Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77847
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:44791313:44800404:1 gene:SORBI_3009G111400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAGGGGCACCACCACCATGGAGGTGCGCGCAGACGGCGTCGCCGTCATCACCATC
TCCAACCCGCCCGTCAACGCCCTCTCCCTCGACGTCATTGCTAGTTTGCAGAGGAACTAT
ACAGAGGCTCTAAGCAGGAATGATATCAAGGCAATCGTCCTCACTGGTGCCAAAGGAAGG
TTCTGCGGCGGATTCGATATATCTGCGTTTGGAAAGAAGCCAAAAAATGAGAAGCCTGGA
TCCATGTCTATTGATTTCTTGACTGACATAGTGGAAGATGCACATAAACCGTCAGTGGCT
GCTATAGATGGCATTGCTCTAGGAGGTGGGTTGGAGCTTGCTATGGTTTGCCATGCTCGC
ATTTCAACACCATCAGCTCAATTAGGACTACCTGAACTTCAACTTGGAATCATTCCTGGA
CTGGGAGGGACGCAGCGCCTTCCCCGTCTTGTTGGCCTGCCAAAAGCCATTGAGATGATG
TTGATGTCAAAGACTATAAAAGGCATGGGGGCACAAGAACTCGGCTTAGTTGATGCTGTT
ACTTCAGCTAATGAATTGGTCAACGCTGCCTGTTCCTGGGCTCTAGAAATTGTTGAAAAG
AAGAAACCATGGTTCAGAAGTCTCCACAGAACTGATAAACTTCCAGATCTTGCGGAAGTG
AAGGATGTTCTGAAATTTGCAAGAGTTCAAGCTAAAATGAAGGGTGCTAATGTTCAGCAT
CCCATAGTTTGCATTGATGTTATTGAAGAAGGAATAGTCTCTGGCCCTCGTGCAGGTCTC
ATGAAGGAAACTCTGTCTGGTAAAATGCTTGAGCAGTCTCAAACAAGCAAAAGCTTAAGA
CACTTTTTTTTCGCTCAGCGTGCTACTTCAAAGATTCCAAATATTACCAACATGGGTTTG
ACAGCACGGAAAATTAAAAAGGCAGCTATCATTGGGGGTGGTCTAATGGGATCAGGCATT
GCAACAATATTGATATTGAACAACTTCAGTGTTGTCTTGAAAGAAGTAAATGAAGAGTTC
TTATCTACTGGCATTAACAGAATTAAAGCCAATTTGCAGAGTTTCGTCAAAAAGGGTCAA
CTTGCCATAGAAGATTATAAAAAGAAACTTTCTCTGTTATGTGGTGTTCTTGACTATGAA
CAGTTCAGAGATACAGATGTAGTCATTGAGGCAGTTATTGAGGATATGTTTCTTAAGCAG
CAAATATTTTCTGATCTTGAGAAGTATTGCCATCATAATTGCATATTTGCCACAAACACT
TCAACTATAGACCTGAACATAATTGGTGAGAAGACAGCTTCTCAGGACCGGATTGTCGGC
GCACACTTCTTTAGCCCAGCTCATGTCATGCCACTGTTGGAAATAGTTTGTACTCATCAT
ACTTCTTCTCAAGTTATTGTGGACCTGCTTGATTTGGCAAAGAAGATACAGAAAACACCA
ATAGTTGTTGGCAACTGCACAGGTTTCGCTGTCAATCGGATGTTCTTTCCTTACGCTCAG
GCAGCTTGTTTTCTTGTTGATCATGGTCTGGATGTGTATCACACAGATCATGTGATCACA
CAATTTGGAATGCCAATGGGGCCCTTCCGATTAGCTGATCTTGTTGGTTTTGGTGTTGCT
ATTGCCACAAGGAAGCAATATTACCAGAGTTATCCTGGACGATGCTACAAATCAATGATT
CTTCAGATTCTTGTTGAGGATAATAGGACAGGTGAATCTTCTCGTAAGGGCTTCTATGTA
