Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76647
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:51743898:51745889:-1 gene:SORBI_3010G179400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGGCCGGGCCTCCGCCGCACGTTGCCATGCTAGCGACGCCGGGGATGGGTCACCTG
ATCCCGCTGGCGGAGCTGGCGAAGCGCCTGGCGTCGCGGCACGGCGCGACGGCGACGCTC
ATCACCTTCGCGTCCACGGCGTCGGCAACGCAGCGCGCGCTCCTGGCCTCGCTGCCGCCC
GCGGTGTCGTCGCTCTCCCTCCCGCCCGTCGACCTCTCCGACCTGCCACGGGGCGCCGCC
ATCGAGACGCGCATGTCCGAGGAGTGCGCGCGGTCGCTCCCCGCGCTCACGCGCCTCCTC
TCCGAGCTCGGGGAGACCATGGCCACCGCCACCGGCACCCGCCTCGTCGCGTTCGTCGCC
GACCAGTTCGGGATGGACTCATTCGACGCCGCGCGCGACGCCGGCGTGCGGACGCGCTGC
CTCTTCATACCCATGAACCTCCACGCGCTCTCGCTCGTCCTCGACCTCCCGGACCTCGCG
GCGTCCGTCCCCGGCGAGTTCCGGGACCTCGCCGAGCCGGTGCGCCTGCCCGGCTGCGTG
CCCATCCCGGGGTCCGACGTACCCTCGCCGCTGCAGGACAGGTCCAACCCTTCGTTCTCG
GTGATGGTGCACCTTGCCAAGCGCTACCGTGAAGCTGATGCCATCCTCGTCAACTCCTTC
GACGCCGTCGAGCCCGAGGTCGCCGAGGTGCTTCGCCAGCCAGAGTCCGGCCGGCCACCT
GTGTACCCTATCGGTCCACTCATACGGCAGTTCGTCGGAAGCGAAGCTGATGGCGCCGGA
GCGCTTCCACCGTCACCGCGTGCGGCGTGCCTGGAGTGGCTCGACCGGCAGCCGGCCAGG
TCGGTCATCTTCGTCTCGTTCGGGTCCGGCGGCGCGCTGCCAAAGGAGGAGATGCACGAG
CTCGCGCTCGGGCTGGAGCTCAGCGGGCAGCGGTTCCTCTGGGTGGTGCGCAGCCCCAGC
GACGAGGGCACGCTCAGCGACAACTACTACAACGCAGAGAGCAAGAAGGACCCCTTCGTC
TACCTCCCGGAAGGGTTCCTGGAGAGGACCAAGGACGTGGGTCTCCTGGTGCCGTCGTGG
GCACCGCAGACACAGGTGCTTGCACACAGGGCCACCGGAGGTTTCCTGACGCACTGCGGG
TGGAACTCGACGCTAGAGAGCCTGGTGCACGGCGTGCCGATGGTGGCCTGGCCGTTGTTC
GCCGAGCAGCGGCTTAACGCGGTGATGCTGGCGGAGGGGGTAGGAGCGGCGATACGGTTG
CCGGAGAGGAAGGATAAGGAGACCATCGCAGCGGTGGTGAGGGAGCTGATGGCAGGGGAA
GGGAAAGGTGCCATGGTGCGGGTGAAGGTGGCGGAGCTGCAGAAGGCTGCGGCAGAGGGA
CTCCGTGACGGTGGCGCCGCCACGGCGGCGCTTGACGAGGTGGTGGAGAAGTGGGAAGCT
GATGAAGCGAACTAG

Peptide Sequence

PEP ID

OQU76647
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:51743898:51745889:-1 gene:SORBI_3010G179400 transcript:OQU76647 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKAGPPPHVAMLATPGMGHLIPLAELAKRLASRHGATATLITFASTASATQRALLASLPP
AVSSLSLPPVDLSDLPRGAAIETRMSEECARSLPALTRLLSELGETMATATGTRLVAFVA
DQFGMDSFDAARDAGVRTRCLFIPMNLHALSLVLDLPDLAASVPGEFRDLAEPVRLPGCV
PIPGSDVPSPLQDRSNPSFSVMVHLAKRYREADAILVNSFDAVEPEVAEVLRQPESGRPP
VYPIGPLIRQFVGSEADGAGALPPSPRAACLEWLDRQPARSVIFVSFGSGGALPKEEMHE
LALGLELSGQRFLWVVRSPSDEGTLSDNYYNAESKKDPFVYLPEGFLERTKDVGLLVPSW
APQTQVLAHRATGGFLTHCGWNSTLESLVHGVPMVAWPLFAEQRLNAVMLAEGVGAAIRL
PERKDKETIAAVVRELMAGEGKGAMVRVKVAELQKAAAEGLRDGGAATAALDEVVEKWEA
DEAN

