Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78109
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:51378228:51384070:-1 gene:SORBI_3009G156000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTACTTTCTATCTGCCACATCATCATTTACCATGCTACTTTCTATCCTATTAATCTT
GCAGGTATGTGGGCTAACAGTCTGAAAGCTGATGACTATCAAGCTCTTCTTGATCGTGGT
TGGAGGAGATCTGGTTGTTTTCTTTACAAACCTGAGATGGAACGGACATGCTGTCCCTCA
TATACGATACGCTTGAAGGCAAATGATTTCATTTGTTCCAAAGAGCAAGGTCGTGTACTT
AAAAAGATGCAAAGGTTCCTTGATGGTGACCTTGATCCACATATTGGAAGTCCCCAGTGT
AAGGCAAGCCCAACAAAGCGCTCACTTGGTGAACCTCTGAATTCACCAACCTCGAAAGTA
TCAAAGGTATCAGCAAAAGAGTTTCGAGCAGGCATGGGTCCAAATATATCGAAAGAAGAC
GACGTCACTTGTTGCCTGGCAAGCAAAATCAATGAGGCCGCAGATACATGCTTCCAAGGG
GGGGTATTTGGTTCAGTTCAACTCCCCAAAGCTATTGTGAAGACTGTTAAACCTCAAGTC
AAAAGGAAAGTAGGAGAATCAGTGCAAGAAAAGAAAGTCGGAGAAGCAGTGCAAGATTTG
GTTTATACGTGCAACATAAGTTTCCAAATAGTGGCAGCAGTTCGACGTGCATTGCCTAAA
GAAAATGGTGCTAATCAAAATGAAGTACTGGCAGATCTTTCTCCAAATTCTGTTGCAGAA
AAGCTATCCATGGCAATGGAACGTCTTGGACAACTAGCTGGTTTTGAAGTAAAAGCTTGT
AATGGGCATCTTAATTTCTATTTGGCCACCAATCAGGCAATGCAGAACCATACCAGCTTT
GTTGTACCTGTGCAAACTTCAGACAAGTCTAGTGGTTCAAAGCAAAGCTCTGTGAACAAA
ACTAATACGAAATATCCTCTGAAAAGAAAAATCCTGGAGATTAGGTTGAGCACATCTCAT
TTTGATCCTGAGGAGTTTGCTCTGTACCGAAGGTATCAGACAAAGGTGCATAAGGAGAAG
ACAGTTACGGAAAGTTCATACAAGAGATTTCTAGTAGATACACCAATCGTGTTTGTCCCC
CCAAAGAGTGGTGATAATTCAGTTCCACCGTGCGGGTTCGGGTCTTTTCATCAGCAGTAC
AGAATTGATGGAAAACTTGTGGCTGTTGGTGTAGTTGATATCCTTCCTAAGTGTTTGTCA
AGCAAGTACTTGTTCTGGGATCCTGACCTTTCTTTCCTATCTCTTGGAAAGTATACAGCT
CTGAAGGAGATAGATTGGGTCAAGACGACACATGAGCACTGTCCCAGCCTTCAGTACTAC
TATCTCGGTTACTATATACATTCTTGCAATAAGATGAGATACAAAGCTGCATATCGACCA
TCAGAACTTCTATGTCCTGTCCGTTACGAGTGGGTTCCCTATGATTTAGCCAAGCCTCTA
CTGGATACCAGTCAATATTCCATTCTATCTGATTATGCTACAATGCAAGGTGAAGTGCCC
CAGCCTCAGATTTGTGGTCCCTCTGATGACTCTTCAGCAAAAATTGACCACCACGACTCA
ACCAGCGATGAGGACGATGATGAAGATTTCAACGACTATGAATCAGATATGATGGTTGAT
GAAGAGACAATTCATTCAGAAAAGCCAGATACAACTGAAGGCAGTTCCAACATAAATGAC
ATAAAAAACATCACCCTGGACCTGAATGGCTCGCGGGTTAAATTTAAGGGCCTTCAGCAA
GTGTTTGGGCCAATCGAGAGGCGACACCTCACTGCGCTAGAAGGGCAACTGAGCAGATAC
GTCAAGGTTGTTGGGAAGGAGCTATCCGATCGAATTGTGTATTGCCTTTCTTGA

Peptide Sequence

PEP ID

OQU78109
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:51378228:51384070:-1 gene:SORBI_3009G156000 transcript:OQU78109 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLLSICHIIIYHATFYPINLAGMWANSLKADDYQALLDRGWRRSGCFLYKPEMERTCCPS
YTIRLKANDFICSKEQGRVLKKMQRFLDGDLDPHIGSPQCKASPTKRSLGEPLNSPTSKV
SKVSAKEFRAGMGPNISKEDDVTCCLASKINEAADTCFQGGVFGSVQLPKAIVKTVKPQV
KRKVGESVQEKKVGEAVQDLVYTCNISFQIVAAVRRALPKENGANQNEVLADLSPNSVAE
KLSMAMERLGQLAGFEVKACNGHLNFYLATNQAMQNHTSFVVPVQTSDKSSGSKQSSVNK
TNTKYPLKRKILEIRLSTSHFDPEEFALYRRYQTKVHKEKTVTESSYKRFLVDTPIVFVP
PKSGDNSVPPCGFGSFHQQYRIDGKLVAVGVVDILPKCLSSKYLFWDPDLSFLSLGKYTA
LKEIDWVKTTHEHCPSLQYYYLGYYIHSCNKMRYKAAYRPSELLCPVRYEWVPYDLAKPL
LDTSQYSILSDYATMQGEVPQPQICGPSDDSSAKIDHHDSTSDEDDDEDFNDYESDMMVD
EETIHSEKPDTTEGSSNINDIKNITLDLNGSRVKFKGLQQVFGPIERRHLTALEGQLSRY
VKVVGKELSDRIVYCLS

