Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU77260
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:1697730:1700246:-1 gene:SORBI_3009G018600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGTGCCGTATCTTGCTACTAGTTACCCTCATATGCCTCGCACTGTTATGCATCTTG
TCGATCACCATAGAGGCTGATAACAGCTCCATCGGCTCTGGCCAAATCCGACTAGCTTGT
GGAGCCTCCAAACCAACAGATGTTGGTCCTGATGGTCGAATATGGCATAGTGACATAGAT
TCCGAGTTTGCACCATCACTGGAAGGCTCTTCAATTGCTTTAGACCCTTTTACCACCACT
GTTGTTCCTTATATGACTGCTCGGATCTTCACTTCAAATTACACTTATTCATTCCCTGTT
AGTCCAGGACGCATGTTTGTGCGCCTCTACTTCCACTATCCTACCACTCATGGCATCTAT
GCTCCTTCAAATGCCTACTTTGGTGTCACAGCGAGCAATTTGGTCATTTTAGACAACTTC
TATGCTACCCAAACTTCTTTGACAGCTAAAGACAGCTTCTTTCGTGAATACTCCTTAAAT
GTTACTTCACGTAAACTACTACTCTCCTTCAGCCCATCTACCCACCATAATGGATCTTAT
GCATTTGTGAATGGGATTGAAATCGTGCCCACACCTGACCTTTTCACAACAACAATACCA
ACACTAGCCAATGGTGGAAACCCTGATCTATTCCCTATTGATCCTGCAACAGGGTTCCAA
ACAATGTACCGGCTTAATGTAGGGGGGCCAGACATCTCTCCACATGATGATATTGACTTT
TACCGTACATGGTACGAGGACGATCCTTACTTATATAATGATGCTCCTTCAGTTTGCCCT
GTGATGGACCACAATATTACTGTCACCTATATGCCCAGTGTACCAAACTACACTGCACCA
GTTGATGTCTATTTAACTGCTCGGTCAATGGGACAAGATCCACAAGTCAACCTGAAGTAT
AATCTTACATGGATTTTACCAATTGATGCTGGGTTCTATTACCTCCTAAGGCTCCATTTC
TGTGAGAACCAGTACCCGATAACTAAGGTTAACCAGAGGTCATTCTTTATCTACATCAAT
AACCAGACAGCACAGGAGGAAATGGATAAGGACCTGTGGGTTGCCCTTCACCCTGATCTT
TCGACGAGGCCAGAGTATTTTGATGCAATACTGAATGGTCTTGAGGTCTTTAAGCTACAT
AATTATCGAGATAACAGCCTTGCTGCACTCCAGTCACCCCTTCCACCACCACCATCACCA
CCTGATCAAGTGGAACCTAATAATGACAAGCCTGCAGGTGCAAGAAAAAGGAACTCGAAG
GGTGCTGTCCCAGCAGCCATAGCTGGAACTGTTGGTGTTTTTGCTCTTCTGTTGTTGACC
TGTTTTGGCAAGTACATCATTGGCAGATGGAAAGAGAGAGCAAGGAATTATAGAATAAGG
ACCGGCTTGACTCCTCAAGTTGAGGGCTACAATCTACCATCAGTTATGTGCCACCACTTC
ACCTTCAAGCAAATCCAGGCAGCCACTAATAACTTCGATGAAACTTTTCTCCTTGGCAAG
GGTGGTTTTGGGAATGTGTATCGTGGAAAGATAGATTGTGGTGTTCAGGTGGCGATCAAG
CGTGGCAATCCACTGTCCCAGCAGGGCCTACGTGAGTTCCGGAATGAGATTGGAATACTG
TCCATGCTTCGTCACCGCCACCTTGTATCTCTTATTGGATACTGTGAACAGAACAATGAG
ATGATCCTAGTTTATGATTACATGGCTCATGGTACCCTTCAGGAGCAACTCTACAGCACC
AACAGGTCACCTCTGCCCTGGAAGCAACGCCTTGAGATCTGCATCGGTGCAGCTCGAGGG
CTCCACTATCTGCACACTGGTGCCAACCAAGCAATCATCCATCGTGATGTTAAGACTGCC
AACATTCTCTTGGATGACAAGTTCGTGGCAAAGGTCGCAGACTTCGGGCTATCGAAGGGC
AGTCTAGACGTCGATGATACCCATGTAAGCACTGCGGTGAAGGGCACCTTTGGGTATCTC
GATCCTGAGTATTTCCGGAGCAAGCGACTCACCAGGAAATCTGATGTGTACGCGTTTGGG
GTCGTGCTGTTTGAGGTTCTGTGCGCGCGCCCTGTGATTAACATTCAGCTTCCTGAGGAG
CAAGTGAGCCTGCATGACTGGGCGCTGTCTTGCCAGAAGAATGGCATGCTCAGCGAGATC
ATTGACCCTCATCTCCAGGGGAAAATAACACCCGAGTGCTTCAGGAAATTCACAGAGACT
GCTGAGCAATGTGTTGCTCATCGTAGCATTGATCGGCCATCCATGGGCGATGTACTTTCG
AACCTCCAGGTCGCTCTCCAGCTGCAGGAGAGGACAGGTGTAAATAGCAGCAATGGTGAG
GCTCCATTGTCCCTTGCAGCAGGTCCATTAACAAATTCAACAATGAGCATTACAGGACAA
GGGATCGTTTTCTCAAATATCATACATACTGAAGGACGATGA

