Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77949
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:48110618:48113020:-1 gene:SORBI_3009G127500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCTCCTCCTCCCTCCCGGCGCCGCCGGCCCCGCCCTCTTCCTCCTGGCGCGGGCTC
ACGCCCCGCCGCCCTACGCCTCGCCGCGGCCCCCTCCTCCTCGCCCGCGCGGCGGCGCGC
TCTTGCCGCTACCGCTTCCGGACCGACGACGACGGCGTGGTGGACGTGGCCGTCGCCGGG
AAAGACGGCGATGCGGGGTACGCGGTCGCTGTAGAGGCCCCGGCCCATGGACGGCGGAGC
GGCGGTCTGGTGCTCCGTCCCGCCGGCTCCGGCGAGGGCGTCTCTCTGGCCCCTGCCGCG
CCGGGAGGCGCGCTCGCGGCTGAGCTGTCCTACGACGGGGCCCGCGCGCCGTTCCACGTC
TCGTTCACGCTGGCCGACGCGACGGGAGCGGAGATACGGACGCACCGCGGGACGAGCTTC
CGCGTGCCTGTGGGCGTCGGACGGGGCTGCCCCTCGCCGCTCGGCCTGTCCCGGTCCAAG
GACGGGGCCGCTAACTTCGCGGTTTACAGCAAGAGCGCCAAGGGCATGGTGCTCTGCCTG
TTCGGCGGCGGGGACGAGCCCGCGCTGGAGATCGAGCTCGACCCGTATGTCCACCGGACA
GGCGATGTCTGGCACGTCTCGATGGAGAGCGTGGAGGGATACGCCAGCTACGGCTTCCGC
AGCGGGCTGTTCGCCATGTTTGGCATTGACCGTCCGCTGCTCGACCCGTACGCCAAGGTG
ATCGGGGACTTCGTCCCTGCCGACTCTGTTAATGAGGATGGGCTAGCGGTGCCGGCCGTC
AGGTGCCTCGCGTCCTTGAAGAATGCACCCAGCTACGATTGGGGCAGGGACAAGCATCCG
TGCTTGCCATTGGAGAAGCTGGTGGTCTACCGGGCAAATGTAGCTTTGTTCACCAAGGAC
AAGTCGAGTGGACTAGCAGACGATGTCGCCGGTACTTTCTCTGGCATGGCTGCGAAGGTG
AAACACTTCAGGCATCTTGGTGTCAATGCAGTTTTGCTGGAGCCAGTGTTTCCATACCAC
CAAGTGAAGGGACCATATTTCCCGTACCATTTCTTTTCACCTATGAGCTTGTATAGCAGT
GAATGCTCCAGTGTTTCAGCTATCAAGTCTATGAAGGATATGGTCAAAACAATGCACAGA
AATGGAATAGAGGTTCTCTTGGAGGTTGTTTTCACGCATACTGCTGAAGGAGGAGCAGAG
TGTCAGATGATATCGCTCCGAGGCATTGATGGTTCCTCGTACTACATTGCTGACGGAATT
GCTGGATGCAAGGCAAGTGTGTTGAATTGCAACCATCCGGTGACTCAGAAGCTGATTTTG
GACAGCCTCCGCCATTGGGTGCTCGACTTCCATGTTGATGGGTTCTGCTTCATCAATGCC
CCTTTCCTTGTCAGAGGTCCAGGTGGTGAGGGCCTTTCACGGCCTCCACTTCTTGAAGCC
ATAGCATTTGACCCTGTTCTTTCAAAGACTAAGATCATTGCAGATCCTTGGTCTCCACTT
GACATATCTAATGTGCAATTTCCATTCCCTCATTGGAAAAGATGGGCTGAGATGAACACA
AGATTCTCTATGGATGTGCGCAAGTTTCTTAAGGGAGAAGCACTTATCAGTGATCTTGCT
ACACGTTTGTGTGGCAGCGGGGATTTATTTTCCTCAAGGGGCCCAGCGTTTTCGTTCAAT
TATGTATCCAGGAATTCTGGACTCACTCTTGTTGATCTGGTGAGCTTCAGCAGTGATGAG
CTTGGTTCTGAGTTCAGTTGGAATTGTGGTGAAGAAGGACCATCAGAGAACAATGCAGTC
CTCCAAACGAGGCTAAGGCAGATACGCAATTTATTATTTATTCTATTTATTTCCCTTGGT
ATCCCTGTTCTTAACATGGGAGATGAATGTGGACACTCTGCTGTTGGTTCAACATCATAC
AAGGATAGAGGGCCTCTGAACTGGAAAGCCCTGAAGACCACTTTTGTTAAGGAAGTCACA
GGGTTTATTTCATTTCTATCTGCACTAAGGAGTCGACGAGCGGACATTTTCCAGAGAAGA
GAATTTCTAAAATTTGAAAATATACATTGGTATGGGAGTGATTTATCTGAACCACGTTGG
GAGGATCCTACTAGCAACTTTCTTTGTATGCACATAAATGCGGAGCTGGACGAGAAGCTA
CCAGATTCAACTGGAGGTGATTTGTATATCTGTTTCAATGCAAACGAGGAGTCAGCAAGT
GCTACTTTACCAGCTATTGCAGAAGGATCCATGTGGTTGCGCTTGGTTGATACATCACTT
GCATTTCCAGGTTTCTTTTCAAGAGGGTCTAATCCTGAAATACACAAAGTGCTAGGATTT
TCCTCATATCAAGTAAACGCACATAGTTGTGTTTTGTTTGAATCGAAGAGGGTTCTTTCC
TAG

