Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78386
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:56351137:56353958:1 gene:SORBI_3009G220000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGACGACCCACGCCGCCTCCATGTCGTTCCTCCTCTCCCACCCGCAGTCGCGC
TCCGCCACGCCAAGCCGCCACCTCCAGCTCCGCCCGGCAGCCCGCCGCGTCCGCTGCTGC
GCCACCGACGCCACCGCCGCCGCCCCCGCAGCCACCACCAAGCACCGGCGCGCGGCGGAT
GAGAACATCCGCGAGGAGGCGGCGCGGCACCCGGCCCCGAAGCAGGGCCTCTCCGCGTGG
TACGAGCCCTTCCCGCCGGCCCCGAACGGCGACCCCAACGAGCGCTACTCCCTGGACGAG
ATCGTCTACCGCTCCAGCTCGGGGGGCCTCCTCGACGTGCGCCACGACATGGAGGCGCTG
GCCCGCTTCTCCGGCGCCTACTGGCGGGACCTCTTCGACTCCCGCGTCGGCCGCACCACC
TGGCCCTACGGCTCCGGCGTCTGGTCCAAGAAGGAGTTCGTGCTCCCCGAGATCGACCCG
GACCACATCGTCTCCCTCTTCGAGGGCAACTCCAACCTCTTCTGGGCCGAGCGCCTCGGC
CGCGACCATCTCGGCGGGATGAACGACCTCTGGGTCAAGCACTGCGGCATCTCCCACACG
GGCTCCTTCAAGGACCTCGGCATGACCGTGCTTGTCAGCCAGGTCAACCGCCTCCGCCGC
GCCCCGCTGTCGCGCCCCATCGCCGGCGTCGGCTGCGCGTCCACGGGGGACACCTCCGCC
GCGCTCTCCGCCTACTGCGCCGCCGCGGGGATCCCGGCCATTGTCTTCCTCCCTGCCAAT
CGCATCTCGCTGGAGCAGCTCATCCAGCCCATCGCCAACGGCGCCACCGTGCTTTCCCTC
GACACCGACTTCGATGGCTGCATGCGGCTCATCAGGGAGGTGACTGCCGAGCTGCCTATC
TACCTTGCCAATTCGCTTAATTCCCTCCGGCTGGAGGGGCAGAAGACAGCGGCCATTGAG
ATACTGCAGCAGTTCGATTGGGAGGTGCCCGATTGGGTGATTGTGCCGGGAGGCAATCTG
GGGAACATATATGCGTTCTACAAGGGATTTGAGATGTGCCGTGTTCTTGGGCTTGTTGAT
CGTGTGCCGCGGCTTGTCTGTGCACAGGCAGCCAACGCAAACCCGCTCTATGGCTATTAC
AAGTCAGGCTGGACCGAGTTCCAACCTCAGGTGGCCAGACCAACATTTGCATCAGCGATT
CAGATCGGTGACCCGGTGTCTGTCGACCGAGCTGTGGTCGCGCTCAAGGCAACGAATGGC
ATTGTCGAGGAGGCCACAGAGGAAGAGCTCATGAACGCAATGTCACTCGCTGACCGCACT
GGGATGTTTGCTTGCCCACATACTGGGGTTGCGCTCGCCGCCCTGTTCAAGCTCAGGGAC
CAGCGCATCATCGGGCCAAATGATCGCACGGTGGTCGTCAGCACAGCTCACGGCCTGAAG
TTCTCGCAGTCAAAGATCGACTACCATGATAGTAAGATCGAGGACATGGCTTGCAAGTAC
TCCAACCCGCCTGTGAGCGTGAAGGCTGACTTTGGCGCCGTCATGGATGTGCTGAAGAAG
AGGCTCAAGGGTGCTAGTTTTTAG

Peptide Sequence

PEP ID

OQU78386
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:56351137:56353958:1 gene:SORBI_3009G220000 transcript:OQU78386 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAATTHAASMSFLLSHPQSRSATPSRHLQLRPAARRVRCCATDATAAAPAATTKHRRAAD
ENIREEAARHPAPKQGLSAWYEPFPPAPNGDPNERYSLDEIVYRSSSGGLLDVRHDMEAL
ARFSGAYWRDLFDSRVGRTTWPYGSGVWSKKEFVLPEIDPDHIVSLFEGNSNLFWAERLG
RDHLGGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRRAPLSRPIAGVGCASTGDTSA
ALSAYCAAAGIPAIVFLPANRISLEQLIQPIANGATVLSLDTDFDGCMRLIREVTAELPI
YLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFEMCRVLGLVD
RVPRLVCAQAANANPLYGYYKSGWTEFQPQVARPTFASAIQIGDPVSVDRAVVALKATNG
IVEEATEEELMNAMSLADRTGMFACPHTGVALAALFKLRDQRIIGPNDRTVVVSTAHGLK
FSQSKIDYHDSKIEDMACKYSNPPVSVKADFGAVMDVLKKRLKGASF

