Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78027
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:49971865:49976764:-1 gene:SORBI_3009G142400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAGAGAACCCACATCATGGCAGCAGTGACCGCCTTGCCCTTGTGGGCAAGCAAGTT
GATCGTCGCCTACTCCTCCCCGTCTCTCCTGCCGCCGACGACGGCAAGGACGACAACGGC
GCCGCTGCTGTCATCAACCTCTGGGGCCAGCTAAAGATCCCGGACCCGTTCGTCTGGTCC
CACGCCGAAACGATGGTCTCCTCGGAGAGGGAGCTGGACGCGCCGGTGGTCGACGTCGGC
GCCGCCATGCGCGGCGGCGACGACGACTGCGGCGCCGGGATCCGCCGCGCCGCCGAGCTG
GTCTCCGGGGCGTGCTCGAGCCACGGGCTCTTCCAGGTGACCGGGCACGGCCTGGACCCC
GCGCTTGCCCGTGCCGCGCTCGACGGCGCCGCCGCCTTCTTCCGCCTGCCGCTCGCCACC
AAGCAGCGCGCCAGCCGCGCTCCGGGGAACGTGACCGGCTACACCGCCGCGCACGCAGAC
CGGTTCACGGCCAATCTTCCCTGGAAGGAGACGCTCTCCTTCGGCCACCGTGACCGCCGG
ACATCCGGCAGCCATGTTGTCGTGGACTACTTCACCTCCACGCTAGGAAGCGACTTCAAA
CCCTTAGGGGTGGTGTATCAGAACTACTGCAACGCGATGAAGGAGGTGTCGCTGGCGATA
ATGGAGGTGATAGGGGTGAGCCTGGGGGTGGGGAGGAGCTACTACAGGGACTTCTTCGCC
GACGGCAGCTCCATCATGAGGTGCAACTACTACCCACCGTGCCCGGAGCCGGAGAGGACG
CTGGGGACGGGGCCTCACTGCGACCCGTCGGCGCTCACCGTCCTGCTGCAGGACGGCGAC
GTAGACGGGCTCCAGGTGCTCGTCGACGGCGAGTGGCGGACCGTGCGGCCGAGGCCCGGC
GCGCTCGTCGTCAGCATCGGGGACACATTCATGTCTTTGCGTGTGGTGCATGCGTGCAGG
CGCTGTCGAACGGGCGGTACCGGAGCTGCCTCCACCGCGCGGTGGTGCACCGGGAGCGGG
AGCGCCGGTCGCTGGTCTTCTTCCTCTGCCCGCGCGAGGACCGCGTGGTGCGCCCGCCGC
CGCGCCTCCTCCTCGCCGTCGCCGCACGCGAGCAGCAGCAGGAGCAGCCGCGGCGGAGGT
ACCCGGACTTCACCTGGGCGGACCTGGCGCGCTTCACGCAGCGACACTACCGCGCCGACG
CCGGCACGCTCGACGCCTTCGCGCGCTGGCTCGGCGCCGCCCCCACCTGCGCCGCGGCGA
CGTCGGCGGCGTCCCAGAGCCCAGACAAGGCCCACGAGACAGTTTAGCTGCCTTGGCTTT
GCATTGGCTACTACCCAAGTGCTACTAGACGGAGACACGGAGTGGTGGCAGCATCTGTGT
ATAATAAGCACGTACTACATGCATTATATTATTAGCTGTATTGTTCATCTATTTGATGCA
TCGGCTGTACTTTTTGGTAAATGGCTTTTCAAGTTACTACCAAGTAATTTGGAATAA

Peptide Sequence

PEP ID

OQU78027
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:49971865:49976764:-1 gene:SORBI_3009G142400 transcript:OQU78027 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPENPHHGSSDRLALVGKQVDRRLLLPVSPAADDGKDDNGAAAVINLWGQLKIPDPFVWS
HAETMVSSERELDAPVVDVGAAMRGGDDDCGAGIRRAAELVSGACSSHGLFQVTGHGLDP
ALARAALDGAAAFFRLPLATKQRASRAPGNVTGYTAAHADRFTANLPWKETLSFGHRDRR
TSGSHVVVDYFTSTLGSDFKPLGVVYQNYCNAMKEVSLAIMEVIGVSLGVGRSYYRDFFA
DGSSIMRCNYYPPCPEPERTLGTGPHCDPSALTVLLQDGDVDGLQVLVDGEWRTVRPRPG
ALVVSIGDTFMSLRVVHACRRCRTGGTGAASTARWCTGSGSAGRWSSSSARARTAWCARR
RASSSPSPHASSSRSSRGGGTRTSPGRTWRASRSDTTAPTPARSTPSRAGSAPPPPAPRR
RRRRPRAQTRPTRQFSCLGFALATTQVLLDGDTEWWQHLCIISTYYMHYIISCIVHLFDA
SAVLFGKWLFKLLPSNLE

