Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77935
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:47885162:47890849:1 gene:SORBI_3009G125600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCCTCGCCGAGGCGCCGTCGTCGTCCCCGTCGTCGTCGAGCGGGAGCGACGACTTC
GCGGCCCTCCTCGCCTCCGAGCTCGAGCTCGAGCTCGCCTCCGGCGCTGACTCCGCCTTC
CCTGGCGACGCCTCCTCCGCTTTCCCCGCCACCGACGGCGAGGGCGAGGATGAGGATGAG
GATCCGGAGGAGCTAGAGGTTGAAGCCGTAGAACAAAACGCTACCAAAAGGCGTAGAGTG
GAGGAACAACACCGAGATCAAGGAACATCAGTTAGGCCTGACAAAATTCCCACTGGTGCA
TCTAAAAATATTCAGGTCGAGGCATGTCCACATCCTGGATATATACGTGGACTTTGCTAT
ATATGTGGCAATCCACAAGATGAGGAATATATTTCAGGAGTTGCTTTAGATTACATCGAC
AAGGGCTTGAGGCTACGTACCTCAGAAATTGACAGACTTCGTTGTGCTGATTTGAAGAAT
CTGTTGCGTGAAAGAAAATTAGTACTCATTTTGGACTTGGATCACACACTGATCAACTCG
ACCAAACTCCAAAATATTTCTTCTGCTGAAAAAGATTTGGGTATTCAGACTGCTGCTTCA
AAAGATGATCCAAACAGAAGCATCTTTGCACTAGAATCAATGCAGTTGCTCACAAAGTTG
AGACCATTTGTCCGAGAATTTCTGAAAGAAGCAAGCAATATGTTTGAGATGTATATATAC
ACCATGGGTGACAAAGCTTATGCAATTGAAATTGCAAAGCTTCTTGACCCTAGCAACATC
TATTTTCCTTTAAAAGTGATTTCAAACTCAGATTGCACTAAGCGACACCAGAAAGGTCTT
GATGTGATTCTTGGAGCTGCAAGTGTTGCAGTGATTCTTGATGACACTGAGTTTGTATGG
AAGAAGCATAAAGAGAACCTGATTCTGATGGAGAGATATCATTTCTTTGCTTCAAGCTGC
CGCGAATTTGGTTTTGCTGTTAGGTCTTTGTCAGAGTTGATGCAAGATGAAAGGGAGAGT
GATGGTGCTTTGGCTACCGTTTTAGATGTCTTGAAGCGCATACACGCGATTTTCTTTGAT
ATGGCTGTTGAAACTGATGATCTTTCCTCACGGGATGTAAGACAGGTGATCAAGGCAGTA
CGGAAGGAAATACTGCAAGGTTGCAAAATAGTCTTCAGTCGGGTGTTCCCAAACAATACA
CGCCCACAGAAGCAGATGGTCTGGAAGATGGCTGAGTATCTGGGTGCCGTTTGCTCTACA
GATGTGGATTCCAGTGTCACCCATGTTGTAACTGTGGATCTAGGAACAGAGAAGGCCCGC
TGGGGTGTTGCCAACAAGAAGTTCTTGGTCCACCCACGCTGGATCGAAGCAGCAAATTTC
CGGTGGCATAGGCAACCGGAGGAAGATTTTCCTGTCACTGCCCCGAAGGAAAAGAGCAGA
GGGAAAAATAATGCTGTGGCTGGCAAGAAGGAGACGAGCAAGGATAAGGAGAATGCTGCA
GCTGGCCAGAAGGAAACGAGGAAGGACAAAGAAGAAAATGATGTGTCTAGTCAGAAGGAA
ACGAGGAACGTGGAAACAAAAGTAGCTGGTCATGCCAACGAAAACGTTGTGGCCACATCT
ACAACAGGTCCTGCTGACTCGTAA

Peptide Sequence

PEP ID

OQU77935
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:47885162:47890849:1 gene:SORBI_3009G125600 transcript:OQU77935 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLAEAPSSSPSSSSGSDDFAALLASELELELASGADSAFPGDASSAFPATDGEGEDEDE
DPEELEVEAVEQNATKRRRVEEQHRDQGTSVRPDKIPTGASKNIQVEACPHPGYIRGLCY
ICGNPQDEEYISGVALDYIDKGLRLRTSEIDRLRCADLKNLLRERKLVLILDLDHTLINS
TKLQNISSAEKDLGIQTAASKDDPNRSIFALESMQLLTKLRPFVREFLKEASNMFEMYIY
TMGDKAYAIEIAKLLDPSNIYFPLKVISNSDCTKRHQKGLDVILGAASVAVILDDTEFVW
KKHKENLILMERYHFFASSCREFGFAVRSLSELMQDERESDGALATVLDVLKRIHAIFFD
MAVETDDLSSRDVRQVIKAVRKEILQGCKIVFSRVFPNNTRPQKQMVWKMAEYLGAVCST
DVDSSVTHVVTVDLGTEKARWGVANKKFLVHPRWIEAANFRWHRQPEEDFPVTAPKEKSR
GKNNAVAGKKETSKDKENAAAGQKETRKDKEENDVSSQKETRNVETKVAGHANENVVATS
TTGPADS

