Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77874
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:45870501:45872780:1 gene:SORBI_3009G116300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGTCGCTTCACGATTTCGCCCCTTGCATACGCCCTTGTATTGGTCGCCGCGGCGTGC
CCCGTGCTGGCCTATGTCCCTCACGGCGCCGCGGCACCGCGGCGGAGCACCGGCGCCGCC
CGCGAGCATCACGCCAACGCCCGAACTTACATCGTCCTGGTCGAGCCTCCGCCTGCGAGC
ACCCAGGAAGAAGACGAGGCCGCGCACCGCCGGTGGCACGAGTCGTTCCTCCAGAGCTCC
GGCGGCGGTGTCCGCCGCCGCGGCGTTCGCCACTCGTACACCAGCGTGCTCTCCGGCTTC
GCCGCTAGGCTGACCGACGACGAGCTCGCGGCCGTGTCCAGGAAGCCAGGGTTCGTGCGC
GCGTTCCCGGAACGCAGGGTGCCGCTCATGACGACGCGCACACCGGGGTTCCTCGGGCTC
ACTCCCGACGGCGGCGTCTGGGACGCCACCGGCTACGGCGAGGGCACCATCATTGGGTTT
CTGGACACCGGGATCGACGAGAAGCACCCTTCGTTCCGCGACGACGGCATGCCGCCGCCG
CCGCCCAGGTGGAAGGGCGCCTGCCAGCCTCCTGTTCGGTGCAACAACAAGCTCATCGGC
GCGGCGTCGTTCGTCGTGGACAACACCACCACCGACGACGTCGGCCACGGCACGCACACC
ACCGGCACTGCGGCCGGCCGGTTCGTGGAAGGAGTCTCGGCCTTCGGCCTTGGCGGCGGT
GGCACCGCTGCCGGGACGGCACCCGGCGCGCACCTGGCCGTGTACAAGGTCTGCGACGCC
CAAGGGTGCTTCGAGTCCGACTTGCTGGCCGGGATGGACGCCGCCGTGAAGGACGGCGTC
GACGTCCTCTCGGTGTCCCTCGGCGGCGTCTCCACGCCGTTGGACAAGGACCCCATCGCC
ATCGGCGCGTTCGCGGCGGTGTCCAAGGGCGTCCTCGTCGTGTGCGCCGGCGGCAACAGT
GGCCCTCTGCCCTCCACGCTGTCCAACGAAGCGCCGTGGATACTGACCGTGGCGGCCGGG
TCTGTGGACCGGAGCTTCCGTGCCAGCGTGCGGCTCGGCGACGGCGAGATGTTCCAAGGC
GAGTCACTGACTCAGGACAAGCACTTCAGCTCCAAGGTGTATCCGCTCTACTACTCAAAC
GGCATCAACTTCTGCGACTACTTCAACGTCAACATCACCGGCATGGTGGTCCTGTGCGAC
ACCGAGACACCGGTGCCACCGATGAGCTCCATCGAGGCGGTCCGCGAGGCTGGCGGCGCC
GGCGTCGTGTTCGTCAACGAACCAGACTTCGGATACACCATCGTCTTGGAGAAATACTAC
AACCTCCCCATGTCGCAGGTGACCGCGGTGGACGGCACCAAGATAATGGGCTACGCCATG
AAGGGTGCGTCCACGGCCAACCATACGGCAACGATCGTGTTCAACAGCACAGTCGTCGGC
GTGAAGCCGGCGCCGATCGTGGCAGCCTTCTCGTCGCGCGGCCCCAGCGTTGCCAGCCCA
GGCGTGCTGAAGCCCGACGTCATGGCGCCGGGGCTCAACGTCCTCGCGGCGTGGCCGTCG
GAGGTGCCCGTCGGGGGCCCCGAGTCGAACAGCTTCAACGTCATCTCCGGCACGTCCATG
GCGACGCCGCACATCACCGGCATCGTGGCGCTCGTCAAGAAGGCGCACCCGGACTGGTCG
CCCGCCGCGATCAAGTCCGCCATCATGACCACGTCCAGCGCCGTCGACAACGACGGCAAC
CAGATCATGGACGAGGAGCACCGGAAGGCGAGCTTCTACGCCCTCGGCGCCGGCCACGTT
GTCCCGACGAAGGCCGTAGACCCCGGCCTGGTGTACGACCTCGGCGTCCGCGACTACGCC
GGCTACATCTGCAGGCTCCTCGGCGAGGCGGCCCTGAAAACCATAGCCGGAAACACCAGC
TTGACCTGCACTGAGGTCGAGCCTATCACCGGGGCGCAGCTGAACTACCCGGCGATACTG
GTGCCGCTGCGAGCTGAGGCGTTCGCCGTGAACCGGACGGTGACGAACGTTGGGCCGGCG
AAGTCGAGCTACACCGCCAAGATCGAAGCGCCGAAAGGACTGACGGTCAAGGTGGAGCCG
GCGGAGCTGGAGTTCACCAAGGAAAATGAGAGGAAGACGTTCACGGTCACGGTGAGCGCA
GCCGCCGGAGCCAGCAGCGAGCAGAAGCTCGCCGAAGGGGCCCTGAGCTGGTTGTCCCAA
GACCATCATCACGTCGTGAGGAGCCCAATCGTGGCCGACTCCAGCCTTACCCTGAGTTGA

