Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78005
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:49119550:49125782:1 gene:SORBI_3009G135800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCGATCTCAAGGAGGTTTTCCGCTCCCTCCAAGAACTCTTCCCTCAGGTTGATCAT
CGTATACTGAAGGCTATCGCAATTGAGCACCGTAAAGATGTTGATTCCGCGGTGGTTGCT
GTCCTTGATGAAGTCATGCCATCCATGACTGGTTCGGCTGGAGCTTTGTCTACCCATCGA
GAAGGGTTGCCATCTATGGATGATTCTGTTGGGAATTTGTTTGCTAATCGCAGCACATGT
GAAGTGGGAAGTTCATCGTCTGCTGGACATGATATACATATCGATGAGATTGATGTAAGT
GTTCACTCTGCGCAACACACTTCTTCTGGGGAGGTCAAAACTTGCAAGCAAGAAAACATA
AACATTGAATATGTGGGAAGAGTTGCATCAATCGAAGGGGTCAGTGAGCAACTAAATCTA
CATTCTGATCCTATCCCAAATGACGGTCAGCATGATTTGATTCCCAACCTTGATGTGCTA
TCTTCAAATACCAATCCAGAGAAACAGTTGGCTAACACAGATAATGAAGTTGGATACGGT
GGATTGTCAAGTGAATGTTTTTCTCAACCACCGACAGGGGAAGACGGTGGTGATATCCCA
CAATCCCATGATCAAGATCCTAATAAGATTATTCCAGTTGGGGATTACTTCCCCCAGAAC
ACTTCAATGAAGTTCTTCAGTGGTTATGAGGACATAAATTTTGATGATGACCTTTTGCCT
CTTGGTTCTAATGATCAAATATCTTCTGGAATTTTGGGTACTGAAAAAGATTCTTTTGCA
CCTGTGCTGGATGTTCCTGGCCGAGATAAAGAAGAATCCTCAGTTGGGACTTCTGGATTT
ATAGAACAGAAGGACACCAGCAGTGTTGCAGATATGCTTCCTGATCTTAATTTGAATCAT
TTTGCTTCTACGGCTTCAGCTCACTCAAGCCATTCTGTTAGTATTGAGTCTCTTGAGGAT
TCTGTTGCTGATGCCAGAAGCAATAAGAATGATCTGTTACCTTCTCTAGAGTTGGTTACA
AAAATGATAGAGGATGTTGAGCTTCTTGAAGAAAAGGCTAAAGTAGCCAAGCATGAAGCA
TCTGTTGCTGGGACAGGCATTCTGACCAAAGTTGAGGAGCTCAGAGAAATGTTAACTCAT
GCAAAGGAAGCAAATGATATGCATGCTGGCGAGGTTTTCGGTGAGAAAGCTATTTTAACC
ACAGAGGCACGTGAGCTTCAATCACGACTTCAGAGGCTTTCAGATGAGAGGAATAAATAT
CTGGTGATAATTGAAGAGATACGCCAAACTCTTGATGAAAGATTGGCTGCTGCACAACAA
GAAATTGCAGCAGCTGAGAAAGAAAAGATTGAAAAGGAGGCTGCTGCTCAGGCACTACTT
GATGAACAGGAAAAGACGATGAATTCTATTGTTGAAGAATCAAGAAAGCTGCAGATAGCA
GCTGAGGAGAACCTGAAGTTGAAGGAATTCTTGGTTGAGCGGGGGCAAATTGTTGATATG
CTGCAAGGTGAGATGGCCGTGATCTGTGAGGACGTTTCGTTGCTCAAGCGAGTGGTGGAT
GAGCGCCTATCATTGAGCAAGTTGCAGCGCTCAGCTATGTCGAGCCTCTCTTCTTCACTG
CATTCTTCTCAACACAAGAGCTGGACTTCCTCGGATAGGACTACTGAAGCAATGGAGTCT
CCAGATAAGCGCACCCTTGTTGAACCTGCAAGCCCAGTGTGCAAAGATCTGGATGGCGAT
GACGACGAGTGCACTGTGGAAGTGTCATATGGCAACGACACTGGTAAAGGTATCTTGAAG
CGCGTGAATTCCAAGGAGGACGGTGATGGATGGGAGCTTTGCTGA

Peptide Sequence

PEP ID

OQU78005
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:49119550:49125782:1 gene:SORBI_3009G135800 transcript:OQU78005 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGDLKEVFRSLQELFPQVDHRILKAIAIEHRKDVDSAVVAVLDEVMPSMTGSAGALSTHR
EGLPSMDDSVGNLFANRSTCEVGSSSSAGHDIHIDEIDVSVHSAQHTSSGEVKTCKQENI
NIEYVGRVASIEGVSEQLNLHSDPIPNDGQHDLIPNLDVLSSNTNPEKQLANTDNEVGYG
GLSSECFSQPPTGEDGGDIPQSHDQDPNKIIPVGDYFPQNTSMKFFSGYEDINFDDDLLP
LGSNDQISSGILGTEKDSFAPVLDVPGRDKEESSVGTSGFIEQKDTSSVADMLPDLNLNH
FASTASAHSSHSVSIESLEDSVADARSNKNDLLPSLELVTKMIEDVELLEEKAKVAKHEA
SVAGTGILTKVEELREMLTHAKEANDMHAGEVFGEKAILTTEARELQSRLQRLSDERNKY
LVIIEEIRQTLDERLAAAQQEIAAAEKEKIEKEAAAQALLDEQEKTMNSIVEESRKLQIA
AEENLKLKEFLVERGQIVDMLQGEMAVICEDVSLLKRVVDERLSLSKLQRSAMSSLSSSL
HSSQHKSWTSSDRTTEAMESPDKRTLVEPASPVCKDLDGDDDECTVEVSYGNDTGKGILK
RVNSKEDGDGWELC