Transcript Sequence

Transcript ID

OQU77935
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:47885162:47890849:1 gene:SORBI_3009G125600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCCTTCTTCACACTGCTCGCTGTCGTTGTGAAGCAACTGCCGCGAACATGAGCCTCGCC
GAGGCGCCGTCGTCGTCCCCGTCGTCGTCGAGCGGGAGCGACGACTTCGCGGCCCTCCTC
GCCTCCGAGCTCGAGCTCGAGCTCGCCTCCGGCGCTGACTCCGCCTTCCCTGGCGACGCC
TCCTCCGCTTTCCCCGCCACCGACGGCGAGGGCGAGGATGAGGATGAGGATCCGGAGGAG
CTAGAGGTTGAAGCCGTAGAACAAAACGCTACCAAAAGGCGTAGAGTGGAGGAACAACAC
CGAGATCAAGGAACATCAGTTAGGCCTGACAAAATTCCCACTGGTGCATCTAAAAATATT
CAGGTCGAGGCATGTCCACATCCTGGATATATACGTGGACTTTGCTATATATGTGGCAAT
CCACAAGATGAGGAATATATTTCAGGAGTTGCTTTAGATTACATCGACAAGGGCTTGAGG
CTACGTACCTCAGAAATTGACAGACTTCGTTGTGCTGATTTGAAGAATCTGTTGCGTGAA
AGAAAATTAGTACTCATTTTGGACTTGGATCACACACTGATCAACTCGACCAAACTCCAA
AATATTTCTTCTGCTGAAAAAGATTTGGGTATTCAGACTGCTGCTTCAAAAGATGATCCA
AACAGAAGCATCTTTGCACTAGAATCAATGCAGTTGCTCACAAAGTTGAGACCATTTGTC
CGAGAATTTCTGAAAGAAGCAAGCAATATGTTTGAGATGTATATATACACCATGGGTGAC
AAAGCTTATGCAATTGAAATTGCAAAGCTTCTTGACCCTAGCAACATCTATTTTCCTTTA
AAAGTGATTTCAAACTCAGATTGCACTAAGCGACACCAGAAAGGTCTTGATGTGATTCTT
GGAGCTGCAAGTGTTGCAGTGATTCTTGATGACACTGAGTTTGTATGGAAGAAGCATAAA
GAGAACCTGATTCTGATGGAGAGATATCATTTCTTTGCTTCAAGCTGCCGCGAATTTGGT
TTTGCTGTTAGGTCTTTGTCAGAGTTGATGCAAGATGAAAGGGAGAGTGATGGTGCTTTG
GCTACCGTTTTAGATGTCTTGAAGCGCATACACGCGATTTTCTTTGATATGGCTGTTGAA
ACTGATGATCTTTCCTCACGGGATGTAAGACAGGTGATCAAGGCAGTACGGAAGGAAATA
CTGCAAGGTTGCAAAATAGTCTTCAGTCGGGTGTTCCCAAACAATACACGCCCACAGAAG
CAGATGGTCTGGAAGATGGCTGAGTATCTGGGTGCCGTTTGCTCTACAGATGTGGATTCC
AGTGTCACCCATGTTGTAACTGTGGATCTAGGAACAGAGAAGGCCCGCTGGGGTGTTGCC
AACAAGAAGTTCTTGGTCCACCCACGCTGGATCGAAGCAGCAAATTTCCGGTGGCATAGG
CAACCGGAGGAAGATTTTCCTGTCACTGCCCCGAAGGAAAAGAGCAGAGGGAAAAATAAT
GCTGTGGCTGGCAAGAAGGAGACGAGCAAGGATAAGGAGAATGCTGCAGCTGGCCAGAAG
GAAACGAGGAAGGACAAAGAAGAAAATGATGTGTCTAGTCAGAAGGAAACGAGGAACGTG
GAAACAAAAGTAGCTGGTCATGCCAACGAAAACGTTGTGGCCACATCTACAACAGGTCCT
GCTGACTCGTAATCTATGTTGGGCTCCAAAGGTATCTGACACATTAACACATAGTGGTGC
AGTTTTGGAAGGGTGGTGGAAATTCAGATTTTGTTATCCCGTTCGTGCAGGCCCAGGACG
TTACATCTGTCCATTGCAAATTTTGCTGCTGACCTGAAGCTGACTGGTCCTCCGGCCATA
TAACTTACGCTACGATGAAACTATAGGAGTTTAAGCATATTGATGTGTTAATTATAGGTG
AATTTAGCTTGTAATACCTGCTCCTGTATATACTGCGCCCTGATTGAACTACAGTGAACA
TTCGTGATGATCGCTACGGATTCTTTAGTTAAGGCCTTGTTTAGTTTGCGAAAAAATTTT
ACTTTGGCTATTGTAGTATTTTAGTTTGTATTTGACAGTTACTCTCTCCATACCTGAATT
AGTTGACGTTTAAGACATGATTGTGCTTACCAA