Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78096
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:51122978:51128518:-1 gene:SORBI_3009G154500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACATTCAGCCACAAGATTGGGTTGTATGATGTCCAAGGTCCGATTCCACTCGTAAAA
AATGTTTTTATTCCTCCGGACTTAGAAGAAGATGGCCTGCCTGTTGCCCTTGAAGATGCC
ATGCCCCTACATTCTTTTTTGGCTCCAGTTGACACATGCAAGGATCGAATTGCTGCTGCT
CTGGAGACACTGCGACCTACATCTTCATGGGAGAGAGGTGCTGCTTCTGGGCAGGAAGAG
GATACTGTTTTGCTCGGAGGACGAGGTTTTGGGACAGCCATGTCTGCTTTAATTGAGTAC
CTAAGTTCAGAATATGGTTCTACTTTTGCTTTAGCTCGGGTTTTTGCTTTTCTGTCTGGT
GCTCCTGATTATGGAGCTGGTCTGCTAGATACCAGGAGATATGGGGAGCAATATGCTAGT
AAAGGGGTAGATGCTGACCTTGCATTACTCCCTGAACAGATACCTTTCTACAGAGACCTA
GCAGCTGTTGCTGTTCAATCAGGAGTATGCGTAGACATATTTGCTGTAACTGATGAATAC
ACTGATTTGGCTTCACTGAAGTTTTTAAGTATTGAAAGTGGTGGATCTTTATTTCTTTAT
GCAAATACAGACGATTCAACGCTTCCCCAAGACATATACCGCTTGCTAAGTCGACCCTAT
GCATTTGGTTGTGTTCTAAGGCTCAGAACATCTTCAGATTTTGAACCAGGCAATTCTTAT
GGGCATTTCTTCCCTGACCCTCAATATGAAAATGTGCAACACATCATCTGCTGTGATTCA
TTTGCCACTTATGCTTATGACTTTGAGTTTGCCCATAACAACGGTTTCTCCAGGCACACA
GATCCTGCTGTTGTCCAGATCGCTTTTCAGTACAGCGTGATTGAACCTGTCAAGGAGACA
TTAGGCAATGGTTCACAATCATCTGCAAGTTACAAGTTCTGTCTAAAGAGGCGGTTGAGA
ATAAGAACATTGCAGTATCGTCCAGCTAGTAATATCAGTGAAATTTATGACAGTGTAGAT
CCAGAGGTTGTACTGCATATCCTTGTTCATAAGGTTATTTTAGAATCTTTGGATAAAGGT
GTTAGAGAAGGCAGGCATCAAGTGCATGCTTGGCTATCCCTCCTTGCAGCCCGGTATAAT
CAGGCTCTGAGCTCTGATGTGCGAACTCCGCTATCGAGCATTGACATTGACTTCTCACAG
TGCCCACAGCTTCAAACGATACCTCAACTTGTTTTTGCATTGTTGAGAAGCCCTCTTCTT
CGCTTGCATGAAGAAGGCGTACACCCAGATTACAGGATATATCTACAATGCCTTTTCAGT
GCACTGGAGCCATCTTCTCTAGCTAAAGCCGTATATCCAGTTTTAGTATCGTATTCCTCA
CCTGACAAGCAAGCATTCCCACGACACACTCTGAGCCGTGCTGCTCTAATAATGAGCGAA
AGTCCAATATTTCTTCTCGACACATTTACCAACCTTATTGTTTACTATTTGTCAACTGCT
GATCCTTCAATTCCTTTTCCTCCACCCCGTGACTGTCTTTTGAGAACAACAATCAATAGA
CTGAAGCAGGACAGATGTATAACCCCAAAGCTTACATTCATCCATGGAGGGAAAGATGAT
TCAACATTGTTTGAGAGCTATCTCATTGAAGAGCAAGATGTTGATGGATCAGGCTTTACT
ACTGGTTCAGGTTTTGTAGCCTTCCGTGAGAGCGTGAGGAATGTTGCAGGGGAGATCATC
CAGGAAGAAATTGGAAGTTAG

