Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78190
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:52997680:53001114:1 gene:SORBI_3009G174700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCTCCCTCCTGCCCCCCGCAGCCACCCTCGTCAAGAAGTACCCAGCTCTCCTC
CACCCGTCCGGCGCCAAGCCGCACGCCCAGAGGCTGATCTTCAGGTGCGGCGCCACCAGT
GCGGACGATGGCTGGGCGTCCTTAGTGGACGAGCTCAAGAGGTCGCTGCAGCAGGCGGAC
ACGTCCGACACGGTGACCAGCAACGCGGGAGCGGGTGTCACACCGAACGACCTCGTGACC
GCGCTGCCACTGGAACCTTCCACCACCACCGGACCGGCGGTGGGAGACGCGACTAGTGCC
GCCGCCGGCGCGGTGAACGAGCTCCTGGGCGTGGACGCGGCCAGCAGCGACGGTGGCGGC
GCGGCCGCCATCCCCGACGGGCTCCTGAGCGCGCTGCTGCACCTGGACGCGTCGTCCAAC
CCGGTGGCGCGCGCGGCGGGCGGCGCGCTGTCTGGCCTGGACGCGCTCACGTCGGGGCTG
TCGGACGCGCAGCGGTGGGCGCTGTTCGGGTTCCTGGCCGCGACGTGGCTGTACCTGACG
GCGCGGCCCGGGGTGCTGAGCGGCGCCGTGGACACGTACGTGCTGGCGCCGCTGCAGCTG
GCGCTGGACAGCGTGCTGGGCCGGCGGAGCCTCAAGATGAGCGACTTCGTCGTCGGCGAG
CGCATCGGGGAGGGATCCTTCGGGGTGGTGTACGCCGGCGCCGTGGTGCCCAAGGACGGC
ACCGTCGTGGAGGAGCGGTCCGGCAGGGCCAGGACGACCCTCCAGAACGACGACAGGTAC
AAGGAGAAGGTCATACTCAAGAAGATCAAGATGCTGACGGTGGGGGCGAAGGAGTGTGGG
GACTATGAGGAGTGGTTCAACTACCGCGTGGCCAGGGCGGCGCCGGAGTCGTGCGCCGAC
TTCCTCGGGAGCTTCGTCGCCGACAAGAACAAGGCAGAGTTCGTCAAGGGTGGCAAGTGG
CTCGTCTGGAAGTTTGAGGGGGACAGAACGTTGGCCAATTATATGAGTGACCGCGGGTTC
CCGTCGAACCTGGAGCGGCTCATGTTCGGACGCGTGCTGCAGGGTCTGCGCACCCAGGAG
CGCGACGCGCTGGTGGTGAAGCAGGTGATGCGGCAGCTGATCACGTCGCTGAAGCGCATC
CACGCGACGGGCATCGTGCACCGCGACATCAAGCCGTCCAACCTCGTCGTCACCCGCCGC
GGCCAGGTGAAGCTCATCGACTTCGGAGCCGCCACCGACCTCCGCATCGGCAAGAACTAC
GTGCCCGACCGCGCCCTGCTCGACCCGGACTACTGCCCGCCCGAGCTCTACGTGCTCCCC
GAGGAGACGCCGGAGCCCCCGCCGGAGCCCATCGCCGCCATCCTCTCCCCGATCCTCTGG
CAGCTGAACAGCCCGGACCTGTTCGACATGTACTCGGCGGGGATAGTGCTGATGCAGATG
GCCATACCGACGCTGCGGACACAGTCGGGGCTCAAGAACTTCAACGCCGAGCTCAGGTCC
GCCGGCTACGACCTCAACAGGTGGCGGCAGAGCGCGCGGCGGAGACCCGACCTGCAGATC
CTGGACCTCGACTCTGGTCGAGGCTGGGACCTCGCCACCAAGCTCATCTCGGAGAGGGGC
CCCAACGGCGGGGGCCGCCTGTCTGCCGCGGCCGCATTGCGGCACCCTTATTTTCTCCTG
GGTGGCGACCAGGCCGCGGCGGTGCTGTCCAAGTTCTCGCTCAGCAAATAG

Peptide Sequence

PEP ID

OQU78190
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:52997680:53001114:1 gene:SORBI_3009G174700 transcript:OQU78190 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASLLPPAATLVKKYPALLHPSGAKPHAQRLIFRCGATSADDGWASLVDELKRSLQQAD
TSDTVTSNAGAGVTPNDLVTALPLEPSTTTGPAVGDATSAAAGAVNELLGVDAASSDGGG
AAAIPDGLLSALLHLDASSNPVARAAGGALSGLDALTSGLSDAQRWALFGFLAATWLYLT
ARPGVLSGAVDTYVLAPLQLALDSVLGRRSLKMSDFVVGERIGEGSFGVVYAGAVVPKDG
TVVEERSGRARTTLQNDDRYKEKVILKKIKMLTVGAKECGDYEEWFNYRVARAAPESCAD
FLGSFVADKNKAEFVKGGKWLVWKFEGDRTLANYMSDRGFPSNLERLMFGRVLQGLRTQE
RDALVVKQVMRQLITSLKRIHATGIVHRDIKPSNLVVTRRGQVKLIDFGAATDLRIGKNY
VPDRALLDPDYCPPELYVLPEETPEPPPEPIAAILSPILWQLNSPDLFDMYSAGIVLMQM
AIPTLRTQSGLKNFNAELRSAGYDLNRWRQSARRRPDLQILDLDSGRGWDLATKLISERG
PNGGGRLSAAAALRHPYFLLGGDQAAAVLSKFSLSK