Peptide Sequence

PEP ID

OQU77260
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:1697730:1700246:-1 gene:SORBI_3009G018600 transcript:OQU77260 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVCRILLLVTLICLALLCILSITIEADNSSIGSGQIRLACGASKPTDVGPDGRIWHSDID
SEFAPSLEGSSIALDPFTTTVVPYMTARIFTSNYTYSFPVSPGRMFVRLYFHYPTTHGIY
APSNAYFGVTASNLVILDNFYATQTSLTAKDSFFREYSLNVTSRKLLLSFSPSTHHNGSY
AFVNGIEIVPTPDLFTTTIPTLANGGNPDLFPIDPATGFQTMYRLNVGGPDISPHDDIDF
YRTWYEDDPYLYNDAPSVCPVMDHNITVTYMPSVPNYTAPVDVYLTARSMGQDPQVNLKY
NLTWILPIDAGFYYLLRLHFCENQYPITKVNQRSFFIYINNQTAQEEMDKDLWVALHPDL
STRPEYFDAILNGLEVFKLHNYRDNSLAALQSPLPPPPSPPDQVEPNNDKPAGARKRNSK
GAVPAAIAGTVGVFALLLLTCFGKYIIGRWKERARNYRIRTGLTPQVEGYNLPSVMCHHF
TFKQIQAATNNFDETFLLGKGGFGNVYRGKIDCGVQVAIKRGNPLSQQGLREFRNEIGIL
SMLRHRHLVSLIGYCEQNNEMILVYDYMAHGTLQEQLYSTNRSPLPWKQRLEICIGAARG
LHYLHTGANQAIIHRDVKTANILLDDKFVAKVADFGLSKGSLDVDDTHVSTAVKGTFGYL
DPEYFRSKRLTRKSDVYAFGVVLFEVLCARPVINIQLPEEQVSLHDWALSCQKNGMLSEI
IDPHLQGKITPECFRKFTETAEQCVAHRSIDRPSMGDVLSNLQVALQLQERTGVNSSNGE
APLSLAAGPLTNSTMSITGQGIVFSNIIHTEGR