TATGACAATAAGCGCAAAGCCTCTCGAGATCCTGATTTGGGAAAGTACATTGAAAAATCA
AGGAACATGGCAGGTGTTATGCAAGATCCTAAGCTGATGAAACTAACAGACAATGACATT
GTGGAGATGATCTTCTTTCCTGTGGTGAATGAAGCCTGCCGAGTGCTTGATGAGGGAATT
GCTCTCAAAGCATCTGACCTTGATGTAGCTTCCATTATGGGGATGGGTTTCCCTTCTTAC
AGGGGTGGACTAATGTTTTGGGCCGACTCGCTTGGTGCGAAATATGTGTACGACAGACTG
GATGCATGGTCGAAGGATTACGGGGAGTTCTTCAGACCCTGTGAATATTTAGCTGTGAGA
GCTCGTCAGGGTGTATCCCTGGCTGCCAAGGTTGATGGTGTCAAGTCGCGACTCTAG

Peptide Sequence

PEP ID

OQU77847
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:44791313:44800404:1 gene:SORBI_3009G111400 transcript:OQU77847 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MARGTTTMEVRADGVAVITISNPPVNALSLDVIASLQRNYTEALSRNDIKAIVLTGAKGR
FCGGFDISAFGKKPKNEKPGSMSIDFLTDIVEDAHKPSVAAIDGIALGGGLELAMVCHAR
ISTPSAQLGLPELQLGIIPGLGGTQRLPRLVGLPKAIEMMLMSKTIKGMGAQELGLVDAV
TSANELVNAACSWALEIVEKKKPWFRSLHRTDKLPDLAEVKDVLKFARVQAKMKGANVQH
PIVCIDVIEEGIVSGPRAGLMKETLSGKMLEQSQTSKSLRHFFFAQRATSKIPNITNMGL
TARKIKKAAIIGGGLMGSGIATILILNNFSVVLKEVNEEFLSTGINRIKANLQSFVKKGQ
LAIEDYKKKLSLLCGVLDYEQFRDTDVVIEAVIEDMFLKQQIFSDLEKYCHHNCIFATNT
STIDLNIIGEKTASQDRIVGAHFFSPAHVMPLLEIVCTHHTSSQVIVDLLDLAKKIQKTP
IVVGNCTGFAVNRMFFPYAQAACFLVDHGLDVYHTDHVITQFGMPMGPFRLADLVGFGVA
IATRKQYYQSYPGRCYKSMILQILVEDNRTGESSRKGFYVYDNKRKASRDPDLGKYIEKS
RNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDEGIALKASDLDVASIMGMGFPSY
RGGLMFWADSLGAKYVYDRLDAWSKDYGEFFRPCEYLAVRARQGVSLAAKVDGVKSRL

Transcript Sequence

Transcript ID

OQU77847
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:44791313:44800404:1 gene:SORBI_3009G111400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTTCTTCAGTTCGTTTCGCCGCTGTGGGTGATTATTGTTGTAGGCCTAAATCATGCAACC
GTGGATGGTGGCCTGATGAACACGGCTCCACGCTAAAGGCTTGTGAACCATGGCAAATCG
ACTATAAAAAAAATTATCTGAATATCTTTTCTTTTTCATTTATTATTAAAATTCATAGAT
CGTCCGCGGCACCTACGCCAAATAATTTATATATATACCCCCGTGAACCACGTGGTGTGA
TGAATCACCAACTCATGGTTACATCACTGTTAGTCTGTCACACAGGGCAAATCCAGGTGA
TACGCCACTAAATTTTTAGCTGTACACAAATCATACGCCATAATCTCTGAGAAAACTATT
