Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77653
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:13444431:13447142:-1 gene:SORBI_3009G084400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGCATGCAGGACGACGCCTCCGACGACGGCGGCATCCCCGTCGTCGAGGCGCCGGCA
AAGCGCCCGCCCCTTAACAAGTACGCCCTCGCCTGCGCCGTCCTCGCTTCCATGAACTCC
ATCCTCCTCGGCTACGATGGGGCAGTGATGAGCGGAGCACAGCTATTCATCAAGGAGGAC
CTCAAGATCAGTGACACAAAGATCGAGGTCCTCGCCGGCATCATCAGCATCTCCTCGCTC
GTCGGCTCGCTCGCGGCGGGCCGGACGTCCGACTGGATCGGCCGGCGGTACACCATGGTT
CTGGCGGCGGCCATCTTCTTGGCGGGCGCGCTCATCATGGGCCTCGCCCCGGGCTACGGG
GTCCTCATGCTGGGCCGCTGCGTGGCGGGCGTCGGCGTCGGGTACGCGCTCATGGTCGCG
CCCGTGTACACGGCCGAGGTCTCGCCCACGTCGGCGCGCGGCCTGCTCACGTCCTTCCCG
GAGGTGTTCATCAACACGGGGGTGCTCCTCGGGTACGTGTCCAACTACGCCTTCCACAGT
CTCCCCGTGCACCTCAGCTGGCGCGTCATGTTCCTCGTCGGCGCCGTCCCGCCGCTCTTC
CTCGCCCCGGGGGTCCTCGCCATGCCTGAGTCGCCGCGGTGGCTCGTCATGCAGGGCCGC
ATCGGCGACGCGCGCCGCGTGCTTGCCAAGACCTCCGACTCCCCCGCCGAGGCCGAGGAG
CGGCTCGCCGACATCAAGAAGGCCATCGGCATCCCTGACGGCATCGGTGACAATGCCGCC
GCCGACGACGACGACGTGGTGGTAGTCGCTCGCAGGAGCAAGCAGGGCAGCCATGGCGAA
GGGGTGTGGAGGGACCTCCTCATCCGCCCGACGCCGCCCGTGCGCCGCATACTGATCGCC
TGTCTCGGCCTCCAGTGCTTCCAGCAGGCCTCCGGCATCGACTCCGTGGTGCTGTACAGC
CCGAGAGTGTTCGAGAAGGCCGGGCTCAGGTCGGACAATAACTCCCTGGGCGCCACCATG
GCGGTGGGTGCGTCCAAGACGCTGTTCATCCTGGTGGCCACGTTCTTCCTCGACCGTGTC
GGGCGGAGGCCGCTGCTGCTCACGAGCGCGGGCGGGATGGTGGTGTCCCTGGTGACGCTG
GCCTCGGCGCTGCACGCCATCGACCGGCTCCCCGAGGGGCATGCGACGCCGCTGGCGGGC
GTGAGCATCGCGGCGGTGCTCACGTTCGTTGCGTCCTTCTCCATCGGCATGGGCCCCATC
GCGTGGGTGTACAGCTCGGAGATCTTCCCGCTGCGACTCCGCGCGCAGGGCTGCGCGCTC
GGCACGGCAATGAACCGGATCATGAGCGGCGCCATCACCATGTCCTTCATCTCGCTCTAC
AAGGCCATCACCTTGGCCGGGAGCTTCTACCTGTATGCCGGCATCGCTGCTGCCGGCTGG
CTGTTCATGTTCTTCTTCCTTCCGGAGACGAGGGGCAGGAGCCTGGAGGACACCGAGAAG
CTCTTCGGCGGTGGAGACCACGGCGAGGACGAGGAAGATGGACACGATGGGCAGAACAAG
TCCACTGAGAGTTGA

Peptide Sequence

PEP ID

OQU77653
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:13444431:13447142:-1 gene:SORBI_3009G084400 transcript:OQU77653 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MCMQDDASDDGGIPVVEAPAKRPPLNKYALACAVLASMNSILLGYDGAVMSGAQLFIKED
LKISDTKIEVLAGIISISSLVGSLAAGRTSDWIGRRYTMVLAAAIFLAGALIMGLAPGYG
VLMLGRCVAGVGVGYALMVAPVYTAEVSPTSARGLLTSFPEVFINTGVLLGYVSNYAFHS
LPVHLSWRVMFLVGAVPPLFLAPGVLAMPESPRWLVMQGRIGDARRVLAKTSDSPAEAEE
RLADIKKAIGIPDGIGDNAAADDDDVVVVARRSKQGSHGEGVWRDLLIRPTPPVRRILIA
CLGLQCFQQASGIDSVVLYSPRVFEKAGLRSDNNSLGATMAVGASKTLFILVATFFLDRV
GRRPLLLTSAGGMVVSLVTLASALHAIDRLPEGHATPLAGVSIAAVLTFVASFSIGMGPI
AWVYSSEIFPLRLRAQGCALGTAMNRIMSGAITMSFISLYKAITLAGSFYLYAGIAAAGW
LFMFFFLPETRGRSLEDTEKLFGGGDHGEDEEDGHDGQNKSTES

