Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76825
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:56090147:56094718:-1 gene:SORBI_3010G218000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACAATGCCGGGCTCTTCGGCGAGGCCGAGCTTCTCGGCCTTCCGCGGTGCCCGGTGG
CGCGCCGATCTCGGCGTCATCCCCGGCTCCGCCGCCGTCTCCACCGACGATCTCCGCCGC
GCCGCCGCCGACTCCCGCCGGAGATATGCTAATCTGCGGCGAAGGCTGCTAATAGATCCC
CATCTTTCCAAGGATGAAGAAGGTGCCCCTGACTTGATTGTGGAGAATCCACTATCGCAG
AGCCCAGGGAGCACTTGGGGCCAATATTTCAGGAATGCAGAGCTTGAGAAAATGCTTAAC
CAAGATCTGTCCCGCCTATACCCTGAATTGGGGGACTTCTTCCAAACAAGCACATGTCAG
TCTATGCTTGGACGTGTATTGTTAGTATGGAGCCTCAGATACCCAGAGTTTGGTTACAGA
CAAGGAATGCATGAACTCTTAGCTCCTCTTCTCTATGTACTTCACGCTGATGTGCAGCAC
TTCAGACAAGTCAGGGACCTTCATGAAGAGCTTTTGGGTGATGATTTTGATGGCCAAACT
TTTCCAGATCGTTCAAAGCTGAACAGAAGTGACAGAAAAAACAATGTTGAGGGTAGAACA
GCTAAATTTAGAAGTTTGTCTGACCTTGATCCTGATACTAGAGATCTTTTCTTGATCAAT
GATGCATATGGAGCAGAGGGTGAGTTGGGTATTATTTTATCAGAAAAGTTTATGGAGCAT
GATGCTTACTCTATGTTTGAGAATTTGATGAACGGTGCGCAAGGAGTGGTTGCTATCACT
GACTTCTATTCTCTGAGTCCTGCCCCAGAATCAAGCACGGGTTTAACACCTGTAAGAGAG
GCATCATCTGCAATATATCACTTGCTTGCTAGTGTTGATTCCTCTCTTCATAGTCACCTT
GTGGAGTTAGGAGTTGAACCTCAGTACTTTGCATTACGATGGCTCCGCGTCCTATTTGGT
CGTGAGTTTTCACTTGACAGTCTTCTGTTTATTTGGGATGAGATCTTATCTTCTCCTAAC
CATTCTTATTGTACTGAAATCATGAGTAGGGCTGATTATCAGTTTAAAGTGTTATGTTCT
CCCCGTGGTGCGCTGATTTTATCGATGGCAGTATCAATGATGCTTCATCTCAGATCCTCC
TTGTTAGGTAGTGAACATGCGACTTCTTGCCTAGTGAGGTTGTTAAATTTTCCAGAAGAT
ATTGACTTAAATAACTTAATTGAGAAAGCCAAGTTACTGCAATCTTTTGCCCTTGAAGCA
AATCTTCCTTCATCTCCAATGAGAGGAAATTCCCTCTTGACTACACCCAACTATTGGGAA
GAGACATGGAAGATTCTCCAGCCATCAATGGACCAAAAGGGTGGTGGTGTCTTCAAGATG
AAGGGAAGGGGCTTCTTGAGAAGAAGCTTGTCTAACACTGAGTCGAATGTTTCCAGAAGC
AAGGCTGCTAATTTTGAAAACAAAGATATGACTTCAACTACGCAGTCCACTACTGATGAA
CTTCACAATGCTGATGTAGTTCCTGCAGAGCTGATAAATAGTGTGCCACACATGCTTATA
GAAAAACAAAAGCATCATGTTGGTAAAGGTACTGCAGAGGCTATTGGGAGTAATTCAAAG
AATGCATGTGAGACAGGCCAGCATGATGGTTACTGCTCAACTTCAGGTGAAATTAGAGAT
CCTCTTGGAGCAGCTAGTGGGTATTTATCGAGGAGCAGCAGTACCACTTTGTCATGTGGA
ACTGAATACGATCATGATACCCATCATCTGGAAGAAACATGTGGTCCCTGTGATGACAGA
GTGGTTAATGAACCTGATCCACTCTTTGTGCACGATGGTAGAACTGATGAAGCAGCAACA
ACAGATCGAACATCTGGAATAGTGGATACTTATCCAGTTCAAGAGTGTAGACTGTGTTCT
GCTGATGGGAAGCTGAAAATAAAAGATGACCAAAATTCCACTAGTGATAAAGGTGGCCAA
AAAGAAACATTGGCAATATGTTCAATAACAAATGTGGCTGATAAAGAGTTGAGCAGAACA
TTAAGATCTCTTGGTGAATCTATGGTTGAGAACATACAGGATATCGAGATGCTGTTTCAA
CCAAATTCACTCTCGACTTCAGTGGAGAAACTTGAGAAAGCAATTCCTAGAAGCACAGAG
CAAGCTAAGGCAGTAGCAGCTCTAAAAGAACTCAGGAAGATCAGTGACCTTTTACGTCAA
ATCTAA

