Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77564
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:7495354:7500886:1 gene:SORBI_3009G068400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGACGGCCACCACTTCAACAATATCTCACTCGGCGGCCGTGGCGGCGGCAACCCT
GGGCAGTTCAAACTTTACTCCGGAGGCTTGGCATGGAAGAAGCAAGGAGGAGGAAAGATC
ATTGAGGTTGATAAAGGTGATATCACTTCTGTGGCTTGGATGAGGATTCCTAAATCTTAT
CAGCTTAGCGTTGGAACAAAGGAGGGCCTCTGTTACAGATTTTTTGGCTTTCGTGAACAG
GATGTTAGTAGCCTGACTAATTTCATAGAGAAGAGCACTGGAATCACACCAGAAGAGAAG
CAACTTTCTGTTACTGGGCATAATTGGGGCGGAATAGAAATAAATGGGAGTATGCTTTGC
TTTAATGTTGGTTCAAAGGAAGCGTTTGAAGTCTCTCTAGCAGATGTGGCACAGACTCAG
ATGCAAGGGAAAACAGATGTTGTCCTAGAGTTCCATGTAGATGATACTACTGGGGCAAAT
GAGAAAGATTCTTTGATGGATTTAAGTTTCCATGTTCCGACTTCAAATACGCAATTCGTT
GGAGATGAGCATCGTACTTCAGCTCAGATGTTATGGCAGGCTATCTCGGTTGAAATTGAT
GGTGGTGGCTCATCAGAGATGGCTGTTGTTACATTTGATGGAATTGCAATTCTTACACCA
AGGGGTCGATACAGTGTTGAGCTTCATCAGTCATTCTTGCGACTCCAAGGACAAGCTAAT
GATTTCAAAATCCAATATAGTAGTATTCTTCGCCTATTTGTTTTACCAAAGTCACACAAT
CCACATACCTTTGTGGTTATCACACTTGATCCACCAATTCGGAAAGGGCAAACTTTATAT
CCTCACATTGTTATTCAGTTTGAGACAGAGGCAGTGGTTGAAAGGGAACTGGCATTAAGT
GGTGAGGTTTTGGCTGAGAAGTACAAGGATAGGCTTGAGAGCTCTTACAGGGGTCTAATA
CATGAGGTATTCTCCAAGGTCCTTCGTGGCTTATCTGGTGCTAAAGTGACAAGGCCAAGT
ACATTCCGCAGTTGCCAAGATGGATATGCAGTCAAATCATCACTTAAAGCTGAAGATGGT
TTGCTTTATCCACTCGAAAAGGGCTTCTTCTTTCTGCCAAAGCCCCCAACACTAATTCCT
CATGATGAGATTGAGTATGTTGAGTTTGAGCGTCATGGTGCTGGAGGTGCAAGCATATCA
TCTCATTACTTCGACCTTTTGGTTAAGCTCACAAATGATCAAGAACATCTCTTCAGAAAC
ATCCAAAGGAATGAATACCATAACCTCTTCAACTTCATCAGTGGTAAGCATTTGAAAATT
CTGAATCTTGGAGATGGCCAAGGTAGAACTAGTGGTGTTACTGCTGTTCTTCAGAGCACG
GATGATGATTCTGTTGATCCACATCTGGAGCGGATAAAAAATCAGGCTGGTAATGATGAA
AGCGATGAAGAGGATGAAGATTTTGTGGCAGACAAGGACGATAGTGGATCTCCAACGGAT
GATTCTGATGCGGATGGCTCTGATGCTAGTATGAGTGGAGGAGACAAGGAGAATATCAAG
AGCAGCAATCCTGAACTGGCTACCACAGAGATTGCAAAGAAGCTCGGAGAAAGGTGGCAA
AAGATGACAGCTGAGGAGAGGCAGCCATATGTGGAGCAGTCCCAAGTCGACAAGCAACGC
TATGCAGAAGAGTCTGCAGCTTACCGTGGTGCAGCCGCTCAGCAGGGCTCTGGTGCTGGA
TCGGAATGA

Peptide Sequence

PEP ID

OQU77564
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:7495354:7500886:1 gene:SORBI_3009G068400 transcript:OQU77564 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADGHHFNNISLGGRGGGNPGQFKLYSGGLAWKKQGGGKIIEVDKGDITSVAWMRIPKSY
QLSVGTKEGLCYRFFGFREQDVSSLTNFIEKSTGITPEEKQLSVTGHNWGGIEINGSMLC
FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDEHRTSAQMLWQAISVEIDGGGSSEMAVVTFDGIAILTPRGRYSVELHQSFLRLQGQAN
DFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERELALS
GEVLAEKYKDRLESSYRGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDG
LLYPLEKGFFFLPKPPTLIPHDEIEYVEFERHGAGGASISSHYFDLLVKLTNDQEHLFRN
IQRNEYHNLFNFISGKHLKILNLGDGQGRTSGVTAVLQSTDDDSVDPHLERIKNQAGNDE
SDEEDEDFVADKDDSGSPTDDSDADGSDASMSGGDKENIKSSNPELATTEIAKKLGERWQ
KMTAEERQPYVEQSQVDKQRYAEESAAYRGAAAQQGSGAGSE

