCGGAGTTCATGACAAACACAAAATTAGCAATAAGTGAAACGTATAGGAAGA
CCGATTCAGAGTTTTTGGATGCTGAAAGGAATACTCATAGAGATGATGGGTCAACAGCAT
CAACAGCAGTGTTGGTTGGTGACCATCTTTACGTGGCAAATGTTGGAGACTCAAGGGCTG
TTATATCAAAGGCTGGCAAAGCGATTGCGCTCTCTGAAGATCACAAGCCGAACAGAAGTG
ATGAGAGAAAACGAATTGAGAGTGCTGGTGGGATAGTTATGTGGGCTGGAACTTGGAGGG
TAGGTGGCGTACTTGCGATGTCTCGGGCATTTGGCAATCGTCTCTTAAAACAATTTGTTA
TTGCAGACCCTGAGATTCAGGACGCCGTTACACTTGTGAAGATGGAGGAGGAACCTGAGG
CAGCAGCCCGGAAGCTGACAGAGACGGCTTTCTCCCGTGGGAGCGGTGATAACATCACGT
GCATCGTGGTGAAGTTCCAGCATGACAAGCCAGGTAGCAGCGGCGGCGGCGATCCCCCCT
CTTCGCCTCCAGGCGACAAGAGTTGATTCCATTTGTTGTTGGTTATACGTGTTGTTGGGG
TCCTTTTAACCTGAGCCGGATTTTGCTGGCCCCATCCATGGTGGCCCCCGCGGCTGGTAC
TTAAGAAAGGAGTTGGTTCATGTTCGTTGCCTGTCTATATATGCCCTTAATTTTGGTTCT
CCGGTCAGTAGGGTTACCGGTGGCGGTGCTGCCCATTTGCATGTTTATCGTCTGTTCATC
ATCCTATGCGGCATTGCTGTAGACTTTGTAGTTGCTGCTGTATCAATGAGAGTTGATTCT
GTGAGGTGCAGGGATGGGT