Transcript Sequence

Transcript ID

OQU77260
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:1697730:1700246:-1 gene:SORBI_3009G018600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGTGCCGTATCTTGCTACTAGTTACCCTCATATGCCTCGCACTGTTATGCATCTTG
TCGATCACCATAGAGGCTGATAACAGCTCCATCGGCTCTGGCCAAATCCGACTAGCTTGT
GGAGCCTCCAAACCAACAGATGTTGGTCCTGATGGTCGAATATGGCATAGTGACATAGAT
TCCGAGTTTGCACCATCACTGGAAGGCTCTTCAATTGCTTTAGACCCTTTTACCACCACT
GTTGTTCCTTATATGACTGCTCGGATCTTCACTTCAAATTACACTTATTCATTCCCTGTT
AGTCCAGGACGCATGTTTGTGCGCCTCTACTTCCACTATCCTACCACTCATGGCATCTAT
GCTCCTTCAAATGCCTACTTTGGTGTCACAGCGAGCAATTTGGTCATTTTAGACAACTTC
TATGCTACCCAAACTTCTTTGACAGCTAAAGACAGCTTCTTTCGTGAATACTCCTTAAAT
GTTACTTCACGTAAACTACTACTCTCCTTCAGCCCATCTACCCACCATAATGGATCTTAT
GCATTTGTGAATGGGATTGAAATCGTGCCCACACCTGACCTTTTCACAACAACAATACCA
ACACTAGCCAATGGTGGAAACCCTGATCTATTCCCTATTGATCCTGCAACAGGGTTCCAA
ACAATGTACCGGCTTAATGTAGGGGGGCCAGACATCTCTCCACATGATGATATTGACTTT
TACCGTACATGGTACGAGGACGATCCTTACTTATATAATGATGCTCCTTCAGTTTGCCCT
GTGATGGACCACAATATTACTGTCACCTATATGCCCAGTGTACCAAACTACACTGCACCA
GTTGATGTCTATTTAACTGCTCGGTCAATGGGACAAGATCCACAAGTCAACCTGAAGTAT
AATCTTACATGGATTTTACCAATTGATGCTGGGTTCTATTACCTCCTAAGGCTCCATTTC
TGTGAGAACCAGTACCCGATAACTAAGGTTAACCAGAGGTCATTCTTTATCTACATCAAT
AACCAGACAGCACAGGAGGAAATGGATAAGGACCTGTGGGTTGCCCTTCACCCTGATCTT
TCGACGAGGCCAGAGTATTTTGATGCAATACTGAATGGTCTTGAGGTCTTTAAGCTACAT
AATTATCGAGATAACAGCCTTGCTGCACTCCAGTCACCCCTTCCACCACCACCATCACCA
CCTGATCAAGTGGAACCTAATAATGACAAGCCTGCAGGTGCAAGAAAAAGGAACTCGAAG
GGTGCTGTCCCAGCAGCCATAGCTGGAACTGTTGGTGTTTTTGCTCTTCTGTTGTTGACC
TGTTTTGGCAAGTACATCATTGGCAGATGGAAAGAGAGAGCAAGGAATTATAGAATAAGG
ACCGGCTTGACTCCTCAAGTTGAGGGCTACAATCTACCATCAGTTATGTGCCACCACTTC
ACCTTCAAGCAAATCCAGGCAGCCACTAATAACTTCGATGAAACTTTTCTCCTTGGCAAG
GGTGGTTTTGGGAATGTGTATCGTGGAAAGATAGATTGTGGTGTTCAGGTGGCGATCAAG
CGTGGCAATCCACTGTCCCAGCAGGGCCTACGTGAGTTCCGGAATGAGATTGGAATACTG
TCCATGCTTCGTCACCGCCACCTTGTATCTCTTATTGGATACTGTGAACAGAACAATGAG
ATGATCCTAGTTTATGATTACATGGCTCATGGTACCCTTCAGGAGCAACTCTACAGCACC
AACAGGTCACCTCTGCCCTGGAAGCAACGCCTTGAGATCTGCATCGGTGCAGCTCGAGGG
CTCCACTATCTGCACACTGGTGCCAACCAAGCAATCATCCATCGTGATGTTAAGACTGCC
AACATTCTCTTGGATGACAAGTTCGTGGCAAAGGTCGCAGACTTCGGGCTATCGAAGGGC
AGTCTAGACGTCGATGATACCCATGTAAGCACTGCGGTGAAGGGCACCTTTGGGTATCTC
GATCCTGAGTATTTCCGGAGCAAGCGACTCACCAGGAAATCTGATGTGTACGCGTTTGGG
GTCGTGCTGTTTGAGGTTCTGTGCGCGCGCCCTGTGATTAACATTCAGCTTCCTGAGGAG
CAAGTGAGCCTGCATGACTGGGCGCTGTCTTGCCAGAAGAATGGCATGCTCAGCGAGATC
ATTGACCCTCATCTCCAGGGGAAAATAACACCCGAGTGCTTCAGGAAATTCACAGAGACT
GCTGAGCAATGTGTTGCTCATCGTAGCATTGATCGGCCATCCATGGGCGATGTACTTTCG
AACCTCCAGGTCGCTCTCCAGCTGCAGGAGAGGACAGGTGTAAATAGCAGCAATGGTGAG
GCTCCATTGTCCCTTGCAGCAGGTCCATTAACAAATTCAACAATGAGCATTACAGGACAA
GGGATCGTTTTCTCAAATATCATACATACTGAAGGACGATGA