Transcript Sequence

Transcript ID

OQU77564
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:7495354:7500886:1 gene:SORBI_3009G068400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TATACACATGCGCCGCCCGCACCTCATGCATATGGCCAATCGCAACCCCGCATTGGAGCC
GCATCAAATAGAGCCACACCGAGGCGACGCGCGCAGACCCGGGCGAGGCGACGCGCAGTG
AGACCACGTCGGGATTTTCTCTCGACGGCGATCGCTGTGCGCGTGACAATCAGCGAGCGA
GATATGGCGGACGGCCACCACTTCAACAATATCTCACTCGGCGGCCGTGGCGGCGGCAAC
CCTGGGCAGTTCAAACTTTACTCCGGAGGCTTGGCATGGAAGAAGCAAGGAGGAGGAAAG
ATCATTGAGGTTGATAAAGGTGATATCACTTCTGTGGCTTGGATGAGGATTCCTAAATCT
TATCAGCTTAGCGTTGGAACAAAGGAGGGCCTCTGTTACAGATTTTTTGGCTTTCGTGAA
CAGGATGTTAGTAGCCTGACTAATTTCATAGAGAAGAGCACTGGAATCACACCAGAAGAG
AAGCAACTTTCTGTTACTGGGCATAATTGGGGCGGAATAGAAATAAATGGGAGTATGCTT
TGCTTTAATGTTGGTTCAAAGGAAGCGTTTGAAGTCTCTCTAGCAGATGTGGCACAGACT
CAGATGCAAGGGAAAACAGATGTTGTCCTAGAGTTCCATGTAGATGATACTACTGGGGCA
AATGAGAAAGATTCTTTGATGGATTTAAGTTTCCATGTTCCGACTTCAAATACGCAATTC
GTTGGAGATGAGCATCGTACTTCAGCTCAGATGTTATGGCAGGCTATCTCGGTTGAAATT
GATGGTGGTGGCTCATCAGAGATGGCTGTTGTTACATTTGATGGAATTGCAATTCTTACA
CCAAGGGGTCGATACAGTGTTGAGCTTCATCAGTCATTCTTGCGACTCCAAGGACAAGCT
AATGATTTCAAAATCCAATATAGTAGTATTCTTCGCCTATTTGTTTTACCAAAGTCACAC
AATCCACATACCTTTGTGGTTATCACACTTGATCCACCAATTCGGAAAGGGCAAACTTTA
TATCCTCACATTGTTATTCAGTTTGAGACAGAGGCAGTGGTTGAAAGGGAACTGGCATTA
AGTGGTGAGGTTTTGGCTGAGAAGTACAAGGATAGGCTTGAGAGCTCTTACAGGGGTCTA
ATACATGAGGTATTCTCCAAGGTCCTTCGTGGCTTATCTGGTGCTAAAGTGACAAGGCCA
AGTACATTCCGCAGTTGCCAAGATGGATATGCAGTCAAATCATCACTTAAAGCTGAAGAT
GGTTTGCTTTATCCACTCGAAAAGGGCTTCTTCTTTCTGCCAAAGCCCCCAACACTAATT
CCTCATGATGAGATTGAGTATGTTGAGTTTGAGCGTCATGGTGCTGGAGGTGCAAGCATA
TCATCTCATTACTTCGACCTTTTGGTTAAGCTCACAAATGATCAAGAACATCTCTTCAGA
AACATCCAAAGGAATGAATACCATAACCTCTTCAACTTCATCAGTGGTAAGCATTTGAAA
ATTCTGAATCTTGGAGATGGCCAAGGTAGAACTAGTGGTGTTACTGCTGTTCTTCAGAGC
ACGGATGATGATTCTGTTGATCCACATCTGGAGCGGATAAAAAATCAGGCTGGTAATGAT
GAAAGCGATGAAGAGGATGAAGATTTTGTGGCAGACAAGGACGATAGTGGATCTCCAACG
GATGATTCTGATGCGGATGGCTCTGATGCTAGTATGAGTGGAGGAGACAAGGAGAATATC
AAGAGCAGCAATCCTGAACTGGCTACCACAGAGATTGCAAAGAAGCTCGGAGAAAGGTGG
CAAAAGATGACAGCTGAGGAGAGGCAGCCATATGTGGAGCAGTCCCAAGTCGACAAGCAA
CGCTATGCAGAAGAGTCTGCAGCTTACCGTGGTGCAGCCGCTCAGCAGGGCTCTGGTGCT
GGATCGGAATGAAGGTTCAGTCATTTCGACAGTTAGCTGCAGGGCTGGATTGTTGAGTTA
TCAGAATGGGCGGGAATTTTTACCTTAGCTTTTGAATCATGCATCCAATCTATCTTAGCT
TGTGTCACTATTAATATTTATTGACTAGAATACCCTAAAGTCGAAGCTGAATGGCGTCCT
TTGACATTAGGTTTAGAAATTTTCTGCTGGCTTGCCCAAGAATTCCCCTCTCTTGATGCT
CTGTTCAGTGAGGGGGAGGGTTGGTCAACAGTTAAGCAAATCCCGCGGGATAGGAAAAAA
TGCAGCCAAATTTCAGAGAAGTACAACTATTT