Transcript Sequence

Transcript ID

OQU78005
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:49119550:49125782:1 gene:SORBI_3009G135800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGAGGCTGGAGCTGGTAAAAGCCCGTCCTCCCCCGTGGTTTCGGTCACCTCCTCGCTTTC
CTTCTTCACTTGGTATCTAACGCAATCAGCGGGGAACCCCAAACCCTAATCCTCTCCATC
CGCGACGCCGGAGACAGCCGTGTCGGAGCTCGGTTCTCGGGGTTCTGCATCGATTCTGTT
ATCTAGGTTTCTCAGATGGGCGATCTCAAGGAGGTTTTCCGCTCCCTCCAAGAACTCTTC
CCTCAGGTTGATCATCGTATACTGAAGGCTATCGCAATTGAGCACCGTAAAGATGTTGAT
TCCGCGGTGGTTGCTGTCCTTGATGAAGTCATGCCATCCATGACTGGTTCGGCTGGAGCT
TTGTCTACCCATCGAGAAGGGTTGCCATCTATGGATGATTCTGTTGGGAATTTGTTTGCT
AATCGCAGCACATGTGAAGTGGGAAGTTCATCGTCTGCTGGACATGATATACATATCGAT
GAGATTGATGTAAGTGTTCACTCTGCGCAACACACTTCTTCTGGGGAGGTCAAAACTTGC
AAGCAAGAAAACATAAACATTGAATATGTGGGAAGAGTTGCATCAATCGAAGGGGTCAGT
GAGCAACTAAATCTACATTCTGATCCTATCCCAAATGACGGTCAGCATGATTTGATTCCC
AACCTTGATGTGCTATCTTCAAATACCAATCCAGAGAAACAGTTGGCTAACACAGATAAT
GAAGTTGGATACGGTGGATTGTCAAGTGAATGTTTTTCTCAACCACCGACAGGGGAAGAC
GGTGGTGATATCCCACAATCCCATGATCAAGATCCTAATAAGATTATTCCAGTTGGGGAT
TACTTCCCCCAGAACACTTCAATGAAGTTCTTCAGTGGTTATGAGGACATAAATTTTGAT
GATGACCTTTTGCCTCTTGGTTCTAATGATCAAATATCTTCTGGAATTTTGGGTACTGAA
AAAGATTCTTTTGCACCTGTGCTGGATGTTCCTGGCCGAGATAAAGAAGAATCCTCAGTT
GGGACTTCTGGATTTATAGAACAGAAGGACACCAGCAGTGTTGCAGATATGCTTCCTGAT
CTTAATTTGAATCATTTTGCTTCTACGGCTTCAGCTCACTCAAGCCATTCTGTTAGTATT
GAGTCTCTTGAGGATTCTGTTGCTGATGCCAGAAGCAATAAGAATGATCTGTTACCTTCT
CTAGAGTTGGTTACAAAAATGATAGAGGATGTTGAGCTTCTTGAAGAAAAGGCTAAAGTA
GCCAAGCATGAAGCATCTGTTGCTGGGACAGGCATTCTGACCAAAGTTGAGGAGCTCAGA
GAAATGTTAACTCATGCAAAGGAAGCAAATGATATGCATGCTGGCGAGGTTTTCGGTGAG
AAAGCTATTTTAACCACAGAGGCACGTGAGCTTCAATCACGACTTCAGAGGCTTTCAGAT
GAGAGGAATAAATATCTGGTGATAATTGAAGAGATACGCCAAACTCTTGATGAAAGATTG
GCTGCTGCACAACAAGAAATTGCAGCAGCTGAGAAAGAAAAGATTGAAAAGGAGGCTGCT
GCTCAGGCACTACTTGATGAACAGGAAAAGACGATGAATTCTATTGTTGAAGAATCAAGA
AAGCTGCAGATAGCAGCTGAGGAGAACCTGAAGTTGAAGGAATTCTTGGTTGAGCGGGGG
CAAATTGTTGATATGCTGCAAGGTGAGATGGCCGTGATCTGTGAGGACGTTTCGTTGCTC
AAGCGAGTGGTGGATGAGCGCCTATCATTGAGCAAGTTGCAGCGCTCAGCTATGTCGAGC
CTCTCTTCTTCACTGCATTCTTCTCAACACAAGAGCTGGACTTCCTCGGATAGGACTACT
GAAGCAATGGAGTCTCCAGATAAGCGCACCCTTGTTGAACCTGCAAGCCCAGTGTGCAAA
GATCTGGATGGCGATGACGACGAGTGCACTGTGGAAGTGTCATATGGCAACGACACTGGT
AAAGGTATCTTGAAGCGCGTGAATTCCAAGGAGGACGGTGATGGATGGGAGCTTTGCTGA
AGATGTTCAGGAATAGCGGCCTTGCCAGATGATGCTGAACTGCTGAAGCATAGAAAATAT
GAACTAGCAATAATGGTGTATAAACGTTTTACTAGTCCGGTGCTAATCTAGTCGTTTTCA
TATGAAATCGGCGAACTGTCGTGGAACTGAGTCACTGGCTCACCGCAGCAGTATGTGAGA
TGAGTCCAACTGCAGCTTGATGTGGTATATATAAAAGTGAACATTTCAGCTGCCTCTGCT
GCCGAAATTTTAAGTTGTTTCT