Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76788
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:55222167:55229328:1 gene:SORBI_3010G209000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCCTCGCGGAGGCGCCGTCGCCGTCCCCGTCGTCGTCGAGCGGGAGCGACGACTTC
GCGGCGCTCCTCGACTCCGAGCTCGAGCTCGCCTCCGGCGCCGACTCGGCCTTCCCTGGC
GACCCCTCCTCCGCTTTCCCCGCCGCCACCGACGACGAGGACGAGGATGAGGACGAGGAT
GAGGATCCGGAGGTTGAAGCCGTAGAGCAAAACGGTACCAAAAGGCGTAGAGTGGAGGAA
CAGCTCCAAGATCAAGGAACATCAGTTAGGCCTGACAAAATTCCCACTGGTGCATCTAAA
AATGTTCAGGTCGAGGCATGTCCACATCCTGGATATTTTGGTGGACTTTGCTTTAGATGT
GGCAAGCCACAAGACGAGGAAAATGTTTCAGGAGTTGCTTTTGGTTACATCCACAAGGGC
TTGAGGCTAGGTACCTCAGAAATTGACAGACTACGTGGTGCTGATTTGAAGAATCTGTTG
CGTGAAAGAAAATTAGTACTCATTTTGGACTTGGATCACACACTGATCAACTCGACCAAA
CTCCAAGATATTTCTTCTGCTGAAAAAGATTTGGGTATTCAGACTGCTGCTTCAAAAGAT
GATCCAAACAGAAGCATCTTTTCACTAGATTCAATGCAGATGCTCACAAAGTTGAGACCA
TTTGTCCGAGAATTTCTGAAAGAAGCAAGCAATATGTTTGAGATGTATATATACACCATG
GGTGACAAAGCCTATGCAATTGAAATTGCGAAGCTTCTTGACCCTAGTAACATCTATTTT
CCTTCGAAAGTGATTTCAAACTCAGATTGCACTCAGCGACACCAGAAAGGTCTTGATGTG
ATTCTTGGAGCTGAAAGTGTTGCAGTGATTCTTGATGACACTGAGTATGTATGGCAGAAG
CATAAAGAGAACCTGATTCTGATGGAGAGATATCATTTCTTTGCTTCAAGCTGCCGACAA
TTTGGTTTTGGTGTTAGATCTTTGTCAGAGTCGATGCAAGATGAAAGGGAGAGTGATGGT
GCTTTGGCTACTGTTTTAGATGTCTTGAAGCGCATACACTCGATTTTCTTTGACTTGGCT
GTTGAAACTGATCTTTCTTCACAGGATGTAAGACAGGTGATCAAGGCGGTACGGAAGGAA
ATACTGCAAGGTTGCAAAATAGTCTTCAGTCGGGTGTTCCCAAACAATACTCGCCCACAG
GAGCAGATGCTCTGGAAGATGGCCGAGCATCTGGGTGCTGTTTGCTCTACAGATGTGGAT
TCCAGTGTCACCCATGTTGTAACTGTGGATCTGGGAACAGAGAAGGCTCGCTGGGGTGTT
GCCAACAAGAAGTTCTTGGTCCACCCACGCTGGATTGAAGCAGCAAATTTCCGGTGGCAT
AGGCAGCCGGAGGAAGATTTTCCTGTCACTGCCCCGAAGGAAAAGAGCAGAGATATAGAT
AATGCTGTGGCTGGCAAGAAGGAAACCAGCAAGGATAAAGAGAAGGAAACGATGAAGGGC
AAGGAAGAAAATGCTGCAGCTGGCCAGAAGGAAACGATGAAGGACAAGGAAGAAAATACT
GTGGCTGACCAGAAGGAAACGGGGAACGATGAAACAAATGTAGCCGGTCAGGAGAAAGAT
GGTGCCAAAGAAAATGCTGTGGCCACATCTACTACAGGTTTGGTAAGGGGGATGGAAATT
CAGCTTTTGTTATTATCCGTTCGTGCTGGCCCAGGATTTTAG

Peptide Sequence

PEP ID

OQU76788
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:55222167:55229328:1 gene:SORBI_3010G209000 transcript:OQU76788 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLAEAPSPSPSSSSGSDDFAALLDSELELASGADSAFPGDPSSAFPAATDDEDEDEDED
EDPEVEAVEQNGTKRRRVEEQLQDQGTSVRPDKIPTGASKNVQVEACPHPGYFGGLCFRC
GKPQDEENVSGVAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTK
LQDISSAEKDLGIQTAASKDDPNRSIFSLDSMQMLTKLRPFVREFLKEASNMFEMYIYTM
GDKAYAIEIAKLLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQK
HKENLILMERYHFFASSCRQFGFGVRSLSESMQDERESDGALATVLDVLKRIHSIFFDLA
VETDLSSQDVRQVIKAVRKEILQGCKIVFSRVFPNNTRPQEQMLWKMAEHLGAVCSTDVD
SSVTHVVTVDLGTEKARWGVANKKFLVHPRWIEAANFRWHRQPEEDFPVTAPKEKSRDID
NAVAGKKETSKDKEKETMKGKEENAAAGQKETMKDKEENTVADQKETGNDETNVAGQEKD
GAKENAVATSTTGLVRGMEIQLLLLSVRAGPGF

