Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76955
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:58341359:58345359:-1 gene:SORBI_3010G242200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAACGGTACAGATCGCAGCTCGAGCAGGAAGTTAAGAAATTGCAAAGGCAACTCCAA
GAAGAGATTGATTTGCATCTGGCGTTGGCAGATGCCATAACATATAATGCGGCGCTGATA
CTTAAGTCATCTATAAAGCTTCCAGACAAGGCACATGAGCTATTAATTAGCATATCCTCT
TTGGAAATCGCTATCACAAAGCTTGAGGAGGACCTAAATCACCTGCATTATCAGTTATGT
CATGCAAGGAATGAAAGGCTACTTGCAGAAAATAAGCCAGGATGCTTGCTACCTACAGCA
TCAGCTTGTCAACCCTCCACAGCTTCCAATTGTACAGGGGAAGAGCCCGGACAAGTGTTA
AGAGATTTGAGATTCAGAGTTTATCACCCAGTGGAAGAAGATTTTTCAACTGAACCTGAA
GATCAACAGAATGACGAAAAAGCCACTGAAGATGGAGAACGGGTGTCTCTAAATATGCTG
CTAGAAAAGCACCAAGATGTTTCTTTAACTGGACTGTTGGAACACCAAGATGAAGAGATG
CAAGAGGCATGCTCTATGGAAAAAGAAGGCAAAGAAGATCAGAAGATAGATGTGTTACCA
TTTAGCCAGCCCAATTTGAAGAGAAGCAACATGAGTGGAAATTTGTGGAATAATCCAAAT
CAGCTCTCTGAAGAGATGGTGCGCTCCATGAAAGATATCTTCCTTCATTTATCTACATCT
TCCAAGATATCACCAGAGGAGCCTTTTGCTAATTCATCTTCATCAGCAGAACGTCTGTCT
GGTTCAACATTGACTACTTTATCAGATTCATCTGTAATAGCCTCAGTGCTGCTCAGTCCT
TCAATTGACTTGAACCATGATGATGGTATTGTTGATGATGTTAGAAACTTTGACCCATAC
AATGTTAATGGGAAGGAAGCACGGAGAGACATTGGAAGCTATTGTTCAGTAGCTGAAGTG
TCTTGGATGTATATTGGCAATGAACAACTTGAATATGCATCTGGAGCTCTGAAAAAGTTC
AGATTTCTTGTGGAGCAACTATCAAAGGTTGACCCTTTTTGTATGAACTGTGATGAACGG
TTAGCATTTTGGATTAACCTGTACAATGCATTAATAATGCATGCTTATTTGGCATACGGT
GTCCCTGAAAATGACATTAAGCTTTTCGCACTAATGCAAAAGGCCTGTTACACGATCGGT
GGGCAGCCTGTCAGTGCAGCTGAAATAGAGTTTGTGATTCTGAAGATGAAGACTCCAGTG
CACCGGCCACAACTCTCCTTGATGCTGGCCCTTCACAAATTTAAAACATCAGAGAATCTC
AAGAAATATTCAATCGATGACCCTGAGCCTCGTGTGCTCTTTGCCCTCTGTTGTGGGATG
TTCTCTTCACCTGCGGTAAGGATTTTCTCTGCTGAAAATGTTCGAGACGAGCTTCAAGAA
TCAATGAGAGACTACATCCGAGCATCAGTTGGTATCAATGACAAGGGAGAGCTTATAGTC
CCCAAGTTACTGCAGAGCTATGCCAAGGGCATTGTGGAGGACTCTCTGCTTGCCGACTGG
ATCTGCCGTCATCTAACGCTAGATCAAGTCACTGCAATCCAAGATACGTCATCGTCGCAT
AAGCAGCGCCTTCTTGGAGTGCGCAGTTTCAGCGTCATCCCATTCGATTCAAGATTCCGG
TACCTATTCTTGTCCGAAAACAGTAGGTGCCAGAACTGA