Peptide Sequence

PEP ID

OQU77874
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:45870501:45872780:1 gene:SORBI_3009G116300 transcript:OQU77874 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGRFTISPLAYALVLVAAACPVLAYVPHGAAAPRRSTGAAREHHANARTYIVLVEPPPAS
TQEEDEAAHRRWHESFLQSSGGGVRRRGVRHSYTSVLSGFAARLTDDELAAVSRKPGFVR
AFPERRVPLMTTRTPGFLGLTPDGGVWDATGYGEGTIIGFLDTGIDEKHPSFRDDGMPPP
PPRWKGACQPPVRCNNKLIGAASFVVDNTTTDDVGHGTHTTGTAAGRFVEGVSAFGLGGG
GTAAGTAPGAHLAVYKVCDAQGCFESDLLAGMDAAVKDGVDVLSVSLGGVSTPLDKDPIA
IGAFAAVSKGVLVVCAGGNSGPLPSTLSNEAPWILTVAAGSVDRSFRASVRLGDGEMFQG
ESLTQDKHFSSKVYPLYYSNGINFCDYFNVNITGMVVLCDTETPVPPMSSIEAVREAGGA
GVVFVNEPDFGYTIVLEKYYNLPMSQVTAVDGTKIMGYAMKGASTANHTATIVFNSTVVG
VKPAPIVAAFSSRGPSVASPGVLKPDVMAPGLNVLAAWPSEVPVGGPESNSFNVISGTSM
ATPHITGIVALVKKAHPDWSPAAIKSAIMTTSSAVDNDGNQIMDEEHRKASFYALGAGHV
VPTKAVDPGLVYDLGVRDYAGYICRLLGEAALKTIAGNTSLTCTEVEPITGAQLNYPAIL
VPLRAEAFAVNRTVTNVGPAKSSYTAKIEAPKGLTVKVEPAELEFTKENERKTFTVTVSA
AAGASSEQKLAEGALSWLSQDHHHVVRSPIVADSSLTLS