ATGATTTTTTTTTGAATAAATACGAGCAGGTCAGAATGCTGGCCTCGTGAGATCCGCTGT
GCAATTTGCAAATCCTGGCTGACACAAGCATATACGCCCACAAAACCCAGGTGACGCCGA
GAGGCCGGAACCTCTCCACTCCTGCTCCGCAGCATTGCCGTCGCCGTCGCCGTCGCCGAA
GATGGCGAGGGGCACCACCACCATGGAGGTGCGCGCAGACGGCGTCGCCGTCATCACCAT
CTCCAACCCGCCCGTCAACGCCCTCTCCCTCGACGTCATTGCTAGTTTGCAGAGGAACTA
TACAGAGGCTCTAAGCAGGAATGATATCAAGGCAATCGTCCTCACTGGTGCCAAAGGAAG
GTTCTGCGGCGGATTCGATATATCTGCGTTTGGAAAGAAGCCAAAAAATGAGAAGCCTGG
ATCCATGTCTATTGATTTCTTGACTGACATAGTGGAAGATGCACATAAACCGTCAGTGGC
TGCTATAGATGGCATTGCTCTAGGAGGTGGGTTGGAGCTTGCTATGGTTTGCCATGCTCG
CATTTCAACACCATCAGCTCAATTAGGACTACCTGAACTTCAACTTGGAATCATTCCTGG
ACTGGGAGGGACGCAGCGCCTTCCCCGTCTTGTTGGCCTGCCAAAAGCCATTGAGATGAT
GTTGATGTCAAAGACTATAAAAGGCATGGGGGCACAAGAACTCGGCTTAGTTGATGCTGT
TACTTCAGCTAATGAATTGGTCAACGCTGCCTGTTCCTGGGCTCTAGAAATTGTTGAAAA
GAAGAAACCATGGTTCAGAAGTCTCCACAGAACTGATAAACTTCCAGATCTTGCGGAAGT
GAAGGATGTTCTGAAATTTGCAAGAGTTCAAGCTAAAATGAAGGGTGCTAATGTTCAGCA
TCCCATAGTTTGCATTGATGTTATTGAAGAAGGAATAGTCTCTGGCCCTCGTGCAGGTCT
CATGAAGGAAACTCTGTCTGGTAAAATGCTTGAGCAGTCTCAAACAAGCAAAAGCTTAAG
ACACTTTTTTTTCGCTCAGCGTGCTACTTCAAAGATTCCAAATATTACCAACATGGGTTT
GACAGCACGGAAAATTAAAAAGGCAGCTATCATTGGGGGTGGTCTAATGGGATCAGGCAT
TGCAACAATATTGATATTGAACAACTTCAGTGTTGTCTTGAAAGAAGTAAATGAAGAGTT
CTTATCTACTGGCATTAACAGAATTAAAGCCAATTTGCAGAGTTTCGTCAAAAAGGGTCA
ACTTGCCATAGAAGATTATAAAAAGAAACTTTCTCTGTTATGTGGTGTTCTTGACTATGA
ACAGTTCAGAGATACAGATGTAGTCATTGAGGCAGTTATTGAGGATATGTTTCTTAAGCA
GCAAATATTTTCTGATCTTGAGAAGTATTGCCATCATAATTGCATATTTGCCACAAACAC
TTCAACTATAGACCTGAACATAATTGGTGAGAAGACAGCTTCTCAGGACCGGATTGTCGG
CGCACACTTCTTTAGCCCAGCTCATGTCATGCCACTGTTGGAAATAGTTTGTACTCATCA
TACTTCTTCTCAAGTTATTGTGGACCTGCTTGATTTGGCAAAGAAGATACAGAAAACACC
AATAGTTGTTGGCAACTGCACAGGTTTCGCTGTCAATCGGATGTTCTTTCCTTACGCTCA
GGCAGCTTGTTTTCTTGTTGATCATGGTCTGGATGTGTATCACACAGATCATGTGATCAC
ACAATTTGGAATGCCAATGGGGCCCTTCCGATTAGCTGATCTTGTTGGTTTTGGTGTTGC
TATTGCCACAAGGAAGCAATATTACCAGAGTTATCCTGGACGATGCTACAAATCAATGAT
TCTTCAGATTCTTGTTGAGGATAATAGGACAGGTGAATCTTCTCGTAAGGGCTTCTATGT