Peptide Sequence

PEP ID

OQU76825
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:56090147:56094718:-1 gene:SORBI_3010G218000 transcript:OQU76825 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTMPGSSARPSFSAFRGARWRADLGVIPGSAAVSTDDLRRAAADSRRRYANLRRRLLIDP
HLSKDEEGAPDLIVENPLSQSPGSTWGQYFRNAELEKMLNQDLSRLYPELGDFFQTSTCQ
SMLGRVLLVWSLRYPEFGYRQGMHELLAPLLYVLHADVQHFRQVRDLHEELLGDDFDGQT
FPDRSKLNRSDRKNNVEGRTAKFRSLSDLDPDTRDLFLINDAYGAEGELGIILSEKFMEH
DAYSMFENLMNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIYHLLASVDSSLHSHL
VELGVEPQYFALRWLRVLFGREFSLDSLLFIWDEILSSPNHSYCTEIMSRADYQFKVLCS
PRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPEDIDLNNLIEKAKLLQSFALEA
NLPSSPMRGNSLLTTPNYWEETWKILQPSMDQKGGGVFKMKGRGFLRRSLSNTESNVSRS
KAANFENKDMTSTTQSTTDELHNADVVPAELINSVPHMLIEKQKHHVGKGTAEAIGSNSK
NACETGQHDGYCSTSGEIRDPLGAASGYLSRSSSTTLSCGTEYDHDTHHLEETCGPCDDR
VVNEPDPLFVHDGRTDEAATTDRTSGIVDTYPVQECRLCSADGKLKIKDDQNSTSDKGGQ
KETLAICSITNVADKELSRTLRSLGESMVENIQDIEMLFQPNSLSTSVEKLEKAIPRSTE
QAKAVAALKELRKISDLLRQI