Transcript Sequence

Transcript ID

OQU77874
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:45870501:45872780:1 gene:SORBI_3009G116300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGTCGCTTCACGATTTCGCCCCTTGCATACGCCCTTGTATTGGTCGCCGCGGCGTGC
CCCGTGCTGGCCTATGTCCCTCACGGCGCCGCGGCACCGCGGCGGAGCACCGGCGCCGCC
CGCGAGCATCACGCCAACGCCCGAACTTACATCGTCCTGGTCGAGCCTCCGCCTGCGAGC
ACCCAGGAAGAAGACGAGGCCGCGCACCGCCGGTGGCACGAGTCGTTCCTCCAGAGCTCC
GGCGGCGGTGTCCGCCGCCGCGGCGTTCGCCACTCGTACACCAGCGTGCTCTCCGGCTTC
GCCGCTAGGCTGACCGACGACGAGCTCGCGGCCGTGTCCAGGAAGCCAGGGTTCGTGCGC
GCGTTCCCGGAACGCAGGGTGCCGCTCATGACGACGCGCACACCGGGGTTCCTCGGGCTC
ACTCCCGACGGCGGCGTCTGGGACGCCACCGGCTACGGCGAGGGCACCATCATTGGGTTT
CTGGACACCGGGATCGACGAGAAGCACCCTTCGTTCCGCGACGACGGCATGCCGCCGCCG
CCGCCCAGGTGGAAGGGCGCCTGCCAGCCTCCTGTTCGGTGCAACAACAAGCTCATCGGC
GCGGCGTCGTTCGTCGTGGACAACACCACCACCGACGACGTCGGCCACGGCACGCACACC
ACCGGCACTGCGGCCGGCCGGTTCGTGGAAGGAGTCTCGGCCTTCGGCCTTGGCGGCGGT
GGCACCGCTGCCGGGACGGCACCCGGCGCGCACCTGGCCGTGTACAAGGTCTGCGACGCC
CAAGGGTGCTTCGAGTCCGACTTGCTGGCCGGGATGGACGCCGCCGTGAAGGACGGCGTC
GACGTCCTCTCGGTGTCCCTCGGCGGCGTCTCCACGCCGTTGGACAAGGACCCCATCGCC
ATCGGCGCGTTCGCGGCGGTGTCCAAGGGCGTCCTCGTCGTGTGCGCCGGCGGCAACAGT
GGCCCTCTGCCCTCCACGCTGTCCAACGAAGCGCCGTGGATACTGACCGTGGCGGCCGGG
TCTGTGGACCGGAGCTTCCGTGCCAGCGTGCGGCTCGGCGACGGCGAGATGTTCCAAGGC
GAGTCACTGACTCAGGACAAGCACTTCAGCTCCAAGGTGTATCCGCTCTACTACTCAAAC
GGCATCAACTTCTGCGACTACTTCAACGTCAACATCACCGGCATGGTGGTCCTGTGCGAC
ACCGAGACACCGGTGCCACCGATGAGCTCCATCGAGGCGGTCCGCGAGGCTGGCGGCGCC
GGCGTCGTGTTCGTCAACGAACCAGACTTCGGATACACCATCGTCTTGGAGAAATACTAC
AACCTCCCCATGTCGCAGGTGACCGCGGTGGACGGCACCAAGATAATGGGCTACGCCATG
AAGGGTGCGTCCACGGCCAACCATACGGCAACGATCGTGTTCAACAGCACAGTCGTCGGC
GTGAAGCCGGCGCCGATCGTGGCAGCCTTCTCGTCGCGCGGCCCCAGCGTTGCCAGCCCA
GGCGTGCTGAAGCCCGACGTCATGGCGCCGGGGCTCAACGTCCTCGCGGCGTGGCCGTCG
GAGGTGCCCGTCGGGGGCCCCGAGTCGAACAGCTTCAACGTCATCTCCGGCACGTCCATG
GCGACGCCGCACATCACCGGCATCGTGGCGCTCGTCAAGAAGGCGCACCCGGACTGGTCG
CCCGCCGCGATCAAGTCCGCCATCATGACCACGTCCAGCGCCGTCGACAACGACGGCAAC
CAGATCATGGACGAGGAGCACCGGAAGGCGAGCTTCTACGCCCTCGGCGCCGGCCACGTT
GTCCCGACGAAGGCCGTAGACCCCGGCCTGGTGTACGACCTCGGCGTCCGCGACTACGCC
GGCTACATCTGCAGGCTCCTCGGCGAGGCGGCCCTGAAAACCATAGCCGGAAACACCAGC
TTGACCTGCACTGAGGTCGAGCCTATCACCGGGGCGCAGCTGAACTACCCGGCGATACTG
GTGCCGCTGCGAGCTGAGGCGTTCGCCGTGAACCGGACGGTGACGAACGTTGGGCCGGCG
AAGTCGAGCTACACCGCCAAGATCGAAGCGCCGAAAGGACTGACGGTCAAGGTGGAGCCG
GCGGAGCTGGAGTTCACCAAGGAAAATGAGAGGAAGACGTTCACGGTCACGGTGAGCGCA
GCCGCCGGAGCCAGCAGCGAGCAGAAGCTCGCCGAAGGGGCCCTGAGCTGGTTGTCCCAA
GACCATCATCACGTCGTGAGGAGCCCAATCGTGGCCGACTCCAGCCTTACCCTGAGTTGA