Transcript Sequence

Transcript ID

OQU78386
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:56351137:56353958:1 gene:SORBI_3009G220000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGCCGCCGCCAGCTTTTTCCCCACCATGGCGGCGACGACCCACGCCGCCTCCATGTCGT
TCCTCCTCTCCCACCCGCAGTCGCGCTCCGCCACGCCAAGCCGCCACCTCCAGCTCCGCC
CGGCAGCCCGCCGCGTCCGCTGCTGCGCCACCGACGCCACCGCCGCCGCCCCCGCAGCCA
CCACCAAGCACCGGCGCGCGGCGGATGAGAACATCCGCGAGGAGGCGGCGCGGCACCCGG
CCCCGAAGCAGGGCCTCTCCGCGTGGTACGAGCCCTTCCCGCCGGCCCCGAACGGCGACC
CCAACGAGCGCTACTCCCTGGACGAGATCGTCTACCGCTCCAGCTCGGGGGGCCTCCTCG
ACGTGCGCCACGACATGGAGGCGCTGGCCCGCTTCTCCGGCGCCTACTGGCGGGACCTCT
TCGACTCCCGCGTCGGCCGCACCACCTGGCCCTACGGCTCCGGCGTCTGGTCCAAGAAGG
AGTTCGTGCTCCCCGAGATCGACCCGGACCACATCGTCTCCCTCTTCGAGGGCAACTCCA
ACCTCTTCTGGGCCGAGCGCCTCGGCCGCGACCATCTCGGCGGGATGAACGACCTCTGGG
TCAAGCACTGCGGCATCTCCCACACGGGCTCCTTCAAGGACCTCGGCATGACCGTGCTTG
TCAGCCAGGTCAACCGCCTCCGCCGCGCCCCGCTGTCGCGCCCCATCGCCGGCGTCGGCT
GCGCGTCCACGGGGGACACCTCCGCCGCGCTCTCCGCCTACTGCGCCGCCGCGGGGATCC
CGGCCATTGTCTTCCTCCCTGCCAATCGCATCTCGCTGGAGCAGCTCATCCAGCCCATCG
CCAACGGCGCCACCGTGCTTTCCCTCGACACCGACTTCGATGGCTGCATGCGGCTCATCA
GGGAGGTGACTGCCGAGCTGCCTATCTACCTTGCCAATTCGCTTAATTCCCTCCGGCTGG
AGGGGCAGAAGACAGCGGCCATTGAGATACTGCAGCAGTTCGATTGGGAGGTGCCCGATT
GGGTGATTGTGCCGGGAGGCAATCTGGGGAACATATATGCGTTCTACAAGGGATTTGAGA
TGTGCCGTGTTCTTGGGCTTGTTGATCGTGTGCCGCGGCTTGTCTGTGCACAGGCAGCCA
ACGCAAACCCGCTCTATGGCTATTACAAGTCAGGCTGGACCGAGTTCCAACCTCAGGTGG
CCAGACCAACATTTGCATCAGCGATTCAGATCGGTGACCCGGTGTCTGTCGACCGAGCTG
TGGTCGCGCTCAAGGCAACGAATGGCATTGTCGAGGAGGCCACAGAGGAAGAGCTCATGA
ACGCAATGTCACTCGCTGACCGCACTGGGATGTTTGCTTGCCCACATACTGGGGTTGCGC
TCGCCGCCCTGTTCAAGCTCAGGGACCAGCGCATCATCGGGCCAAATGATCGCACGGTGG
TCGTCAGCACAGCTCACGGCCTGAAGTTCTCGCAGTCAAAGATCGACTACCATGATAGTA
AGATCGAGGACATGGCTTGCAAGTACTCCAACCCGCCTGTGAGCGTGAAGGCTGACTTTG
GCGCCGTCATGGATGTGCTGAAGAAGAGGCTCAAGGGTGCTAGTTTTTAGGTGGTATCTT
TTAGACTTCAAAATTTATGTTTGGGGTAGGCTATCTGTTTGAGTTTAGCAGGGAGTGGCT
ATCTCTTGCAAGACCGGGAGTGGTTACCTCTTGTACTATGATGTGTTCCATGGAGAATAA
GTGATCGTGTTGCTGTTGGATTGAATAATCATCACTCGCTCGTCTGCCCTTTGTGCATGA
ACTTGTCGAGTACTTTGGCTCTTAACTGATCATTTTGGTGTTGCAATGCTAGCTGAAGCT
ACTGCTACTGGTGATAATGAATGTCATCATTGTTGGTTTTGCCAGTCTGGTAGTGAGTTT
TCGTTGCAGATTTGATGCTTGAATTTTGGTTGGTGGTCAATTACCATGATTTGCGCTAAT
CATCGTGATTCAAAGTAGATATTCGTGTGTATATGTATCACATCCAGACATCCTAGATGC
CGTTGCAAATATGCGAAGCCGACAATAGCATGACTGCCAATAAGGTCCAATCAAGTATGA
TTATGACCGTGGTCCAAAGTGGAGTAATCTGGTATCCTCTTCTATGGAAAATGGTAGATA
ATTTGGATTTGGTGATTTTGTTTTGTTTTGGTGGCACATCGGTGCTTGTTTTCAGTTTAT
AGCAACCTACTCAATGGTTAAATGCCAGTTATGATTTTTTTTTTGTTGATGTGACATGGA
ATTAGTGAGTGTATAGATGCGAAAGTTATATCGAGCTTGTTTGGCACAGCTCAACTTCAA
CTTCATTAGTAAAACTGTTTTTTTAGGCTTTATGAGTGACTTTCTAGATGAAGCTGAGCA
ATAGTTTCACAAACTACTTCATGCATAGTTGAGAGAGAGAAATGAGAGAGAGAGCTACAA
TAAGCTACTTTTTTTCAGCTTCATCCCAACTTATGTCTTTGTGAGAGGAGGAGAAAAATA
GCTTCACCCATGAAGCTGTTTTGGAAATAAGTGTTTGGCAAAAAAAAAAAAACAGCTCAC
AACAGCTCATGAAGCGGCTGTTGTGAGCTGTACCAAACACCCCCATCATCTTGAAGATAC
AGCTTGTTCATAACATTCAAGATTAGAGAAATCCTG