Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78016
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:49632766:49637586:-1 gene:SORBI_3009G139200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCGCCGCCGCTCGCTCCCTCCCCCGCCTCTCCTCTTCCTGCTCCGCCCGCGCCCTT
CGCCGCGTCCTCCTGCACCCTCCACCACCCCAGCCCTCGCTTCCGCCTCCTCTCCCGCCT
CTCCGAACCCTTACACGCACCCTCCTCCCGCACCTCGCCGCCGCCCAACGGTTCTCCACT
ACCTCCTTCTCTACCTCCGCCCCATCACGCCTAGGAGAATGCGTTGGCGTGCGGGGAGCA
CCGGCGATACCCGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGGAGACGGGGGCGTTGGCG
CGGCATGACACGGATGCGTACGCGGCGGTAGAGCTGGCTCTGGACTCAGTGGTGAAGGTG
TTCACGGTGTCCAGCAGCCCCAACTACTTCTTGCCATGGCAAAACAAGGCGCAGCGGGAG
AGCATGGGCTCTGGGTTTGTGATTCCTGGAAGAAGGATTGTGACGAATGCACATGTGGTA
GCTGATCATACTTTTGTTCTTGTGAGGAAGCATGGTTCGCCTACTAAGTACAAGGCCGAA
GTCCAAGCTGTCGGTCATGAGTGCGACTTGGCTCTGTTGACAGTTGAGAGTGAGGAGTTT
TGGGATGGGGTGAACAGTTTGGAGCTTGGAGACATCCCCTTTTTGCAAGAAGCCGTCGCC
GTGGTTGGCTACCCTCAAGGTGGAGATAATATTTCTGTCACCAAGGGGGTTGTATCTAGA
GTTGAACCAACACAATATGCCCATGGTGCTACGCAGCTTATGGCTATACAAATAGACGCA
GCTATAAATCCAGGCAATAGTGGAGGGCCTGCCATTATGGGTGATAAAGTAGCCGGAGTT
GCTTTCCAGAATTTGTCAGGGGCAGAAAACATTGGTTATATCATACCGGTGCCCGTAATT
AAGCGTTTCATTTCTGGAGTAGAAGAGAGTGGTAAATATTCTGGGTTCTGTACTCTTGGA
GTATCTTGCCAGGCTACTGAAAATATTCAGTTAAGAGAATGCTTTGGGATGCGGCCTGAA
ATGACTGGAGTTTTAGTTAGTAGAATAAACCCTCTATCTGATGCTTACAAGATTTTGAAG
AAGGATGACATCCTTCTTGAGTTTGATGGTGTGCCTATCGCAAATGATGGCACAGTTCCA
TTCCGGAATAGAGAGAGAATCACCTTTGATCATCTGGTGTCCATGAAAAAACCTGAAGAA
ACAGCTGTTCTCAAAGTATTACGAGATGGTAAAGAGCAAGAATTGAAAGTAACACTTAGA
CCTCTGCAACCTTTAGTCCCAGTCCATCAATTTGATAAATTACCAAGCTACTACATATTT
GCTGGTTTTGTTTTCATCCCGCTTACCCAGCCTTATCTCCATGAATTTGGAGAAGACTGG
TATAATGCCTCGCCACGCCGATTATGTGAACGGGCACTAAGGGAGCTTCCAAAGAAGGCT
GGTGAACAATTAGTTATCCTATCTCAGGTTCTAATGGATGACATCAATGTCGGTTATGAA
AGGCTTGCTGAACTACAGGTAAAGAAGGTAAATGGTGTGGAGGTTGAAAACCTGAAGCAC
CTGTGCAGCCTCGTGGAAGGCTGCACCGAAGAAAACTTAAGGTTTGACCTGGACGATGAA
AGAGTCATTGTCCTGAAGTACCAGAACGCAAGGCTTGCCACATCCCGGGTCCTCAAACGG
CACAGGATACCGTCTGCCATATCGAGCGACCTTGTCCAAGATGAAGCAACTAATGGCGAG
GTTGAGACATCATGCACCAGCTGA

Peptide Sequence

PEP ID

OQU78016
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:49632766:49637586:-1 gene:SORBI_3009G139200 transcript:OQU78016 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLAAARSLPRLSSSCSARALRRVLLHPPPPQPSLPPPLPPLRTLTRTLLPHLAAAQRFST
TSFSTSAPSRLGECVGVRGAPAIPEEEEEEEEREETGALARHDTDAYAAVELALDSVVKV
FTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGSPTKYKAE
VQAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSR
VEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDKVAGVAFQNLSGAENIGYIIPVPVI
KRFISGVEESGKYSGFCTLGVSCQATENIQLRECFGMRPEMTGVLVSRINPLSDAYKILK
KDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPEETAVLKVLRDGKEQELKVTLR
PLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNASPRRLCERALRELPKKA
GEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVEGCTEENLRFDLDDE
RVIVLKYQNARLATSRVLKRHRIPSAISSDLVQDEATNGEVETSCTS

