Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77811
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:42950554:42952760:-1 gene:SORBI_3009G106500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGGCACCACTCAGCTCTTCATCCACCGTTTCTTCAATTGCAAAGAAGGCGCGCTCT
TCGCCATTGCTATTGGCATTGGCGCTCTGCCTACTTTGCTTCTCCTTCCTCTACGGCGAG
GACCTCAAGGAGCTCCTCGCTCGCCATGGCGAGGAAGCATCACGCCTCATCGCCAACACC
TACAGCACCAACATTTTTGAGCACGAGCAATCGACAGCACCACCACCCTCCGAGGTTGCC
GCGACGACGAAGAGGAAGTGGAAGGGGAGGCTTGCGTTCGCGCTGAACGACGAGGACGAG
GACGAGGAGTGCGACGTGTTCTCGGGAACCTGGGTGCGTGACGACGCCGAGCACCCGCTG
TACCGCGAGGAGGCGTGTCCCTACATCCATCCGCAGCTGACCTGCCAGGCGCGGGGGCGG
CCGGACACGGCGTACCAGCGGTGGCGGTGGCAGCCGGACGACTGCACGCTGCCGGCGTTC
GACGCCGTCCGGATGCTGGAGGCGCTGCGCGACAAGCGGATGCTGTACGTGGGCGACTCG
CTGGGGCGTGGCCAGTTCGCGTCCATGGTGTGCCTGCTGCAGTCCGCCATCCCCGACGCC
GGCGCCGGCGCCAGGTCGTCGTTCGAGATGTCGGCGGACCAGCAGCACACCGTGTTCACC
GCCAGGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCGTTCCTGCTGGAGTCCAAC
TCCGACAACGCCGCCGTCCACCGGATCTCCGAGCGCATGGTGCGGCGCGGTTCCATCGGC
TACCATGGCCGCCACTGGGAGGGCGTCCACGTCATCGTCTTCAACACCTACCTGTGGTGG
TGCACCGGCCTGCGCTTCAGGATATTGAACGGGCCGTGGGAGGACGCCGGCAAGGAGACG
GCGTGGGAGTGGGTGTCGACGGAGGAAGCGTACGGCATGGCGTTCCGGGACATGCTGCAG
TGGGTCAGGGACAACATGGACTTCAACAGCACCAGGGTCTTCTTCACCAGCATGTCACCC
ACGCACCAGAAGAGTCAGGACTGGGGCGACGCGCCGGGCGGCAACTGCTACAACGAGACG
ACGATGATCGAGGACCGCGGGTACTGGGGCTCGGACGGCCGCCGGAGCGTGATGCAGGTG
ATCCGGGAGATCCTGGACGGCGACGGCGCCGACGTGCCGCTCACGTTCCTCAACATCACG
CAGATGTCCATGTACCGCAAGGACGCGCACACCTCCATCTACAAGAAGCAGTGGAGCCAA
CCCACGGCGGCGCAGCTGGCGGACCCCAAGACGTACGCCGACTGCGTCCACTGGTGCCTC
CCGGGCCTCCAGGACACGTGGAACGAGCTCCTCTACTCCAAGCTCTTCTACCCTTAG

Peptide Sequence

PEP ID

OQU77811
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:42950554:42952760:-1 gene:SORBI_3009G106500 transcript:OQU77811 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKAPLSSSSTVSSIAKKARSSPLLLALALCLLCFSFLYGEDLKELLARHGEEASRLIANT
YSTNIFEHEQSTAPPPSEVAATTKRKWKGRLAFALNDEDEDEECDVFSGTWVRDDAEHPL
YREEACPYIHPQLTCQARGRPDTAYQRWRWQPDDCTLPAFDAVRMLEALRDKRMLYVGDS
LGRGQFASMVCLLQSAIPDAGAGARSSFEMSADQQHTVFTAREYNATVEFYWAPFLLESN
SDNAAVHRISERMVRRGSIGYHGRHWEGVHVIVFNTYLWWCTGLRFRILNGPWEDAGKET
AWEWVSTEEAYGMAFRDMLQWVRDNMDFNSTRVFFTSMSPTHQKSQDWGDAPGGNCYNET
TMIEDRGYWGSDGRRSVMQVIREILDGDGADVPLTFLNITQMSMYRKDAHTSIYKKQWSQ
PTAAQLADPKTYADCVHWCLPGLQDTWNELLYSKLFYP

