Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78395
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:56601555:56606204:1 gene:SORBI_3009G223500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGATTTACTTGGGAGTAGATATGATAAGCAAGAAGATTTTCAAGTTCTGTTGAGC
AAGAAAGATCCTGGAGAACCACCTCGGCACAAGCATTACCTGTGGATGGCACACTGGACC
AAAGCAAGCAGCAGTGCAGAAGCCCGAAACAACAATGGCAGCAATCCTTTGGAGGATATC
AACAAGGGCACTACTACGAAAGATGGTGAGACCTTGCCTTATGAATTCATGAAATCTACA
GTTGCTGAAAGGCTCATGGTAGGAGTAAGCCGTGGAAGTGCCTCCATGCAGCATGCCCGG
CAGTTCAATTCTAGTATGTGGGGTATGGCACGCCATGTTTCCAATGAATTGGGACCAAAG
AATAGCGAACAGGTTGATGAGTCTTTTGAAAAATCTATGAAGCACGATGCTGTGAACTTG
AGAGCTAGAGCAGTTGTGTCAGAAACATATTCTATTCACAAGCTTTCAGAGTTACCGTTG
GATTTTCAAGACCTTGGGAGCTCAGATGATCCAAGTCCAGATTGGAGCCACTTTCCAATG
TTCGAAATTAATCGAAAGATTGACAGTATTCTCAACCGTAAACGAAAGTCTGCAGCACTT
GGTCCTGCACCTCTGAATCTAAATGTGTCTGCATCCCATGTGATGGCCCTATCGTCACAG
GAATACATGATGCACTCACATCAAATAGCTGACAAGAACATGGATACGTGCAAACCTGCA
GAAGGCTTTGCATCTCACATAGAAGATCCTGCTGGCCTCAACTCAGATCCTTCAGGGCCA
AAGTTAAAGGGACAATTATTGGATACCATGTCATGTTCTTGCAGCAAGGACGACAACAAC
TCAGCAGATTGTCCAATAGATGAGCAGCATACAAGCCACTATTTTGCAAACTCAAAGCAT
GAACTACCCTATGTATCTAACGAAAAGGAGTTCAAGTTTGCAGGAAACAGCCACAATCGA
ATGGTTTCAAGTGCGGCCCACAATCTGAAGACAAGAAGATCTGCTGTCTGTAAACAACAA
AGTGCTGCAGAGGCAATGTTCTGTGAACCAGTACTTGGTAGTGAGTTTCAGAATGAACCA
ATAACTATTTGTACCATGGGCAAGAAGGATGGTGAAAATTTTCATGAGATGTATAAATCT
CGTGGCAAGGCCGTTTCATGTTCTTTGTTACCTTATGAGCATCATCGTCATCTGAAAGCA
CAGAGAACGGAATCTGCAGGAAATTTGAAAGTCTGCGCGTTACCTGATCAAACTGCAAAT
AAATTGACAGAAAAGAGTAATGGTGAGCTGCTGGCATATGGAGCAAAGTCAAAGGAAATG
TATACAGGTTCTTGTAACCGAAGAAGGCCCTATTTATTTGAAAAGTTAACGATTCCTTCC
AAATCACAAAGTGCATATCCTAAAAATTCTGCGTCTTCAGGAAAATCTAGCGGCTTTGGA
GTTTGTATGTACGGCACCAATATTGGCAGTCGGTTATTCGGAGAACAGAATCAATCTTCA
GCTAAGACTGAAACATTACACAGTGATACTCTTATTGGGTCCAAATCCTCAGCAGGACTA
CGGTTGTCCAGACAAAGCAAAAAGTGA

Peptide Sequence

PEP ID

OQU78395
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:56601555:56606204:1 gene:SORBI_3009G223500 transcript:OQU78395 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSDLLGSRYDKQEDFQVLLSKKDPGEPPRHKHYLWMAHWTKASSSAEARNNNGSNPLEDI
NKGTTTKDGETLPYEFMKSTVAERLMVGVSRGSASMQHARQFNSSMWGMARHVSNELGPK
NSEQVDESFEKSMKHDAVNLRARAVVSETYSIHKLSELPLDFQDLGSSDDPSPDWSHFPM
FEINRKIDSILNRKRKSAALGPAPLNLNVSASHVMALSSQEYMMHSHQIADKNMDTCKPA
EGFASHIEDPAGLNSDPSGPKLKGQLLDTMSCSCSKDDNNSADCPIDEQHTSHYFANSKH
ELPYVSNEKEFKFAGNSHNRMVSSAAHNLKTRRSAVCKQQSAAEAMFCEPVLGSEFQNEP
ITICTMGKKDGENFHEMYKSRGKAVSCSLLPYEHHRHLKAQRTESAGNLKVCALPDQTAN
KLTEKSNGELLAYGAKSKEMYTGSCNRRRPYLFEKLTIPSKSQSAYPKNSASSGKSSGFG
VCMYGTNIGSRLFGEQNQSSAKTETLHSDTLIGSKSSAGLRLSRQSKK

