Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77424
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:4492009:4496745:-1 gene:SORBI_3009G047600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATGTCGTCGATGCTGCCACTGCCACTGCCAGCAGCATCATCCTCGCCGGAAACGCA
GACAGTACCAGTAATGCAGTAGTAGCCATGCTCATCACCCTCGTTGCCGTCGTCGTCGTC
GTCCTCCTCTTCATCACCACGATGTCGTCGTCAGTCGTCGGCACAAGGGGCAGCAAGCAG
GGCGATAACAATAAGCTTCCCCCGAGCCCACCGGGGCTTCCATTGCTGGGGCACCTCCAC
CACCTCATTCGTCCTCCCCCGCACCACGCCTTCCACCGCCTCGTCCGCCGCTACGGCCCC
TTGGTGTACCTCCGCCTCGGTCCTTCAAACCACGCCGTCGTCGTTGGCTCCGCCGAAGCC
GCGCGAGACCTCCTGAGGTTGGAGGCCAGCATCCCCCAGCGGGGACACTCGGCGGTGACC
AGCCTCCTGGCGTACGGCACCGCCGGCTTCGCGTTCGCGCCCTACGGCGACCAGTGGCGC
TTCATGAAGCGCCTGTGCATGTCGGAGCTGCTGGGAGCTCGGACGCTGGACCTGCTGCGC
CCCGTCCGCGACGGCGAGCTCGCCGCCGTGCTGCGGGAGGCGGCGGCGGCGGCGGGGCGG
GGAGGCGGCAGCATCGACCTCAGCGCGCAGCTCATCGCCATGGCCAACAACGCCATCATG
CGCATGACGGCCAGCGCGCTGCCCGACCACTTGACGGAGACGGCGCGGCACTGCGCCAAG
GAGGTGACGGAGCTCGTCGGTACCTTCAACATCGCCGACTACATCTCGCTCTTCCGCCCA
TTTGATCTGCAGGGACTCGACCGGAGGGCGCACGAGGTTCACGCCAAGTTCGACGCGCTA
CTTGAGATCTTGATCAAGAAAAAGGAGGAGGCACGTCGTCGTCCACAACCGACGACGACG
CCGACGACGACGGAGGCCAAGGACTTGCTGGATATACTCATGGATGCCGCAGAGGACGAG
AACGCAGAGGTGAAGCTCACAAGAGAGAACGTAAAGGCCTTTGTCCTGGACATCTTCACG
GCGGGGTCGGACACCACAGCAACGACGGTGGAGTGGATGCTTGCAGAGCTGATGAACCAC
CCAGCCTGCATGGAGAAGCTGCGAGCAGAGCTTGACGCCATGATCGGCAACTCACGGCTC
GTCGGCGAGGAGGACGTGGCGAAGCTGCCCTACCTGCAGGCGGTGCTCAAGGAGACTCTT
CGCCTGCATCCGCCGGCGGTGTTCGCGCTGCGGGAGACCATCGACACGGTGCACGTCCGT
GGCTACACCATCCCGCCCAACACCACCGTCATCTTCAGCGTCTACTCCGTGGGGCGTGAC
CCGGCGCACTGGGAGAAGCCGCTCGAGTTCAACCCGGAGCGCTTCATGCCCGGCGGCGCC
GGCGAGGGCGTGGAGGTCAATGCGCAGAGCATGCAGCTCATGCCCTTCGGCGGTGGCCGC
CGTGCGTGCCCCGGCATGGGATACGCCGTGCAGGTCGTGCCGGCGTTCCTCGCAGCGCTC
GTGCAGTGCTTCGACTGGTCGGTGCCTCACCAGCAGCAGCCGCAGGGGGGAAGAAACGAC
ATGGCGGCGGCGGCGCCGCCGCCGGCACTCAACATGGACGAAAAGAAGGGGCTTGTCTCG
GCTCGGCTGCACCCGCTCGTGCTCAACCCTACGCCGCGCCTCCATCCTATCCCCATGCCT
GCCTCCCTTTGCCGGCCTTTGATTTGA