Transcript Sequence

Transcript ID

OQU76788
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:55222167:55229328:1 gene:SORBI_3010G209000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCCTTCTGCCTGCCCTCGGCGCCGCGCGGCCGCGCCCCATGAGCCTCGCGGAGGCGCCG
TCGCCGTCCCCGTCGTCGTCGAGCGGGAGCGACGACTTCGCGGCGCTCCTCGACTCCGAG
CTCGAGCTCGCCTCCGGCGCCGACTCGGCCTTCCCTGGCGACCCCTCCTCCGCTTTCCCC
GCCGCCACCGACGACGAGGACGAGGATGAGGACGAGGATGAGGATCCGGAGGTTGAAGCC
GTAGAGCAAAACGGTACCAAAAGGCGTAGAGTGGAGGAACAGCTCCAAGATCAAGGAACA
TCAGTTAGGCCTGACAAAATTCCCACTGGTGCATCTAAAAATGTTCAGGTCGAGGCATGT
CCACATCCTGGATATTTTGGTGGACTTTGCTTTAGATGTGGCAAGCCACAAGACGAGGAA
AATGTTTCAGGAGTTGCTTTTGGTTACATCCACAAGGGCTTGAGGCTAGGTACCTCAGAA
ATTGACAGACTACGTGGTGCTGATTTGAAGAATCTGTTGCGTGAAAGAAAATTAGTACTC
ATTTTGGACTTGGATCACACACTGATCAACTCGACCAAACTCCAAGATATTTCTTCTGCT
GAAAAAGATTTGGGTATTCAGACTGCTGCTTCAAAAGATGATCCAAACAGAAGCATCTTT
TCACTAGATTCAATGCAGATGCTCACAAAGTTGAGACCATTTGTCCGAGAATTTCTGAAA
GAAGCAAGCAATATGTTTGAGATGTATATATACACCATGGGTGACAAAGCCTATGCAATT
GAAATTGCGAAGCTTCTTGACCCTAGTAACATCTATTTTCCTTCGAAAGTGATTTCAAAC
TCAGATTGCACTCAGCGACACCAGAAAGGTCTTGATGTGATTCTTGGAGCTGAAAGTGTT
GCAGTGATTCTTGATGACACTGAGTATGTATGGCAGAAGCATAAAGAGAACCTGATTCTG
ATGGAGAGATATCATTTCTTTGCTTCAAGCTGCCGACAATTTGGTTTTGGTGTTAGATCT
TTGTCAGAGTCGATGCAAGATGAAAGGGAGAGTGATGGTGCTTTGGCTACTGTTTTAGAT
GTCTTGAAGCGCATACACTCGATTTTCTTTGACTTGGCTGTTGAAACTGATCTTTCTTCA
CAGGATGTAAGACAGGTGATCAAGGCGGTACGGAAGGAAATACTGCAAGGTTGCAAAATA
GTCTTCAGTCGGGTGTTCCCAAACAATACTCGCCCACAGGAGCAGATGCTCTGGAAGATG
GCCGAGCATCTGGGTGCTGTTTGCTCTACAGATGTGGATTCCAGTGTCACCCATGTTGTA
ACTGTGGATCTGGGAACAGAGAAGGCTCGCTGGGGTGTTGCCAACAAGAAGTTCTTGGTC
CACCCACGCTGGATTGAAGCAGCAAATTTCCGGTGGCATAGGCAGCCGGAGGAAGATTTT
CCTGTCACTGCCCCGAAGGAAAAGAGCAGAGATATAGATAATGCTGTGGCTGGCAAGAAG
GAAACCAGCAAGGATAAAGAGAAGGAAACGATGAAGGGCAAGGAAGAAAATGCTGCAGCT
GGCCAGAAGGAAACGATGAAGGACAAGGAAGAAAATACTGTGGCTGACCAGAAGGAAACG
GGGAACGATGAAACAAATGTAGCCGGTCAGGAGAAAGATGGTGCCAAAGAAAATGCTGTG
GCCACATCTACTACAGGTTTGGTAAGGGGGATGGAAATTCAGCTTTTGTTATTATCCGTT
CGTGCTGGCCCAGGATTTTAGATCTGGTCCATTGCAATTTTTGCTGCTGACCTGAAGCTG
ATTGGGCCTCCGCCCCTATAACTTTTACACAACGATGGAACTATAGGAGTTTAAGCAAAT
TGATGTTATGGCACAATTCTAGTTGAAATCCATGCGACTATGCGCAGATATATGACTGAT
CCCTAGTGGAACTATGGATTCTTTAGTTGAAAATGGTCCACGCTTTGTTAAATCTTGTGC
GCTGGAAAAAGGTATAGCTGTACAGTA