Transcript Sequence

Transcript ID

OQU78109
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:51378228:51384070:-1 gene:SORBI_3009G156000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GACCTTCACATTACTTGTTTCATCATTTTCTCCTTTGTTATTTCTTTTTTTGTTGTTCTA
CCTTTCATGTATATACTTGTTTAGAAGGCTTTGCCACATCATCATTTACCATGCTACTTT
CTATCTGCCACATCATCATTTACCATGCTACTTTCTATCCTATTAATCTTGCAGGTATGT
GGGCTAACAGTCTGAAAGCTGATGACTATCAAGCTCTTCTTGATCGTGGTTGGAGGAGAT
CTGGTTGTTTTCTTTACAAACCTGAGATGGAACGGACATGCTGTCCCTCATATACGATAC
GCTTGAAGGCAAATGATTTCATTTGTTCCAAAGAGCAAGGTCGTGTACTTAAAAAGATGC
AAAGGTTCCTTGATGGTGACCTTGATCCACATATTGGAAGTCCCCAGTGTAAGGCAAGCC
CAACAAAGCGCTCACTTGGTGAACCTCTGAATTCACCAACCTCGAAAGTATCAAAGGTAT
CAGCAAAAGAGTTTCGAGCAGGCATGGGTCCAAATATATCGAAAGAAGACGACGTCACTT
GTTGCCTGGCAAGCAAAATCAATGAGGCCGCAGATACATGCTTCCAAGGGGGGGTATTTG
GTTCAGTTCAACTCCCCAAAGCTATTGTGAAGACTGTTAAACCTCAAGTCAAAAGGAAAG
TAGGAGAATCAGTGCAAGAAAAGAAAGTCGGAGAAGCAGTGCAAGATTTGGTTTATACGT
GCAACATAAGTTTCCAAATAGTGGCAGCAGTTCGACGTGCATTGCCTAAAGAAAATGGTG
CTAATCAAAATGAAGTACTGGCAGATCTTTCTCCAAATTCTGTTGCAGAAAAGCTATCCA
TGGCAATGGAACGTCTTGGACAACTAGCTGGTTTTGAAGTAAAAGCTTGTAATGGGCATC
TTAATTTCTATTTGGCCACCAATCAGGCAATGCAGAACCATACCAGCTTTGTTGTACCTG
TGCAAACTTCAGACAAGTCTAGTGGTTCAAAGCAAAGCTCTGTGAACAAAACTAATACGA
AATATCCTCTGAAAAGAAAAATCCTGGAGATTAGGTTGAGCACATCTCATTTTGATCCTG
AGGAGTTTGCTCTGTACCGAAGGTATCAGACAAAGGTGCATAAGGAGAAGACAGTTACGG
AAAGTTCATACAAGAGATTTCTAGTAGATACACCAATCGTGTTTGTCCCCCCAAAGAGTG
GTGATAATTCAGTTCCACCGTGCGGGTTCGGGTCTTTTCATCAGCAGTACAGAATTGATG
GAAAACTTGTGGCTGTTGGTGTAGTTGATATCCTTCCTAAGTGTTTGTCAAGCAAGTACT
TGTTCTGGGATCCTGACCTTTCTTTCCTATCTCTTGGAAAGTATACAGCTCTGAAGGAGA
TAGATTGGGTCAAGACGACACATGAGCACTGTCCCAGCCTTCAGTACTACTATCTCGGTT
ACTATATACATTCTTGCAATAAGATGAGATACAAAGCTGCATATCGACCATCAGAACTTC
TATGTCCTGTCCGTTACGAGTGGGTTCCCTATGATTTAGCCAAGCCTCTACTGGATACCA
GTCAATATTCCATTCTATCTGATTATGCTACAATGCAAGGTGAAGTGCCCCAGCCTCAGA
TTTGTGGTCCCTCTGATGACTCTTCAGCAAAAATTGACCACCACGACTCAACCAGCGATG
AGGACGATGATGAAGATTTCAACGACTATGAATCAGATATGATGGTTGATGAAGAGACAA
TTCATTCAGAAAAGCCAGATACAACTGAAGGCAGTTCCAACATAAATGACATAAAAAACA
TCACCCTGGACCTGAATGGCTCGCGGGTTAAATTTAAGGGCCTTCAGCAAGTGTTTGGGC
CAATCGAGAGGCGACACCTCACTGCGCTAGAAGGGCAACTGAGCAGATACGTCAAGGTTG
TTGGGAAGGAGCTATCCGATCGAATTGTGTATTGCCTTTCTTGATATGCAGCCAGCCAGC
CGGGTCAATTCTACTATGAAAGTGCACATGAGAGCAAAACTTGTTTCATTCAGAAAGAAA
GGTCATAGCTCTGTTATACTGCTGCATGTCTATGCTTGTTTTTTTTGTTGTAGAAGATAC
GAGAGCCCGCTGTCGAGGCTGACATAGAACATTTGTCTGGTCGATTGTGTATG