Transcript Sequence

Transcript ID

OQU78395
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:56601555:56606204:1 gene:SORBI_3009G223500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGATATTTTCCGCTGGCGATCGGCCGTACGCTCCCCATCCGACGCCTCCGTTGCCGCCA
CCGCGTCGCCGGCGCAACCGATGGCCGCCTTTTTGAGGACGTGGCCCAGGCGGCTTCGCT
TTTCCCTGTTCCTCCCTTCCTCTCCCATCCCCGTCTCCTGAGCTGGGGGGACTGGCTGAC
CAGTGACCAGCCCTCTCCCACCTCGCACGCCTGTGGCTGTGGCTCCTGACCTTTTCCACC
ACCGGAGTTAATGCCTCCGCCTCTCCGTCAGCGCCGCCTCGGCTCGCCGTCTCGCTGTGC
GCGGCGTGGGTCGTGGTAGCAGTACCGCGCGCGTGGTGGTTGGGGCCTTTGGGGATGGGC
GGAACTGGCGGCCGCGAGGTGAGGTGAGGTGAGGAGTGGAGATTGAGGGGGGAGCTGTTG
TGGCGCGTGTCTCCCTGTCGCCCACAGCTTCTTTTTATTCCTCCCCGCCCGGTTCCGTTC
CGGGGAATGGATTCTGGGGAGGAGGAATTCTGAGCCACGGGGGAGGGAGGGAGGAGACGC
GGCTGCTTTGATCCCTTGCCGCCTCGGCTCTCGTACGTAGTACGTTCTCGTCGTCGTGGC
GCGTGGCGGCGCAATTTGGGTGAGTCCATGCTTACCTTCTCCTGCCATTCCGGCCTTGGA
TTTTTTTTTGGCTGTGTCTTCCCACGGTCTAGGAGCGAGCGTTGCGAAGGAAACCTTGGC
TCCTGGATGCTCGTTGTTCCTTTTTTTTCCGTGCTTTTATGTGGCGGTAATTCTCAGTTT
TTGGCAGCGGCGTGCGTGTTCCTTGCCTAGATTGGCGTGATCCAATTCTGGTCCAACTGA
GAGGCGTAGAGGTGCCCGCCGCAGAACACGAGCGCATGCTTGGTGCTTGCTAAGGTAAAT
CTGTTTCACCTTTTGTTTGTTGATCAGGTGCTACTAGATCCATTTGATTGATGCAGTCAT
TTTTGGGTGTTCTGTCTGGAAATTGGAAATCGGGTTAACATCACGCTTCCTGTTTTTCTG
AAGAGTTTGTATCGCAAGGGCATATACCATGTAGGAGTACCAACTCTGTGTGATGGAAAA
CTTCCTATTAGGTTCCTCTCCTACCAATATATACACTCCAAACTTTACTAGTTCTAGTGA
ATCTCCAGCGCGATTGATCAGCTGGATTTAAAAGTGGAGTTGTATATAAACAACTTACAA
CTCTAGTTGAACTTCTGACCCTTCTCTGTTTTCCGGATTTACCAGTTTCTGCATCGTTTC
TTCTGTCATCAGGACTTAAAAGGATCTCGTTGTTTCTGATTATGTTCTCCTTTGCGTCCT
TGACAGATAGAAGCATCTGCAATCATCATTCCTGGTTTGCGAGCAAACTCATTTACTTTA
ATCATGTCGGATTTACTTGGGAGTAGATATGATAAGCAAGAAGATTTTCAAGTTCTGTTG
AGCAAGAAAGATCCTGGAGAACCACCTCGGCACAAGCATTACCTGTGGATGGCACACTGG
ACCAAAGCAAGCAGCAGTGCAGAAGCCCGAAACAACAATGGCAGCAATCCTTTGGAGGAT
ATCAACAAGGGCACTACTACGAAAGATGGTGAGACCTTGCCTTATGAATTCATGAAATCT
ACAGTTGCTGAAAGGCTCATGGTAGGAGTAAGCCGTGGAAGTGCCTCCATGCAGCATGCC
CGGCAGTTCAATTCTAGTATGTGGGGTATGGCACGCCATGTTTCCAATGAATTGGGACCA
AAGAATAGCGAACAGGTTGATGAGTCTTTTGAAAAATCTATGAAGCACGATGCTGTGAAC
TTGAGAGCTAGAGCAGTTGTGTCAGAAACATATTCTATTCACAAGCTTTCAGAGTTACCG
