Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78170
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:52613311:52616367:1 gene:SORBI_3009G170500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCAAGCTCGCGGTAGTCGCGGCCGCGCTCTACGCCATCCTAGTCCTGGCGGTCTCA
CTGCCCGTTCTCGTCACGGCGGCGGAGTGCGACTGCGGCTCGGACGACGCCGCCGCGGCG
GGGCGCCGCGACAAGGCGGGGGCGCTGCGGCTGAAGGTGGTGGCCATCTTCTGCATCCTC
GCGGGTGGCGCGGTGGGCGCGGCGGTGCCGTCGCTGGGGCACGGCAGGCTCCCCGCGCTG
CGGCCGGACGCGGACCTGTTCCTCGCCGTCAAGGCCCTGGCGGGCGGCGTCATCCTCGCC
ACGGGGCTGGTGCACATCCTGCCCGCGGCCTTCGACGCGCTGGGCTCGCCGTGCCTCGCC
GCCGGGCCGTGGAACAGGTTCCCGTTCGCCGGGATGGTCGCCATGCTCGCCGCGGTCGCC
ACGCTCGTGGTGGACACGGTCGCCACGGGGTACTTCCGCCGCCGGACGGTCGCTAGGAGG
AAGGCCGCGGCGGCGGTCGGCGACGAGCCATCGTCGTCGGAGCTCGGGCGTTGCGACGGC
GGGGACCTGGAGGCGGAGGCCTCCGACGACTCCGGCGCGCACCACGGGCACGTGCACGGG
ATGTCCGCGCTCGCACCCGCGCCGACGACGACGACCGTCGACGACGAGCTCGTGCGCCAC
CGCGTCATCTCTCAGGTGCTGGAGCTGGGCGTGGTGGTGCACTCGCTGATCATCGGGATG
TCCCTGGGCGCCTCCGACTTCCCGAGCACGGTGCGGCCGCTAGTCCCGGCGTTGACGTTC
CACCAGCTCTTCGAGGGCATCGGCCTTGGCGGGTGCATCGTCCAGGCCAAGTTCCGCCTC
AGGTCAATGTTAGCGATGGCAGTCTTCTTCTCGCTGACGACCCCGATCGGCGTCGCCATC
GGCATCGGGATATCGTCCGTGTACGACGAGACGAGCCCGACGGCGCTGGTCGTGCAGGGC
TTCCTCGAGGCCGCCGCCGCGGGGATCCTGGTGTACATGGCGCTCGTCGACATCCTCGCC
GAGGACTTCATGAGCGCCCGGGTGCAGAGCAGTGCGCGCCTGCAGCGCATAAGTCTCCGC
CATCGGTGCATCAACAAGATGTGGCACAAAACTATGGGCTGCTGCTAA

Peptide Sequence

PEP ID

OQU78170
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:52613311:52616367:1 gene:SORBI_3009G170500 transcript:OQU78170 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAKLAVVAAALYAILVLAVSLPVLVTAAECDCGSDDAAAAGRRDKAGALRLKVVAIFCIL
AGGAVGAAVPSLGHGRLPALRPDADLFLAVKALAGGVILATGLVHILPAAFDALGSPCLA
AGPWNRFPFAGMVAMLAAVATLVVDTVATGYFRRRTVARRKAAAAVGDEPSSSELGRCDG
GDLEAEASDDSGAHHGHVHGMSALAPAPTTTTVDDELVRHRVISQVLELGVVVHSLIIGM
SLGASDFPSTVRPLVPALTFHQLFEGIGLGGCIVQAKFRLRSMLAMAVFFSLTTPIGVAI
GIGISSVYDETSPTALVVQGFLEAAAAGILVYMALVDILAEDFMSARVQSSARLQRISLR
HRCINKMWHKTMGCC