Peptide Sequence

PEP ID

OQU77424
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:4492009:4496745:-1 gene:SORBI_3009G047600 transcript:OQU77424 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDVVDAATATASSIILAGNADSTSNAVVAMLITLVAVVVVVLLFITTMSSSVVGTRGSKQ
GDNNKLPPSPPGLPLLGHLHHLIRPPPHHAFHRLVRRYGPLVYLRLGPSNHAVVVGSAEA
ARDLLRLEASIPQRGHSAVTSLLAYGTAGFAFAPYGDQWRFMKRLCMSELLGARTLDLLR
PVRDGELAAVLREAAAAAGRGGGSIDLSAQLIAMANNAIMRMTASALPDHLTETARHCAK
EVTELVGTFNIADYISLFRPFDLQGLDRRAHEVHAKFDALLEILIKKKEEARRRPQPTTT
PTTTEAKDLLDILMDAAEDENAEVKLTRENVKAFVLDIFTAGSDTTATTVEWMLAELMNH
PACMEKLRAELDAMIGNSRLVGEEDVAKLPYLQAVLKETLRLHPPAVFALRETIDTVHVR
GYTIPPNTTVIFSVYSVGRDPAHWEKPLEFNPERFMPGGAGEGVEVNAQSMQLMPFGGGR
RACPGMGYAVQVVPAFLAALVQCFDWSVPHQQQPQGGRNDMAAAAPPPALNMDEKKGLVS
ARLHPLVLNPTPRLHPIPMPASLCRPLI