Transcript Sequence

Transcript ID

OQU76825
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:56090147:56094718:-1 gene:SORBI_3010G218000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCCTCCCTCGCTTTCCCCCACACCCCAACCCCACCCTTCCGTCCTCCCCCTTTCCCACGC
CAAGAAACCACGCTGCGACCGCCCTCCTCATCGTCCTCGATCCCAATCCCTCCTCGTCAC
GATCGCAAACCGACATCGACCCGTCCAGTCGGCTCCGCATCGCCAGCCTGCAACTCACTC
CTTCGGTGGGCGTGTCTGGTTCGTGCTCCCGCAGCGGAGGCTGGAGCCGAGATGACAATG
CCGGGCTCTTCGGCGAGGCCGAGCTTCTCGGCCTTCCGCGGTGCCCGGTGGCGCGCCGAT
CTCGGCGTCATCCCCGGCTCCGCCGCCGTCTCCACCGACGATCTCCGCCGCGCCGCCGCC
GACTCCCGCCGGAGATATGCTAATCTGCGGCGAAGGCTGCTAATAGATCCCCATCTTTCC
AAGGATGAAGAAGGTGCCCCTGACTTGATTGTGGAGAATCCACTATCGCAGAGCCCAGGG
AGCACTTGGGGCCAATATTTCAGGAATGCAGAGCTTGAGAAAATGCTTAACCAAGATCTG
TCCCGCCTATACCCTGAATTGGGGGACTTCTTCCAAACAAGCACATGTCAGTCTATGCTT
GGACGTGTATTGTTAGTATGGAGCCTCAGATACCCAGAGTTTGGTTACAGACAAGGAATG
CATGAACTCTTAGCTCCTCTTCTCTATGTACTTCACGCTGATGTGCAGCACTTCAGACAA
GTCAGGGACCTTCATGAAGAGCTTTTGGGTGATGATTTTGATGGCCAAACTTTTCCAGAT
CGTTCAAAGCTGAACAGAAGTGACAGAAAAAACAATGTTGAGGGTAGAACAGCTAAATTT
AGAAGTTTGTCTGACCTTGATCCTGATACTAGAGATCTTTTCTTGATCAATGATGCATAT
GGAGCAGAGGGTGAGTTGGGTATTATTTTATCAGAAAAGTTTATGGAGCATGATGCTTAC
TCTATGTTTGAGAATTTGATGAACGGTGCGCAAGGAGTGGTTGCTATCACTGACTTCTAT
TCTCTGAGTCCTGCCCCAGAATCAAGCACGGGTTTAACACCTGTAAGAGAGGCATCATCT
GCAATATATCACTTGCTTGCTAGTGTTGATTCCTCTCTTCATAGTCACCTTGTGGAGTTA
GGAGTTGAACCTCAGTACTTTGCATTACGATGGCTCCGCGTCCTATTTGGTCGTGAGTTT
TCACTTGACAGTCTTCTGTTTATTTGGGATGAGATCTTATCTTCTCCTAACCATTCTTAT
TGTACTGAAATCATGAGTAGGGCTGATTATCAGTTTAAAGTGTTATGTTCTCCCCGTGGT
GCGCTGATTTTATCGATGGCAGTATCAATGATGCTTCATCTCAGATCCTCCTTGTTAGGT
AGTGAACATGCGACTTCTTGCCTAGTGAGGTTGTTAAATTTTCCAGAAGATATTGACTTA
AATAACTTAATTGAGAAAGCCAAGTTACTGCAATCTTTTGCCCTTGAAGCAAATCTTCCT
TCATCTCCAATGAGAGGAAATTCCCTCTTGACTACACCCAACTATTGGGAAGAGACATGG
AAGATTCTCCAGCCATCAATGGACCAAAAGGGTGGTGGTGTCTTCAAGATGAAGGGAAGG
GGCTTCTTGAGAAGAAGCTTGTCTAACACTGAGTCGAATGTTTCCAGAAGCAAGGCTGCT
AATTTTGAAAACAAAGATATGACTTCAACTACGCAGTCCACTACTGATGAACTTCACAAT
GCTGATGTAGTTCCTGCAGAGCTGATAAATAGTGTGCCACACATGCTTATAGAAAAACAA
AAGCATCATGTTGGTAAAGGTACTGCAGAGGCTATTGGGAGTAATTCAAAGAATGCATGT
GAGACAGGCCAGCATGATGGTTACTGCTCAACTTCAGGTGAAATTAGAGATCCTCTTGGA
GCAGCTAGTGGGTATTTATCGAGGAGCAGCAGTACCACTTTGTCATGTGGAACTGAATAC
GATCATGATACCCATCATCTGGAAGAAACATGTGGTCCCTGTGATGACAGAGTGGTTAAT
GAACCTGATCCACTCTTTGTGCACGATGGTAGAACTGATGAAGCAGCAACAACAGATCGA
ACATCTGGAATAGTGGATACTTATCCAGTTCAAGAGTGTAGACTGTGTTCTGCTGATGGG
AAGCTGAAAATAAAAGATGACCAAAATTCCACTAGTGATAAAGGTGGCCAAAAAGAAACA
TTGGCAATATGTTCAATAACAAATGTGGCTGATAAAGAGTTGAGCAGAACATTAAGATCT
CTTGGTGAATCTATGGTTGAGAACATACAGGATATCGAGATGCTGTTTCAACCAAATTCA
CTCTCGACTTCAGTGGAGAAACTTGAGAAAGCAATTCCTAGAAGCACAGAGCAAGCTAAG
GCAGTAGCAGCTCTAAAAGAACTCAGGAAGATCAGTGACCTTTTACGTCAAATCTAACCA
GTACAGCTATAATTTCTTCCATACATACGGTGTTGAAGTTTTTTATACGAATCTCCATTG
GACAATGGTTTTGATGTAACATGCTAACAGTATATAGCCATCTGATTGATCGGTAAATAG
TAATTTGTACATGCCCCCTGTAAGCTGATAAATTGAACTGTACATCTGAAACAGCTGCCT
GCTGGTTGTGAAGTGAAGGTGGCATACATTTTTTTGGCTTGTGACCCAACAATAAATCTG
CAAGGTTTC