Peptide Sequence

PEP ID

OQU76955
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:58341359:58345359:-1 gene:SORBI_3010G242200 transcript:OQU76955 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQRYRSQLEQEVKKLQRQLQEEIDLHLALADAITYNAALILKSSIKLPDKAHELLISISS
LEIAITKLEEDLNHLHYQLCHARNERLLAENKPGCLLPTASACQPSTASNCTGEEPGQVL
RDLRFRVYHPVEEDFSTEPEDQQNDEKATEDGERVSLNMLLEKHQDVSLTGLLEHQDEEM
QEACSMEKEGKEDQKIDVLPFSQPNLKRSNMSGNLWNNPNQLSEEMVRSMKDIFLHLSTS
SKISPEEPFANSSSSAERLSGSTLTTLSDSSVIASVLLSPSIDLNHDDGIVDDVRNFDPY
NVNGKEARRDIGSYCSVAEVSWMYIGNEQLEYASGALKKFRFLVEQLSKVDPFCMNCDER
LAFWINLYNALIMHAYLAYGVPENDIKLFALMQKACYTIGGQPVSAAEIEFVILKMKTPV
HRPQLSLMLALHKFKTSENLKKYSIDDPEPRVLFALCCGMFSSPAVRIFSAENVRDELQE
SMRDYIRASVGINDKGELIVPKLLQSYAKGIVEDSLLADWICRHLTLDQVTAIQDTSSSH
KQRLLGVRSFSVIPFDSRFRYLFLSENSRCQN