Transcript Sequence

Transcript ID

OQU78170
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:52613311:52616367:1 gene:SORBI_3009G170500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCAAGCTCGCGGTAGTCGCGGCCGCGCTCTACGCCATCCTAGTCCTGGCGGTCTCA
CTGCCCGTTCTCGTCACGGCGGCGGAGTGCGACTGCGGCTCGGACGACGCCGCCGCGGCG
GGGCGCCGCGACAAGGCGGGGGCGCTGCGGCTGAAGGTGGTGGCCATCTTCTGCATCCTC
GCGGGTGGCGCGGTGGGCGCGGCGGTGCCGTCGCTGGGGCACGGCAGGCTCCCCGCGCTG
CGGCCGGACGCGGACCTGTTCCTCGCCGTCAAGGCCCTGGCGGGCGGCGTCATCCTCGCC
ACGGGGCTGGTGCACATCCTGCCCGCGGCCTTCGACGCGCTGGGCTCGCCGTGCCTCGCC
GCCGGGCCGTGGAACAGGTTCCCGTTCGCCGGGATGGTCGCCATGCTCGCCGCGGTCGCC
ACGCTCGTGGTGGACACGGTCGCCACGGGGTACTTCCGCCGCCGGACGGTCGCTAGGAGG
AAGGCCGCGGCGGCGGTCGGCGACGAGCCATCGTCGTCGGAGCTCGGGCGTTGCGACGGC
GGGGACCTGGAGGCGGAGGCCTCCGACGACTCCGGCGCGCACCACGGGCACGTGCACGGG
ATGTCCGCGCTCGCACCCGCGCCGACGACGACGACCGTCGACGACGAGCTCGTGCGCCAC
CGCGTCATCTCTCAGGTGCTGGAGCTGGGCGTGGTGGTGCACTCGCTGATCATCGGGATG
TCCCTGGGCGCCTCCGACTTCCCGAGCACGGTGCGGCCGCTAGTCCCGGCGTTGACGTTC
CACCAGCTCTTCGAGGGCATCGGCCTTGGCGGGTGCATCGTCCAGGCCAAGTTCCGCCTC
AGGTCAATGTTAGCGATGGCAGTCTTCTTCTCGCTGACGACCCCGATCGGCGTCGCCATC
GGCATCGGGATATCGTCCGTGTACGACGAGACGAGCCCGACGGCGCTGGTCGTGCAGGGC
TTCCTCGAGGCCGCCGCCGCGGGGATCCTGGTGTACATGGCGCTCGTCGACATCCTCGCC
GAGGACTTCATGAGCGCCCGGGTGCAGAGCAGTGCGCGCCTGCAGCGCATAAGTCTCCGC
CATCGGTGCATCAACAAGATGTGGCACAAAACTATGGGCTGCTGCTAAAACACCACCCGA
GCAATCTCTTATAATAGAACCAACACTACTGCAGCCACCATTTTCATCAAAATCAGCATC
AACGTTCACCATGACTTTACCCTCTGGAGGTTTTTTTCATCCCTGTCTTAATATTGAGCT
TTTCTTCGTCGCCAGCTTATAGTTGGTTAGTGCCACAATGGCCATGGTGGACCTTGACGG
TCGTTGGACAGTTTCTCCATGGATTATTGTCGACGCTCCCACCATATATACCAGGCTGCT
GTGATGACTAACTCTGCAAATCCCACCTTGAGGTTCTAGATTTGATAATCCCTTGTGAGA
ATTTCCTCGAGAATTGCACAACCCGATCTGTCAGTTATAATTAGGCATTGTATTTTCTCC
TCGATTCTCAACGAATGCCACACTTGTGTCGCTCGTTCACATGCAAAAATCATGTATTTA
ATATCTTTGGTAGCTGCAATATATGGTGACTGCAATATTATATGGAGTGGTTTCTATGAG
ATATCAATTGAATATTGTAGCAAGGAGGAGAACGAGGTGGCTCATAATTTAGCTAAAAGA
GCTCGGTAATATAAGCAAATTGTACTTGGGTCGATAAGCCCTCTAGCTTTATTCTAGGCT
CTTTGA