Peptide Sequence

PEP ID

OQU77949
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:48110618:48113020:-1 gene:SORBI_3009G127500 transcript:OQU77949 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASSSLPAPPAPPSSSWRGLTPRRPTPRRGPLLLARAAARSCRYRFRTDDDGVVDVAVAG
KDGDAGYAVAVEAPAHGRRSGGLVLRPAGSGEGVSLAPAAPGGALAAELSYDGARAPFHV
SFTLADATGAEIRTHRGTSFRVPVGVGRGCPSPLGLSRSKDGAANFAVYSKSAKGMVLCL
FGGGDEPALEIELDPYVHRTGDVWHVSMESVEGYASYGFRSGLFAMFGIDRPLLDPYAKV
IGDFVPADSVNEDGLAVPAVRCLASLKNAPSYDWGRDKHPCLPLEKLVVYRANVALFTKD
KSSGLADDVAGTFSGMAAKVKHFRHLGVNAVLLEPVFPYHQVKGPYFPYHFFSPMSLYSS
ECSSVSAIKSMKDMVKTMHRNGIEVLLEVVFTHTAEGGAECQMISLRGIDGSSYYIADGI
AGCKASVLNCNHPVTQKLILDSLRHWVLDFHVDGFCFINAPFLVRGPGGEGLSRPPLLEA
IAFDPVLSKTKIIADPWSPLDISNVQFPFPHWKRWAEMNTRFSMDVRKFLKGEALISDLA
TRLCGSGDLFSSRGPAFSFNYVSRNSGLTLVDLVSFSSDELGSEFSWNCGEEGPSENNAV
LQTRLRQIRNLLFILFISLGIPVLNMGDECGHSAVGSTSYKDRGPLNWKALKTTFVKEVT
GFISFLSALRSRRADIFQRREFLKFENIHWYGSDLSEPRWEDPTSNFLCMHINAELDEKL
PDSTGGDLYICFNANEESASATLPAIAEGSMWLRLVDTSLAFPGFFSRGSNPEIHKVLGF
SSYQVNAHSCVLFESKRVLS