Transcript Sequence

Transcript ID

OQU77811
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:42950554:42952760:-1 gene:SORBI_3009G106500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTTAGAACCTCTCAGATGTTCCTAAGCTGCCAGTTGCCAGAATTTGACAGTTCCAACG
AAGCCGTCCTGCACACACCGTTTGTTTATTGGTGCAGCCGCTCCAAATTTCATATTACTC
TCTTCAGACAACGACAAGACAACCTGTAAGACCACTGTGTTGGCAACTAATCCGGCTTTT
ATATATATAATCCTATCCTACGAGAATCTTTGCCCCAGGCATAATGCTCAAGCTTGCAAC
CAAAGAGATCACTTGATCAGAGATGAAGGCACCACTCAGCTCTTCATCCACCGTTTCTTC
AATTGCAAAGAAGGCGCGCTCTTCGCCATTGCTATTGGCATTGGCGCTCTGCCTACTTTG
CTTCTCCTTCCTCTACGGCGAGGACCTCAAGGAGCTCCTCGCTCGCCATGGCGAGGAAGC
ATCACGCCTCATCGCCAACACCTACAGCACCAACATTTTTGAGCACGAGCAATCGACAGC
ACCACCACCCTCCGAGGTTGCCGCGACGACGAAGAGGAAGTGGAAGGGGAGGCTTGCGTT
CGCGCTGAACGACGAGGACGAGGACGAGGAGTGCGACGTGTTCTCGGGAACCTGGGTGCG
TGACGACGCCGAGCACCCGCTGTACCGCGAGGAGGCGTGTCCCTACATCCATCCGCAGCT
GACCTGCCAGGCGCGGGGGCGGCCGGACACGGCGTACCAGCGGTGGCGGTGGCAGCCGGA
CGACTGCACGCTGCCGGCGTTCGACGCCGTCCGGATGCTGGAGGCGCTGCGCGACAAGCG
GATGCTGTACGTGGGCGACTCGCTGGGGCGTGGCCAGTTCGCGTCCATGGTGTGCCTGCT
GCAGTCCGCCATCCCCGACGCCGGCGCCGGCGCCAGGTCGTCGTTCGAGATGTCGGCGGA
CCAGCAGCACACCGTGTTCACCGCCAGGGAGTACAACGCGACGGTGGAGTTCTACTGGGC
GCCGTTCCTGCTGGAGTCCAACTCCGACAACGCCGCCGTCCACCGGATCTCCGAGCGCAT
GGTGCGGCGCGGTTCCATCGGCTACCATGGCCGCCACTGGGAGGGCGTCCACGTCATCGT
CTTCAACACCTACCTGTGGTGGTGCACCGGCCTGCGCTTCAGGATATTGAACGGGCCGTG
GGAGGACGCCGGCAAGGAGACGGCGTGGGAGTGGGTGTCGACGGAGGAAGCGTACGGCAT
GGCGTTCCGGGACATGCTGCAGTGGGTCAGGGACAACATGGACTTCAACAGCACCAGGGT
CTTCTTCACCAGCATGTCACCCACGCACCAGAAGAGTCAGGACTGGGGCGACGCGCCGGG
CGGCAACTGCTACAACGAGACGACGATGATCGAGGACCGCGGGTACTGGGGCTCGGACGG
CCGCCGGAGCGTGATGCAGGTGATCCGGGAGATCCTGGACGGCGACGGCGCCGACGTGCC
GCTCACGTTCCTCAACATCACGCAGATGTCCATGTACCGCAAGGACGCGCACACCTCCAT
CTACAAGAAGCAGTGGAGCCAACCCACGGCGGCGCAGCTGGCGGACCCCAAGACGTACGC
CGACTGCGTCCACTGGTGCCTCCCGGGCCTCCAGGACACGTGGAACGAGCTCCTCTACTC
CAAGCTCTTCTACCCTTAGGCGTCGTTCGTACCATATTCCCAACCTAGTTAGGCCAGGTA
GTGCTATTCAAAATACTGAAGAAATGACGGGACAGGGCAGGATCGGTGATAACCGAACGA
GGTCTTAGTTTTGTTACATACATAGTGCAAAACAAAAGTCCATGAGATGTTGGTACAGAG
ACACACGGACATCAATCTTTTCTCCTTCAAATTTCGAATCAAATGAGTTTTGGGCTGATC
TAACGATATAGATGAATCAACTTGCATTCTTAATGTTAACTCATGACCAAGAAAAATATA
GTTTCAATGGAAGT