ATATGACAATAAGCGCAAAGCCTCTCGAGATCCTGATTTGGGAAAGTACATTGAAAAATC
AAGGAACATGGCAGGTGTTATGCAAGATCCTAAGCTGATGAAACTAACAGACAATGACAT
TGTGGAGATGATCTTCTTTCCTGTGGTGAATGAAGCCTGCCGAGTGCTTGATGAGGGAAT
TGCTCTCAAAGCATCTGACCTTGATGTAGCTTCCATTATGGGGATGGGTTTCCCTTCTTA
CAGGGGTGGACTAATGTTTTGGGCCGACTCGCTTGGTGCGAAATATGTGTACGACAGACT
GGATGCATGGTCGAAGGATTACGGGGAGTTCTTCAGACCCTGTGAATATTTAGCTGTGAG
AGCTCGTCAGGGTGTATCCCTGGCTGCCAAGGTTGATGGTGTCAAGTCGCGACTCTAGGG
TTTTGTTGTTCATTTGTCCGGTCATGCTTATACAGACTTGGGCCTCGGTGTCATTGAGTT
GTTGTGAAAACCCTTGAGCATCAGGAATTGGACTGTCACAATCATGCAGTTGCAAAACCT
GCACAAGTGAATGATAGGGAGCCTAGCGAAGTAGAAATTGCATGTGCCTTCGTGGGATTG
CTGAGGATCTACAGCAGGAATTTCACTGAAATATTATTTGCAGTTTGTTGAAGTGATGCC
CGCAACTTTGCATAGAATAGTTAGAGCAACTCTAAGAGCTTGACTAAAATTAGTAGCCAA
ATTCCATTATTTAACCATTTTGTAAAATATAAAACTTCTTAGAAAAGAAGAGGTTCATAA
TAGCCGTGCTATTTTACAAAATTGGATAGCTAATGTCAGTGATTGGCTATATATAACCAC
TGAACAATTTTTTATTTTATAAAACCTGATAGTATATTTGTTGGAGTCCTTTTTGCTAAA
GCTTACTTTTTGCAATGCAAATTTTAAAATAACCTTCATAACAAGAATATACAAGCTGTT
GGAGTTGCTCTTATAGGGAGTTTCTCCTAAACGTTATGGGACATTTAAACTTTGTTGCAG
TAGACTATTATTATTTTTTAAAATAAAATTCGTGGAAAGCATAACCCCTCTCTAACGGAA
ACAAAGAACACAGAGCTGATAAACACCCTGATCCTGTTTAGATACATTAATTGCTAATAG
TTACTACCAAGATATCAGCAATTGTGAGTAGCAAGCGGGAATTGCTTTCAAGATATCAGA
TAGGGAATTGCTTTCACAGTTGCACACAACATCATAGCTTCCAGTCTATGAAAAATTCCT
ATTGTAGCAATTGTATTCACGTACCCCAATCCATTGGATGATAAGATGTTGCATGATGCC
TCAATCTCACTCCCTTCAAAATTAACTATTTTGTGTAGTAGTTCATGTTGCATCTTTTCA
GCAAAACATCTCAACTCATGTATATAGGGCAAACACCATGGCTAATGGACACACCATCTT
GATAACATCCATTCCTAGGAAATATTACTATTATTCCCAAGCAGCCAATCTGGCCAAACT
GCCACTGAAACAAAGCTTGTTGTATAGGAGCATTGCATGAGTAGAGTGACATTTTTGTTT
TGAAAACACGATAATACTTGTTGCTGATGGCAAGAGAGGTTTCCTATATTTACGTGGCAA
CTGAAGAACTTCTCCGACATCAACATGAGAAAAGGAAACGGGAGAAAACATCAATGCCAC
TGCATTTGCCTGTATCATGGCAACACGTGCAGATGCACGAACATTGAAACCGTTATGGGT
TTCATCTCTTGTATCAGTGCAATGCACCCATGTGGATTTCTAAAATAGTTGAATCGACCG
CGTCATGCATCAACATAGAAGATGATGTGGCATGCTGAAGTCTTCTGAGATTTATGAACA
AAAAATAATGTCGATATGTTACCCATCCACCATCGTATGTAGAGACCAAT