Transcript Sequence

Transcript ID

OQU77424
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:4492009:4496745:-1 gene:SORBI_3009G047600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGGAAGGTGCAATGCAACGACGATTATACGTAGTATTAGGCAGCAGCAGAGCACACAGG
CAACAGCGCTAAAGCTTGGCAGCCCCCAGCCCCAGCCATGGATGTCGTCGATGCTGCCAC
TGCCACTGCCAGCAGCATCATCCTCGCCGGAAACGCAGACAGTACCAGTAATGCAGTAGT
AGCCATGCTCATCACCCTCGTTGCCGTCGTCGTCGTCGTCCTCCTCTTCATCACCACGAT
GTCGTCGTCAGTCGTCGGCACAAGGGGCAGCAAGCAGGGCGATAACAATAAGCTTCCCCC
GAGCCCACCGGGGCTTCCATTGCTGGGGCACCTCCACCACCTCATTCGTCCTCCCCCGCA
CCACGCCTTCCACCGCCTCGTCCGCCGCTACGGCCCCTTGGTGTACCTCCGCCTCGGTCC
TTCAAACCACGCCGTCGTCGTTGGCTCCGCCGAAGCCGCGCGAGACCTCCTGAGGTTGGA
GGCCAGCATCCCCCAGCGGGGACACTCGGCGGTGACCAGCCTCCTGGCGTACGGCACCGC
CGGCTTCGCGTTCGCGCCCTACGGCGACCAGTGGCGCTTCATGAAGCGCCTGTGCATGTC
GGAGCTGCTGGGAGCTCGGACGCTGGACCTGCTGCGCCCCGTCCGCGACGGCGAGCTCGC
CGCCGTGCTGCGGGAGGCGGCGGCGGCGGCGGGGCGGGGAGGCGGCAGCATCGACCTCAG
CGCGCAGCTCATCGCCATGGCCAACAACGCCATCATGCGCATGACGGCCAGCGCGCTGCC
CGACCACTTGACGGAGACGGCGCGGCACTGCGCCAAGGAGGTGACGGAGCTCGTCGGTAC
CTTCAACATCGCCGACTACATCTCGCTCTTCCGCCCATTTGATCTGCAGGGACTCGACCG
GAGGGCGCACGAGGTTCACGCCAAGTTCGACGCGCTACTTGAGATCTTGATCAAGAAAAA
GGAGGAGGCACGTCGTCGTCCACAACCGACGACGACGCCGACGACGACGGAGGCCAAGGA
CTTGCTGGATATACTCATGGATGCCGCAGAGGACGAGAACGCAGAGGTGAAGCTCACAAG
AGAGAACGTAAAGGCCTTTGTCCTGGACATCTTCACGGCGGGGTCGGACACCACAGCAAC
GACGGTGGAGTGGATGCTTGCAGAGCTGATGAACCACCCAGCCTGCATGGAGAAGCTGCG
AGCAGAGCTTGACGCCATGATCGGCAACTCACGGCTCGTCGGCGAGGAGGACGTGGCGAA
GCTGCCCTACCTGCAGGCGGTGCTCAAGGAGACTCTTCGCCTGCATCCGCCGGCGGTGTT
CGCGCTGCGGGAGACCATCGACACGGTGCACGTCCGTGGCTACACCATCCCGCCCAACAC
CACCGTCATCTTCAGCGTCTACTCCGTGGGGCGTGACCCGGCGCACTGGGAGAAGCCGCT
CGAGTTCAACCCGGAGCGCTTCATGCCCGGCGGCGCCGGCGAGGGCGTGGAGGTCAATGC
GCAGAGCATGCAGCTCATGCCCTTCGGCGGTGGCCGCCGTGCGTGCCCCGGCATGGGATA
CGCCGTGCAGGTCGTGCCGGCGTTCCTCGCAGCGCTCGTGCAGTGCTTCGACTGGTCGGT
GCCTCACCAGCAGCAGCCGCAGGGGGGAAGAAACGACATGGCGGCGGCGGCGCCGCCGCC
GGCACTCAACATGGACGAAAAGAAGGGGCTTGTCTCGGCTCGGCTGCACCCGCTCGTGCT
CAACCCTACGCCGCGCCTCCATCCTATCCCCATGCCTGCCTCCCTTTGCCGGCCTTTGAT
TTGAGAGCCACGCTCAAGATGGTAACTCCATCTCATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATAACACACGCGACAGAGTTGCGAAATA
ATCGATCTAATAATTGTTCCATGATTTCAACTACCTCACTGTCAGGGGTCAGAACATAAA
AATCTTTCGCAAGTGTATTTCTCACAACTATGTGCTGCAACTCTCAGGTTATCGAATGGC
TTTATTCCATCGAAATTAATCTCACGTCCTTTTGGATCGGACAGATATGCAAATTTTAAT
TGTACTCTGATTTTTGTTTATTACCTACTAGTACGTACCATGCTCATCTTTGTTCATCGT
TTCGCATATACTCCCTTCGTCCCAAATTATAACTCATTCCAAGAATCTTGGAGAGTCAAA
GTTTTTCAAGTTTGACCAAATTTCTATAGCAAAATAATAATATTTTTTGTACCAACCAAG
TATCATTAGATTCTTTGTTAGTTATATTTTCATAGTGTACCTATTTTATGACGTAAATCT
TTATATTTTTCTCTATATTTTTGGTCAAACTTGAAAATGAGCTCTCCAAGATTCTTGGAA
TGACTTATAATTTGGAACGGAGGGGGTATTTTTTTTCTTTGTTAGAATGACGTATAGGTT
TTCTATCTACTCATGGTTAGTACTATTCCTCTTCTAATCTTGATTTGAGATTTTCTTTCC
CTCTCCCTTTTTCTCTAGATTGTCTCACCGCCGTCGTAGCCGAATATGAAGACGGTGCTG
ACTGCTGAGACGATCTGGAGACGGTTAGTACTATCTCAATCCAAAGACCGTTGTACACTA
ATTTCTCTCTCGAACGATATCTCTGTGATGTATCTCTCTTCCTCTCTCTTCACAAAAGCA
GATCCTATGTGTCATGGAGGCCTCAGCAATCAGCTAGCTGGAGCCTGTAGGCATGGGGGT
TGGTGGCGGTCGAAGAGAGAGAGGGAGGGGCTCATCAATGCCAGCGTTTGGAGAGGGAGA
GGCGCGGGTGGCCGGTGGTCCTTGTAGCCGAAGAACCCGCAGCCACCTACGCTCCTCCCC
ACCCATGCGTCGCTGTCAATGGAGGAAACTAGGGTGCTGTTGGCGGGGTTGAGGGTTTGG
ATGCCCAAATCCACCACTCCCCACGCTCGATGGCTCATGGGGCGACTGGATCTAGGGGCT
TCCCTCGCAACTAGGAGCTGATGCTGGAGGAGGAGGCCATCTTGTTTGGGCAGCGGAGGA
TGCCGTTAGTGCTTGGGTGGCACGGGCGCATGCGGACCGAGGGGGAATGTGGCGGCGGTA
GCGGCTGGCGGATAAGCTGGAGCATATGCGTGAGGGAGATGCCTATGGGTGAGGGGTATC
TGGTGTCTTTTTCCAATTGGTACAAAAGTCTCCAAAAGTCTGGCTAAAATTAGTAGCCAA
ATTCTATTGTTTAGTCATTTTCTAAAGTAGAAAACTTCTTAAAAATAAGAGATTCACAAC
AGCCTTGCTATTTTACAAAATCATATAGCTTGTG