Transcript Sequence

Transcript ID

OQU77653
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:13444431:13447142:-1 gene:SORBI_3009G084400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCTTTCATTGACGCCGGCAATGCCGCTCCGTTGAAGGTGAAGAGGCTAGTGAGCCACAG
ACAGAGACAGCCCATACGCAGACGCAGGTCACTGTTCCTAGTCTCCTGCACGAGCTCAGT
CCTTGAGTCAAACCCGTCTCGACAGCCCGGACTGCCTCATCTGGCTGCTACAGCTGCCTT
GTATATAGAGCTGTAGTAGCTGTAGTAGTAGTCACAGATTGGTTTTGTTTGCTGAAGAAA
AGACTGGCACTTAGTCATTGGACTCGTCTTGGTGTGCTTTGTTCACCATACTGCTTCAGT
TCACAGTTTGTGAAGAAATTATCGTTGCCTGTGACAGCCGTTTTGATTCTCGCTCCAGGT
GCCAACTTGGAAGTGGTGACACCGCGACAACGGGCGACGGCTCTCCACCAGTGCGTCTCT
TCCGCCTTCGCCATGTGCATGCAGGACGACGCCTCCGACGACGGCGGCATCCCCGTCGTC
GAGGCGCCGGCAAAGCGCCCGCCCCTTAACAAGTACGCCCTCGCCTGCGCCGTCCTCGCT
TCCATGAACTCCATCCTCCTCGGCTACGATGGGGCAGTGATGAGCGGAGCACAGCTATTC
ATCAAGGAGGACCTCAAGATCAGTGACACAAAGATCGAGGTCCTCGCCGGCATCATCAGC
ATCTCCTCGCTCGTCGGCTCGCTCGCGGCGGGCCGGACGTCCGACTGGATCGGCCGGCGG
TACACCATGGTTCTGGCGGCGGCCATCTTCTTGGCGGGCGCGCTCATCATGGGCCTCGCC
CCGGGCTACGGGGTCCTCATGCTGGGCCGCTGCGTGGCGGGCGTCGGCGTCGGGTACGCG
CTCATGGTCGCGCCCGTGTACACGGCCGAGGTCTCGCCCACGTCGGCGCGCGGCCTGCTC
ACGTCCTTCCCGGAGGTGTTCATCAACACGGGGGTGCTCCTCGGGTACGTGTCCAACTAC
GCCTTCCACAGTCTCCCCGTGCACCTCAGCTGGCGCGTCATGTTCCTCGTCGGCGCCGTC
CCGCCGCTCTTCCTCGCCCCGGGGGTCCTCGCCATGCCTGAGTCGCCGCGGTGGCTCGTC
ATGCAGGGCCGCATCGGCGACGCGCGCCGCGTGCTTGCCAAGACCTCCGACTCCCCCGCC
GAGGCCGAGGAGCGGCTCGCCGACATCAAGAAGGCCATCGGCATCCCTGACGGCATCGGT
GACAATGCCGCCGCCGACGACGACGACGTGGTGGTAGTCGCTCGCAGGAGCAAGCAGGGC
AGCCATGGCGAAGGGGTGTGGAGGGACCTCCTCATCCGCCCGACGCCGCCCGTGCGCCGC
ATACTGATCGCCTGTCTCGGCCTCCAGTGCTTCCAGCAGGCCTCCGGCATCGACTCCGTG
GTGCTGTACAGCCCGAGAGTGTTCGAGAAGGCCGGGCTCAGGTCGGACAATAACTCCCTG
GGCGCCACCATGGCGGTGGGTGCGTCCAAGACGCTGTTCATCCTGGTGGCCACGTTCTTC
CTCGACCGTGTCGGGCGGAGGCCGCTGCTGCTCACGAGCGCGGGCGGGATGGTGGTGTCC
CTGGTGACGCTGGCCTCGGCGCTGCACGCCATCGACCGGCTCCCCGAGGGGCATGCGACG
CCGCTGGCGGGCGTGAGCATCGCGGCGGTGCTCACGTTCGTTGCGTCCTTCTCCATCGGC
ATGGGCCCCATCGCGTGGGTGTACAGCTCGGAGATCTTCCCGCTGCGACTCCGCGCGCAG
GGCTGCGCGCTCGGCACGGCAATGAACCGGATCATGAGCGGCGCCATCACCATGTCCTTC
ATCTCGCTCTACAAGGCCATCACCTTGGCCGGGAGCTTCTACCTGTATGCCGGCATCGCT
GCTGCCGGCTGGCTGTTCATGTTCTTCTTCCTTCCGGAGACGAGGGGCAGGAGCCTGGAG
GACACCGAGAAGCTCTTCGGCGGTGGAGACCACGGCGAGGACGAGGAAGATGGACACGAT
GGGCAGAACAAGTCCACTGAGAGTTGAGTAGTAGCAAGCAGTGACTTGATTTGCTAGTAC
TCCTTCGTCTATGAAATAATCAATTACTAGAGATTTCCTAAATCAAATTTTTTAAACTTT
AATTAAATTTTTTAAAAAATGCTAAAATCTATGATATCAAATTAGTATTATTAGATTTAT
CATACAATATATTTTCATAAAATACGTATTTTATGTCATAAATGTTTTTATTTTTTTATA
AAGTTAATCAAATTTAAAAAAAAATAATTGATACGGATTTTATAAACTAATTCTTTCGTA
GATAGAGGGAGTACGTAGCAACGTCAGTAGTATGTATAAGGTATAGTAAATTTTATCGCT
AAGGACATGGACATGTACCCTCGTATTGTCGACCATAAGATTCACGCTAAGATATAGATG
AGTTGGAAATGTTGTCTGATTTGTCAATCGGCAAGGGAACGTCATATTATCGCAAAGCTG
CATGAACTGAACGCATGCACAATCTGACATATCCTTTGTAGAAAAAGAAACTCTACTCAG
CGTGTTTCTCACTCTCCAACACTCAGATTTTTGACCCTGTCAACAAAACAAATCTGGC