Transcript Sequence

Transcript ID

OQU77949
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:48110618:48113020:-1 gene:SORBI_3009G127500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCTCCTCCTCCCTCCCGGCGCCGCCGGCCCCGCCCTCTTCCTCCTGGCGCGGGCTC
ACGCCCCGCCGCCCTACGCCTCGCCGCGGCCCCCTCCTCCTCGCCCGCGCGGCGGCGCGC
TCTTGCCGCTACCGCTTCCGGACCGACGACGACGGCGTGGTGGACGTGGCCGTCGCCGGG
AAAGACGGCGATGCGGGGTACGCGGTCGCTGTAGAGGCCCCGGCCCATGGACGGCGGAGC
GGCGGTCTGGTGCTCCGTCCCGCCGGCTCCGGCGAGGGCGTCTCTCTGGCCCCTGCCGCG
CCGGGAGGCGCGCTCGCGGCTGAGCTGTCCTACGACGGGGCCCGCGCGCCGTTCCACGTC
TCGTTCACGCTGGCCGACGCGACGGGAGCGGAGATACGGACGCACCGCGGGACGAGCTTC
CGCGTGCCTGTGGGCGTCGGACGGGGCTGCCCCTCGCCGCTCGGCCTGTCCCGGTCCAAG
GACGGGGCCGCTAACTTCGCGGTTTACAGCAAGAGCGCCAAGGGCATGGTGCTCTGCCTG
TTCGGCGGCGGGGACGAGCCCGCGCTGGAGATCGAGCTCGACCCGTATGTCCACCGGACA
GGCGATGTCTGGCACGTCTCGATGGAGAGCGTGGAGGGATACGCCAGCTACGGCTTCCGC
AGCGGGCTGTTCGCCATGTTTGGCATTGACCGTCCGCTGCTCGACCCGTACGCCAAGGTG
ATCGGGGACTTCGTCCCTGCCGACTCTGTTAATGAGGATGGGCTAGCGGTGCCGGCCGTC
AGGTGCCTCGCGTCCTTGAAGAATGCACCCAGCTACGATTGGGGCAGGGACAAGCATCCG
TGCTTGCCATTGGAGAAGCTGGTGGTCTACCGGGCAAATGTAGCTTTGTTCACCAAGGAC
AAGTCGAGTGGACTAGCAGACGATGTCGCCGGTACTTTCTCTGGCATGGCTGCGAAGGTG
AAACACTTCAGGCATCTTGGTGTCAATGCAGTTTTGCTGGAGCCAGTGTTTCCATACCAC
CAAGTGAAGGGACCATATTTCCCGTACCATTTCTTTTCACCTATGAGCTTGTATAGCAGT
GAATGCTCCAGTGTTTCAGCTATCAAGTCTATGAAGGATATGGTCAAAACAATGCACAGA
AATGGAATAGAGGTTCTCTTGGAGGTTGTTTTCACGCATACTGCTGAAGGAGGAGCAGAG
TGTCAGATGATATCGCTCCGAGGCATTGATGGTTCCTCGTACTACATTGCTGACGGAATT
GCTGGATGCAAGGCAAGTGTGTTGAATTGCAACCATCCGGTGACTCAGAAGCTGATTTTG
GACAGCCTCCGCCATTGGGTGCTCGACTTCCATGTTGATGGGTTCTGCTTCATCAATGCC
CCTTTCCTTGTCAGAGGTCCAGGTGGTGAGGGCCTTTCACGGCCTCCACTTCTTGAAGCC
ATAGCATTTGACCCTGTTCTTTCAAAGACTAAGATCATTGCAGATCCTTGGTCTCCACTT
GACATATCTAATGTGCAATTTCCATTCCCTCATTGGAAAAGATGGGCTGAGATGAACACA
AGATTCTCTATGGATGTGCGCAAGTTTCTTAAGGGAGAAGCACTTATCAGTGATCTTGCT
ACACGTTTGTGTGGCAGCGGGGATTTATTTTCCTCAAGGGGCCCAGCGTTTTCGTTCAAT
TATGTATCCAGGAATTCTGGACTCACTCTTGTTGATCTGGTGAGCTTCAGCAGTGATGAG
CTTGGTTCTGAGTTCAGTTGGAATTGTGGTGAAGAAGGACCATCAGAGAACAATGCAGTC
CTCCAAACGAGGCTAAGGCAGATACGCAATTTATTATTTATTCTATTTATTTCCCTTGGT
ATCCCTGTTCTTAACATGGGAGATGAATGTGGACACTCTGCTGTTGGTTCAACATCATAC
AAGGATAGAGGGCCTCTGAACTGGAAAGCCCTGAAGACCACTTTTGTTAAGGAAGTCACA
GGGTTTATTTCATTTCTATCTGCACTAAGGAGTCGACGAGCGGACATTTTCCAGAGAAGA
GAATTTCTAAAATTTGAAAATATACATTGGTATGGGAGTGATTTATCTGAACCACGTTGG
GAGGATCCTACTAGCAACTTTCTTTGTATGCACATAAATGCGGAGCTGGACGAGAAGCTA
CCAGATTCAACTGGAGGTGATTTGTATATCTGTTTCAATGCAAACGAGGAGTCAGCAAGT
GCTACTTTACCAGCTATTGCAGAAGGATCCATGTGGTTGCGCTTGGTTGATACATCACTT
GCATTTCCAGGTTTCTTTTCAAGAGGGTCTAATCCTGAAATACACAAAGTGCTAGGATTT
TCCTCATATCAAGTAAACGCACATAGTTGTGTTTTGTTTGAATCGAAGAGGGTTCTTTCC
TAG