Transcript Sequence

Transcript ID

OQU78027
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:49971865:49976764:-1 gene:SORBI_3009G142400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAGAGAACCCACATCATGGCAGCAGTGACCGCCTTGCCCTTGTGGGCAAGCAAGTT
GATCGTCGCCTACTCCTCCCCGTCTCTCCTGCCGCCGACGACGGCAAGGACGACAACGGC
GCCGCTGCTGTCATCAACCTCTGGGGCCAGCTAAAGATCCCGGACCCGTTCGTCTGGTCC
CACGCCGAAACGATGGTCTCCTCGGAGAGGGAGCTGGACGCGCCGGTGGTCGACGTCGGC
GCCGCCATGCGCGGCGGCGACGACGACTGCGGCGCCGGGATCCGCCGCGCCGCCGAGCTG
GTCTCCGGGGCGTGCTCGAGCCACGGGCTCTTCCAGGTGACCGGGCACGGCCTGGACCCC
GCGCTTGCCCGTGCCGCGCTCGACGGCGCCGCCGCCTTCTTCCGCCTGCCGCTCGCCACC
AAGCAGCGCGCCAGCCGCGCTCCGGGGAACGTGACCGGCTACACCGCCGCGCACGCAGAC
CGGTTCACGGCCAATCTTCCCTGGAAGGAGACGCTCTCCTTCGGCCACCGTGACCGCCGG
ACATCCGGCAGCCATGTTGTCGTGGACTACTTCACCTCCACGCTAGGAAGCGACTTCAAA
CCCTTAGGGGTGGTGTATCAGAACTACTGCAACGCGATGAAGGAGGTGTCGCTGGCGATA
ATGGAGGTGATAGGGGTGAGCCTGGGGGTGGGGAGGAGCTACTACAGGGACTTCTTCGCC
GACGGCAGCTCCATCATGAGGTGCAACTACTACCCACCGTGCCCGGAGCCGGAGAGGACG
CTGGGGACGGGGCCTCACTGCGACCCGTCGGCGCTCACCGTCCTGCTGCAGGACGGCGAC
GTAGACGGGCTCCAGGTGCTCGTCGACGGCGAGTGGCGGACCGTGCGGCCGAGGCCCGGC
GCGCTCGTCGTCAGCATCGGGGACACATTCATGTCTTTGCGTGTGGTGCATGCGTGCAGG
CGCTGTCGAACGGGCGGTACCGGAGCTGCCTCCACCGCGCGGTGGTGCACCGGGAGCGGG
AGCGCCGGTCGCTGGTCTTCTTCCTCTGCCCGCGCGAGGACCGCGTGGTGCGCCCGCCGC
CGCGCCTCCTCCTCGCCGTCGCCGCACGCGAGCAGCAGCAGGAGCAGCCGCGGCGGAGGT
ACCCGGACTTCACCTGGGCGGACCTGGCGCGCTTCACGCAGCGACACTACCGCGCCGACG
CCGGCACGCTCGACGCCTTCGCGCGCTGGCTCGGCGCCGCCCCCACCTGCGCCGCGGCGA
CGTCGGCGGCGTCCCAGAGCCCAGACAAGGCCCACGAGACAGTTTAGCTGCCTTGGCTTT
GCATTGGCTACTACCCAAGTGCTACTAGACGGAGACACGGAGTGGTGGCAGCATCTGTGT
ATAATAAGCACGTACTACATGCATTATATTATTAGCTGTATTGTTCATCTATTTGATGCA
TCGGCTGTACTTTTTGGTAAATGGCTTTTCAAGTTACTACCAAGTAATTTGGAATAAGTA
TTTAAACTCTAAGACTCTATCTCAGGCTCTTTGGAATTGGAAAACTATAAGGACTCATAT
TCTAAAACAACAGTCCTAGAGTAACTCCAAGAGCTTGACTAAAATCTTCGAATTTTTTAA
ATAGGCTGCTCCGTTCTACCCGGAACATCCCATTCCGGACTAACCAAATGGGGCCTTAGA
CTATCTCCAACAAAGACAATCTAAACAC