Peptide Sequence

PEP ID

OQU78096
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:51122978:51128518:-1 gene:SORBI_3009G154500 transcript:OQU78096 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTFSHKIGLYDVQGPIPLVKNVFIPPDLEEDGLPVALEDAMPLHSFLAPVDTCKDRIAAA
LETLRPTSSWERGAASGQEEDTVLLGGRGFGTAMSALIEYLSSEYGSTFALARVFAFLSG
APDYGAGLLDTRRYGEQYASKGVDADLALLPEQIPFYRDLAAVAVQSGVCVDIFAVTDEY
TDLASLKFLSIESGGSLFLYANTDDSTLPQDIYRLLSRPYAFGCVLRLRTSSDFEPGNSY
GHFFPDPQYENVQHIICCDSFATYAYDFEFAHNNGFSRHTDPAVVQIAFQYSVIEPVKET
LGNGSQSSASYKFCLKRRLRIRTLQYRPASNISEIYDSVDPEVVLHILVHKVILESLDKG
VREGRHQVHAWLSLLAARYNQALSSDVRTPLSSIDIDFSQCPQLQTIPQLVFALLRSPLL
RLHEEGVHPDYRIYLQCLFSALEPSSLAKAVYPVLVSYSSPDKQAFPRHTLSRAALIMSE
SPIFLLDTFTNLIVYYLSTADPSIPFPPPRDCLLRTTINRLKQDRCITPKLTFIHGGKDD
STLFESYLIEEQDVDGSGFTTGSGFVAFRESVRNVAGEIIQEEIGS