TTGGATTTTCAAGACCTTGGGAGCTCAGATGATCCAAGTCCAGATTGGAGCCACTTTCCA
ATGTTCGAAATTAATCGAAAGATTGACAGTATTCTCAACCGTAAACGAAAGTCTGCAGCA
CTTGGTCCTGCACCTCTGAATCTAAATGTGTCTGCATCCCATGTGATGGCCCTATCGTCA
CAGGAATACATGATGCACTCACATCAAATAGCTGACAAGAACATGGATACGTGCAAACCT
GCAGAAGGCTTTGCATCTCACATAGAAGATCCTGCTGGCCTCAACTCAGATCCTTCAGGG
CCAAAGTTAAAGGGACAATTATTGGATACCATGTCATGTTCTTGCAGCAAGGACGACAAC
AACTCAGCAGATTGTCCAATAGATGAGCAGCATACAAGCCACTATTTTGCAAACTCAAAG
CATGAACTACCCTATGTATCTAACGAAAAGGAGTTCAAGTTTGCAGGAAACAGCCACAAT
CGAATGGTTTCAAGTGCGGCCCACAATCTGAAGACAAGAAGATCTGCTGTCTGTAAACAA
CAAAGTGCTGCAGAGGCAATGTTCTGTGAACCAGTACTTGGTAGTGAGTTTCAGAATGAA
CCAATAACTATTTGTACCATGGGCAAGAAGGATGGTGAAAATTTTCATGAGATGTATAAA
TCTCGTGGCAAGGCCGTTTCATGTTCTTTGTTACCTTATGAGCATCATCGTCATCTGAAA
GCACAGAGAACGGAATCTGCAGGAAATTTGAAAGTCTGCGCGTTACCTGATCAAACTGCA
AATAAATTGACAGAAAAGAGTAATGGTGAGCTGCTGGCATATGGAGCAAAGTCAAAGGAA
ATGTATACAGGTTCTTGTAACCGAAGAAGGCCCTATTTATTTGAAAAGTTAACGATTCCT
TCCAAATCACAAAGTGCATATCCTAAAAATTCTGCGTCTTCAGGAAAATCTAGCGGCTTT
GGAGTTTGTATGTACGGCACCAATATTGGCAGTCGGTTATTCGGAGAACAGAATCAATCT
TCAGCTAAGACTGAAACATTACACAGTGATACTCTTATTGGGTCCAAATCCTCAGCAGGA
CTACGGTTGTCCAGACAAAGCAAAAAGTGAGCAGCTGGCAGCTCCATCCAAGAGAGGAGA
TTCAGGATACAGCAAAGAAGATGGAACCCATACTGTCAATGAAGGTCATGATGTTTCGTC
CAAAGCAACCATTGGTAGTAAGCAACCGTGCATGCCCGGAACAGGAATCACGAACCTAGA
TCTCATACTTTCCCAAATGAGCAGAATGAGAAATCAAATTTCCCGTGGTATAATTCAACC
ACCAATAGGTGCCGAGCCAAGTGATAGATGGCTCAAGCGCCTACAGCTTGACATATCAGA
TCCTGACATGCCTGGTTCCAAGAGGCCAAAAATTGGAGACAGTCCTCCACTCAGGCAAAG
AAATCGTTCTTTTGACATGGCACTTCCTTGCAACAGGACTGACACTGAAGCAATCGATCG
TGTTAAGGAGGACCAAAGCTTGGATGAAGGGAAAAAATTGCAAGAACAGCAAGAAAGAAC
CCCAATTCTAGAGAAGAGCGTGAATAGTTGGATAGGAAGATGGTGCCAGGGTGGCACTCC
TGTTTACCATGAAGACCCAGGCCAGGGAAGGCAAGGAACAAAGCCTGGCCGGTCATCCGA
AGAACTTGAAGGTCAGTTCCCAAGCATTGCAGCGATGGCGATGATGGGGCGAGCGATGAA
CAAGCTTCGGCCATGCGAGCATCAGAAGAAGGGGCCATTTGTGGTGTGGAAGACAGATTG
ACCTTTGTGTATACGTTTTTGGGTGTAATATACCGGTTTCTTTCCAGAAAGTAAATGTAA
AGCAACTGTGAAGTTTGCCTGGCAGTGGTTCATGGTTTATTTTTTTTTTCTGAAGTGAAA
GTAGCTAAGTGTAGTGTCTACCGATGGTGTAATGGTTTAATATACCAATCATATAATAAT
ATACTCTTCACTGTGCCGTTATGAATTATGATGGTGTGTTGGGGCCTCAGCTGAAGGGCA
T