Transcript Sequence

Transcript ID

OQU78016
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:49632766:49637586:-1 gene:SORBI_3009G139200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGTCGGCTCGGCTCTCCCTCCGGCGAGGCCACCATGCTCGCCGCCGCTCGCTCCCTCCC
CCGCCTCTCCTCTTCCTGCTCCGCCCGCGCCCTTCGCCGCGTCCTCCTGCACCCTCCACC
ACCCCAGCCCTCGCTTCCGCCTCCTCTCCCGCCTCTCCGAACCCTTACACGCACCCTCCT
CCCGCACCTCGCCGCCGCCCAACGGTTCTCCACTACCTCCTTCTCTACCTCCGCCCCATC
ACGCCTAGGAGAATGCGTTGGCGTGCGGGGAGCACCGGCGATACCCGAGGAGGAGGAGGA
GGAGGAGGAGAGGGAGGAGACGGGGGCGTTGGCGCGGCATGACACGGATGCGTACGCGGC
GGTAGAGCTGGCTCTGGACTCAGTGGTGAAGGTGTTCACGGTGTCCAGCAGCCCCAACTA
CTTCTTGCCATGGCAAAACAAGGCGCAGCGGGAGAGCATGGGCTCTGGGTTTGTGATTCC
TGGAAGAAGGATTGTGACGAATGCACATGTGGTAGCTGATCATACTTTTGTTCTTGTGAG
GAAGCATGGTTCGCCTACTAAGTACAAGGCCGAAGTCCAAGCTGTCGGTCATGAGTGCGA
CTTGGCTCTGTTGACAGTTGAGAGTGAGGAGTTTTGGGATGGGGTGAACAGTTTGGAGCT
TGGAGACATCCCCTTTTTGCAAGAAGCCGTCGCCGTGGTTGGCTACCCTCAAGGTGGAGA
TAATATTTCTGTCACCAAGGGGGTTGTATCTAGAGTTGAACCAACACAATATGCCCATGG
TGCTACGCAGCTTATGGCTATACAAATAGACGCAGCTATAAATCCAGGCAATAGTGGAGG
GCCTGCCATTATGGGTGATAAAGTAGCCGGAGTTGCTTTCCAGAATTTGTCAGGGGCAGA
AAACATTGGTTATATCATACCGGTGCCCGTAATTAAGCGTTTCATTTCTGGAGTAGAAGA
GAGTGGTAAATATTCTGGGTTCTGTACTCTTGGAGTATCTTGCCAGGCTACTGAAAATAT
TCAGTTAAGAGAATGCTTTGGGATGCGGCCTGAAATGACTGGAGTTTTAGTTAGTAGAAT
AAACCCTCTATCTGATGCTTACAAGATTTTGAAGAAGGATGACATCCTTCTTGAGTTTGA
TGGTGTGCCTATCGCAAATGATGGCACAGTTCCATTCCGGAATAGAGAGAGAATCACCTT
TGATCATCTGGTGTCCATGAAAAAACCTGAAGAAACAGCTGTTCTCAAAGTATTACGAGA
TGGTAAAGAGCAAGAATTGAAAGTAACACTTAGACCTCTGCAACCTTTAGTCCCAGTCCA
TCAATTTGATAAATTACCAAGCTACTACATATTTGCTGGTTTTGTTTTCATCCCGCTTAC
CCAGCCTTATCTCCATGAATTTGGAGAAGACTGGTATAATGCCTCGCCACGCCGATTATG
TGAACGGGCACTAAGGGAGCTTCCAAAGAAGGCTGGTGAACAATTAGTTATCCTATCTCA
GGTTCTAATGGATGACATCAATGTCGGTTATGAAAGGCTTGCTGAACTACAGGTAAAGAA
GGTAAATGGTGTGGAGGTTGAAAACCTGAAGCACCTGTGCAGCCTCGTGGAAGGCTGCAC
CGAAGAAAACTTAAGGTTTGACCTGGACGATGAAAGAGTCATTGTCCTGAAGTACCAGAA
CGCAAGGCTTGCCACATCCCGGGTCCTCAAACGGCACAGGATACCGTCTGCCATATCGAG
CGACCTTGTCCAAGATGAAGCAACTAATGGCGAGGTTGAGACATCATGCACCAGCTGATG
CGGGCCTCTTTTTAGACCTATACTAGTTGGGAGTTCCCTGCAGCACGGTTCAAGGAGCGA
GCTGCATTGTTGGCGAGGCAAGCCTATCTGCCTGGAGTGCATGGCTTCACTTGCCCCCTG
TTGGGACGCTTCAGTTTTGACGTAAGGAGTGTCTTCAGAAAATAAGGTTATGAGCTCCGG
AGCTTTTCGGTCTGAATGTAACAGTAACATAATCATTCTTTACTAAAACATTCATTTTTG
CCATCGTTGGCATGGCGCCCCCACATGGTCTGTACCATCAGGAAACATACACAGCATAG