Transcript Sequence

Transcript ID

OQU78096
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:51122978:51128518:-1 gene:SORBI_3009G154500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGATCTGTGGGTTGAATACGTGCAGTGGATGAGGCAGAGGGTGGAGGAGATGGCGTGCAG
GCGCTGCCTGTTTATGTGGCCGCAGTGGATCTCGCATGTAAGTCCAGTACATTCCGATCA
TGGAATTCTATCCCAGTCCGTTTGATGTGGGAAGTTACCTTCGTATGTGAATTCTAGGTC
ATACCCAAAGAACCCAACTAGATTGAAAAAGATAGTATGTTTTTCGGGATAAAAAGAACA
CAAAGCAATGAATGGACCTTGCTAAATTCTCACATTCGTCTATTTCAAGCAAACAACAAA
ACATAAAGAGGAAAATTAATTGCCTAGGTTTGGCACATAATTCAATGCTAATCATGCACA
CAGCAAATTTTCCTTTTGGATTATTTGTTGATCTTGTGTGATGTGCTATAAAGTAATCTG
GGACTTGATTGTTGCCAACTCTGAATGCTTTCAGGTTCCGAAGACTTCCTGGAACTCATC
AAGAGTGCGCTTCTTGCGGCCTTAGAAGGTATGGAATTCTGATCATTCTGAACTTCCTGA
ATTTTTTGGTTCATCGAATAACTGTGTTATTTGTGAATTCAGTTTGACCCTTCTTCATTT
GGGTTTTCACCATGCAACAGCTCTTATTCCGGGCTCCCTATTTGGGCTTATGACATTCAG
CCACAAGATTGGGTTGTATGATGTCCAAGGTCCGATTCCACTCGTAAAAAATGTTTTTAT
TCCTCCGGACTTAGAAGAAGATGGCCTGCCTGTTGCCCTTGAAGATGCCATGCCCCTACA
TTCTTTTTTGGCTCCAGTTGACACATGCAAGGATCGAATTGCTGCTGCTCTGGAGACACT
GCGACCTACATCTTCATGGGAGAGAGGTGCTGCTTCTGGGCAGGAAGAGGATACTGTTTT
GCTCGGAGGACGAGGTTTTGGGACAGCCATGTCTGCTTTAATTGAGTACCTAAGTTCAGA
ATATGGTTCTACTTTTGCTTTAGCTCGGGTTTTTGCTTTTCTGTCTGGTGCTCCTGATTA
TGGAGCTGGTCTGCTAGATACCAGGAGATATGGGGAGCAATATGCTAGTAAAGGGGTAGA
TGCTGACCTTGCATTACTCCCTGAACAGATACCTTTCTACAGAGACCTAGCAGCTGTTGC
TGTTCAATCAGGAGTATGCGTAGACATATTTGCTGTAACTGATGAATACACTGATTTGGC
TTCACTGAAGTTTTTAAGTATTGAAAGTGGTGGATCTTTATTTCTTTATGCAAATACAGA
CGATTCAACGCTTCCCCAAGACATATACCGCTTGCTAAGTCGACCCTATGCATTTGGTTG
TGTTCTAAGGCTCAGAACATCTTCAGATTTTGAACCAGGCAATTCTTATGGGCATTTCTT
CCCTGACCCTCAATATGAAAATGTGCAACACATCATCTGCTGTGATTCATTTGCCACTTA
TGCTTATGACTTTGAGTTTGCCCATAACAACGGTTTCTCCAGGCACACAGATCCTGCTGT
TGTCCAGATCGCTTTTCAGTACAGCGTGATTGAACCTGTCAAGGAGACATTAGGCAATGG
TTCACAATCATCTGCAAGTTACAAGTTCTGTCTAAAGAGGCGGTTGAGAATAAGAACATT
GCAGTATCGTCCAGCTAGTAATATCAGTGAAATTTATGACAGTGTAGATCCAGAGGTTGT
ACTGCATATCCTTGTTCATAAGGTTATTTTAGAATCTTTGGATAAAGGTGTTAGAGAAGG
CAGGCATCAAGTGCATGCTTGGCTATCCCTCCTTGCAGCCCGGTATAATCAGGCTCTGAG
CTCTGATGTGCGAACTCCGCTATCGAGCATTGACATTGACTTCTCACAGTGCCCACAGCT
TCAAACGATACCTCAACTTGTTTTTGCATTGTTGAGAAGCCCTCTTCTTCGCTTGCATGA
AGAAGGCGTACACCCAGATTACAGGATATATCTACAATGCCTTTTCAGTGCACTGGAGCC
ATCTTCTCTAGCTAAAGCCGTATATCCAGTTTTAGTATCGTATTCCTCACCTGACAAGCA
AGCATTCCCACGACACACTCTGAGCCGTGCTGCTCTAATAATGAGCGAAAGTCCAATATT
TCTTCTCGACACATTTACCAACCTTATTGTTTACTATTTGTCAACTGCTGATCCTTCAAT
TCCTTTTCCTCCACCCCGTGACTGTCTTTTGAGAACAACAATCAATAGACTGAAGCAGGA
CAGATGTATAACCCCAAAGCTTACATTCATCCATGGAGGGAAAGATGATTCAACATTGTT
TGAGAGCTATCTCATTGAAGAGCAAGATGTTGATGGATCAGGCTTTACTACTGGTTCAGG
TTTTGTAGCCTTCCGTGAGAGCGTGAGGAATGTTGCAGGGGAGATCATCCAGGAAGAAAT
TGGAAGTTAGTTTCAGCTCGATCACACTTTTGGTTCAGCTGCAGAGTGTATTGACTAGGA
TGCTACCTTAGTTAATGCCATCGTAGTTAACTGAAACTTAGATAGCCAAAATGGAGAAAC
AATGTCAATGAATAATAAAAGGAGGCCACTTGATATATAGTTACTTCTGTCAATAACTGC
TTTAGAATTGATGTCAGAGAAGCCTTTCTGGTACAGGGGTACCAGGTCTGTCTCTCCATG
CTAAAAGAGACGAGTTTTACTACAACAATACACCGTGGGAACCTGGTTATCTGAATTTTG
GGAGAATTCAAATTTTGGCGGATACCAGTGCTGCTGTCTATTCTGAGTAAATTGCATCCA
CCATACAACTTTTATGGTTGTATCACTTTGATCCAGCAAGTTGCAAACCAGGTAAGCAAA
TGTGTGAACTTGTCAAATATGTGTATCTATGGTCATATGTACGCGTAGCCTTGTTGGCTT
GAGCTTATTAGCCGAATCTGTCA