Transcript Sequence

Transcript ID

OQU76955
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:58341359:58345359:-1 gene:SORBI_3010G242200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATGTGAAAAATTTTGCAAAATTTTCTGGGAAGTAAACAAGGCCTCAGGTGATCTGTGAA
ATCTATTCCGTGTTCGAGAGTGGGCCCTCGCCTCTATTCATGCAGGTACTGATCTGGTGT
TTGTGTTTTTCTTTGTAGGATGATAGCAGCATTGGTAGTGCCAAGAGGGAAGGGGCACGA
AGGTGCATCATGCAACGGTACAGATCGCAGCTCGAGCAGGAAGTTAAGAAATTGCAAAGG
CAACTCCAAGAAGAGATTGATTTGCATCTGGCGTTGGCAGATGCCATAACATATAATGCG
GCGCTGATACTTAAGTCATCTATAAAGCTTCCAGACAAGGCACATGAGCTATTAATTAGC
ATATCCTCTTTGGAAATCGCTATCACAAAGCTTGAGGAGGACCTAAATCACCTGCATTAT
CAGTTATGTCATGCAAGGAATGAAAGGCTACTTGCAGAAAATAAGCCAGGATGCTTGCTA
CCTACAGCATCAGCTTGTCAACCCTCCACAGCTTCCAATTGTACAGGGGAAGAGCCCGGA
CAAGTGTTAAGAGATTTGAGATTCAGAGTTTATCACCCAGTGGAAGAAGATTTTTCAACT
GAACCTGAAGATCAACAGAATGACGAAAAAGCCACTGAAGATGGAGAACGGGTGTCTCTA
AATATGCTGCTAGAAAAGCACCAAGATGTTTCTTTAACTGGACTGTTGGAACACCAAGAT
GAAGAGATGCAAGAGGCATGCTCTATGGAAAAAGAAGGCAAAGAAGATCAGAAGATAGAT
GTGTTACCATTTAGCCAGCCCAATTTGAAGAGAAGCAACATGAGTGGAAATTTGTGGAAT
AATCCAAATCAGCTCTCTGAAGAGATGGTGCGCTCCATGAAAGATATCTTCCTTCATTTA
TCTACATCTTCCAAGATATCACCAGAGGAGCCTTTTGCTAATTCATCTTCATCAGCAGAA
CGTCTGTCTGGTTCAACATTGACTACTTTATCAGATTCATCTGTAATAGCCTCAGTGCTG
CTCAGTCCTTCAATTGACTTGAACCATGATGATGGTATTGTTGATGATGTTAGAAACTTT
GACCCATACAATGTTAATGGGAAGGAAGCACGGAGAGACATTGGAAGCTATTGTTCAGTA
GCTGAAGTGTCTTGGATGTATATTGGCAATGAACAACTTGAATATGCATCTGGAGCTCTG
AAAAAGTTCAGATTTCTTGTGGAGCAACTATCAAAGGTTGACCCTTTTTGTATGAACTGT
GATGAACGGTTAGCATTTTGGATTAACCTGTACAATGCATTAATAATGCATGCTTATTTG
GCATACGGTGTCCCTGAAAATGACATTAAGCTTTTCGCACTAATGCAAAAGGCCTGTTAC
ACGATCGGTGGGCAGCCTGTCAGTGCAGCTGAAATAGAGTTTGTGATTCTGAAGATGAAG
ACTCCAGTGCACCGGCCACAACTCTCCTTGATGCTGGCCCTTCACAAATTTAAAACATCA
GAGAATCTCAAGAAATATTCAATCGATGACCCTGAGCCTCGTGTGCTCTTTGCCCTCTGT
TGTGGGATGTTCTCTTCACCTGCGGTAAGGATTTTCTCTGCTGAAAATGTTCGAGACGAG
CTTCAAGAATCAATGAGAGACTACATCCGAGCATCAGTTGGTATCAATGACAAGGGAGAG
CTTATAGTCCCCAAGTTACTGCAGAGCTATGCCAAGGGCATTGTGGAGGACTCTCTGCTT
GCCGACTGGATCTGCCGTCATCTAACGCTAGATCAAGTCACTGCAATCCAAGATACGTCA
TCGTCGCATAAGCAGCGCCTTCTTGGAGTGCGCAGTTTCAGCGTCATCCCATTCGATTCA
AGATTCCGGTACCTATTCTTGTCCGAAAACAGTAGGTGCCAGAACTGAAACAAGCTGCAT
TGATCTATGTGCAGAAAGCCACAAGAGTGGGCGTTTGACATAGTGAAAAATGAAAAAAGT
TAGCCGTGTTGTACATTTTGTAAATTTTGGTGGTGATTAGGATTCTTCTCTGTATGTAAA
ATTCAGTTAACTTTTGTACATCAAGCAAACCCGAAATATAAACTGTAGATTGGTCGATGG
TTCAGTTTCAGGTTAGTGGCTTAATTACTGACAAGCAAGTGAAACAACCCAAAATTTACT
GCAAATTCACAGCCAGCAAACTGAACTATGGCTGCTACTGAACTTTACAAGGCAATCGAG
CGCGCATTCATTTCTGAATAGGCTCGATGTCGATGAGGAGGCCCTGAGACGGGTATGGCA
ACGGGAACCTGGAGAAGCTGCGGTCGCAGCCGGCGGCGAGCTTCCACCTGAAGCGCGTTA
CGATGTGGTGCATGGCCACCAGCGTCTCGACCCTGGCGAACTCGTTCCCGGGGCAGACAC
GCGCGCCGCCACCGAACGGCACGAAGGCGAAGGGCGGCACAGCCGACGCGTTCTCGAACC
GAGCCGGGTCGAACCTGCCGGGCTCCGGGAAGATGGCCGGGTCCCACTGCGTCATGTTGG
CCGCGTGGATCACCTGCCAGCCCTTTGGTATGAGGTAGCCGCCGTACTCGACGTCGTCCA
CCGTCTTCCTCATCATGGTGAACACTGGAGGCACCATCCGCAGCGTCTCCAGCGCCGCCG
CCCAGGTGTACCGCATCCTGCCGAGGTCCTCCCATGTC