Transcript Sequence

Transcript ID

OQU78190
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:52997680:53001114:1 gene:SORBI_3009G174700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACTGTCTCCCCTGTCCCGCGTGGTGGGCATCCATGGGATGAGAGCGCCTTCCTCGCCATG
GCCGCCTCCCTCCTGCCCCCCGCAGCCACCCTCGTCAAGAAGTACCCAGCTCTCCTCCAC
CCGTCCGGCGCCAAGCCGCACGCCCAGAGGCTGATCTTCAGGTGCGGCGCCACCAGTGCG
GACGATGGCTGGGCGTCCTTAGTGGACGAGCTCAAGAGGTCGCTGCAGCAGGCGGACACG
TCCGACACGGTGACCAGCAACGCGGGAGCGGGTGTCACACCGAACGACCTCGTGACCGCG
CTGCCACTGGAACCTTCCACCACCACCGGACCGGCGGTGGGAGACGCGACTAGTGCCGCC
GCCGGCGCGGTGAACGAGCTCCTGGGCGTGGACGCGGCCAGCAGCGACGGTGGCGGCGCG
GCCGCCATCCCCGACGGGCTCCTGAGCGCGCTGCTGCACCTGGACGCGTCGTCCAACCCG
GTGGCGCGCGCGGCGGGCGGCGCGCTGTCTGGCCTGGACGCGCTCACGTCGGGGCTGTCG
GACGCGCAGCGGTGGGCGCTGTTCGGGTTCCTGGCCGCGACGTGGCTGTACCTGACGGCG
CGGCCCGGGGTGCTGAGCGGCGCCGTGGACACGTACGTGCTGGCGCCGCTGCAGCTGGCG
CTGGACAGCGTGCTGGGCCGGCGGAGCCTCAAGATGAGCGACTTCGTCGTCGGCGAGCGC
ATCGGGGAGGGATCCTTCGGGGTGGTGTACGCCGGCGCCGTGGTGCCCAAGGACGGCACC
GTCGTGGAGGAGCGGTCCGGCAGGGCCAGGACGACCCTCCAGAACGACGACAGGTACAAG
GAGAAGGTCATACTCAAGAAGATCAAGATGCTGACGGTGGGGGCGAAGGAGTGTGGGGAC
TATGAGGAGTGGTTCAACTACCGCGTGGCCAGGGCGGCGCCGGAGTCGTGCGCCGACTTC
CTCGGGAGCTTCGTCGCCGACAAGAACAAGGCAGAGTTCGTCAAGGGTGGCAAGTGGCTC
GTCTGGAAGTTTGAGGGGGACAGAACGTTGGCCAATTATATGAGTGACCGCGGGTTCCCG
TCGAACCTGGAGCGGCTCATGTTCGGACGCGTGCTGCAGGGTCTGCGCACCCAGGAGCGC
GACGCGCTGGTGGTGAAGCAGGTGATGCGGCAGCTGATCACGTCGCTGAAGCGCATCCAC
GCGACGGGCATCGTGCACCGCGACATCAAGCCGTCCAACCTCGTCGTCACCCGCCGCGGC
CAGGTGAAGCTCATCGACTTCGGAGCCGCCACCGACCTCCGCATCGGCAAGAACTACGTG
CCCGACCGCGCCCTGCTCGACCCGGACTACTGCCCGCCCGAGCTCTACGTGCTCCCCGAG
GAGACGCCGGAGCCCCCGCCGGAGCCCATCGCCGCCATCCTCTCCCCGATCCTCTGGCAG
CTGAACAGCCCGGACCTGTTCGACATGTACTCGGCGGGGATAGTGCTGATGCAGATGGCC
ATACCGACGCTGCGGACACAGTCGGGGCTCAAGAACTTCAACGCCGAGCTCAGGTCCGCC
GGCTACGACCTCAACAGGTGGCGGCAGAGCGCGCGGCGGAGACCCGACCTGCAGATCCTG
GACCTCGACTCTGGTCGAGGCTGGGACCTCGCCACCAAGCTCATCTCGGAGAGGGGCCCC
AACGGCGGGGGCCGCCTGTCTGCCGCGGCCGCATTGCGGCACCCTTATTTTCTCCTGGGT
GGCGACCAGGCCGCGGCGGTGCTGTCCAAGTTCTCGCTCAGCAAATAGCATCCATCCATG
GCTCATGCCTGGGCAGTGCCGCAGTGGACACCTACAGTATATAATATATATACACATTGG
ATTACTGGAATCCTCCCAACAATTCATCATCGGTGATGGTGTACATTGCGCATTGTTGAA
TCCTTAGCATACCAGTGGGGCAGTGGTCAGCAATGGCACTGTCATTTTTCGCTGTAAAGC
CAATCGTGAGAGGCATCAAGAGGGAGTCATCTGGCAACTGATGTTACAACTTGTT