Transcript Sequence

Transcript ID

OQU76647
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:51743898:51745889:-1 gene:SORBI_3010G179400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCTTGACTGTGCGCATCAAGAGCCACCCATCGCCTCCAAACACCGGGAAAACCACTCGG
AAAAGACCCCCACCAAGTCCAAGACACCCGGGACCGAGCGAGCGATCATGAAGGCCGGGC
CTCCGCCGCACGTTGCCATGCTAGCGACGCCGGGGATGGGTCACCTGATCCCGCTGGCGG
AGCTGGCGAAGCGCCTGGCGTCGCGGCACGGCGCGACGGCGACGCTCATCACCTTCGCGT
CCACGGCGTCGGCAACGCAGCGCGCGCTCCTGGCCTCGCTGCCGCCCGCGGTGTCGTCGC
TCTCCCTCCCGCCCGTCGACCTCTCCGACCTGCCACGGGGCGCCGCCATCGAGACGCGCA
TGTCCGAGGAGTGCGCGCGGTCGCTCCCCGCGCTCACGCGCCTCCTCTCCGAGCTCGGGG
AGACCATGGCCACCGCCACCGGCACCCGCCTCGTCGCGTTCGTCGCCGACCAGTTCGGGA
TGGACTCATTCGACGCCGCGCGCGACGCCGGCGTGCGGACGCGCTGCCTCTTCATACCCA
TGAACCTCCACGCGCTCTCGCTCGTCCTCGACCTCCCGGACCTCGCGGCGTCCGTCCCCG
GCGAGTTCCGGGACCTCGCCGAGCCGGTGCGCCTGCCCGGCTGCGTGCCCATCCCGGGGT
CCGACGTACCCTCGCCGCTGCAGGACAGGTCCAACCCTTCGTTCTCGGTGATGGTGCACC
TTGCCAAGCGCTACCGTGAAGCTGATGCCATCCTCGTCAACTCCTTCGACGCCGTCGAGC
CCGAGGTCGCCGAGGTGCTTCGCCAGCCAGAGTCCGGCCGGCCACCTGTGTACCCTATCG
GTCCACTCATACGGCAGTTCGTCGGAAGCGAAGCTGATGGCGCCGGAGCGCTTCCACCGT
CACCGCGTGCGGCGTGCCTGGAGTGGCTCGACCGGCAGCCGGCCAGGTCGGTCATCTTCG
TCTCGTTCGGGTCCGGCGGCGCGCTGCCAAAGGAGGAGATGCACGAGCTCGCGCTCGGGC
TGGAGCTCAGCGGGCAGCGGTTCCTCTGGGTGGTGCGCAGCCCCAGCGACGAGGGCACGC
TCAGCGACAACTACTACAACGCAGAGAGCAAGAAGGACCCCTTCGTCTACCTCCCGGAAG
GGTTCCTGGAGAGGACCAAGGACGTGGGTCTCCTGGTGCCGTCGTGGGCACCGCAGACAC
AGGTGCTTGCACACAGGGCCACCGGAGGTTTCCTGACGCACTGCGGGTGGAACTCGACGC
TAGAGAGCCTGGTGCACGGCGTGCCGATGGTGGCCTGGCCGTTGTTCGCCGAGCAGCGGC
TTAACGCGGTGATGCTGGCGGAGGGGGTAGGAGCGGCGATACGGTTGCCGGAGAGGAAGG
ATAAGGAGACCATCGCAGCGGTGGTGAGGGAGCTGATGGCAGGGGAAGGGAAAGGTGCCA
TGGTGCGGGTGAAGGTGGCGGAGCTGCAGAAGGCTGCGGCAGAGGGACTCCGTGACGGTG
GCGCCGCCACGGCGGCGCTTGACGAGGTGGTGGAGAAGTGGGAAGCTGATGAAGCGAACT
AGCAGAAGGTGCCCGATCGAGAACACCTAGCATTGCAATTGCAATGCTCTGCCCAGCAGA
GTATGTCTGCAGTTTTAAGACAAAATCTCATGAGTTGTATGTTCTTGAATTGAATCTCCC
GTAGTTTTATGTATGCAAGGATTAAGTTTACAGAGAGGACCAGTGGGTCGTTTCTTTGTT
TGATCTTCATTTGTGTGGTCATGTAAATAATCATTGGAGGGACCTAGATCAGATGCAGCA
GCAGTGTAGCACCTGATCCGACCATCCAGCAAAGGATTCAACGTCCGTGACCATTCGGAC
ATTACCACTCTAACTGGTAGCTGCTAAACTACTGCTCTTAGCATTAGCATTTAGCAACCG
ATGGGATGACTAAATGAAGCTATTGCTAGCTACTTAGCAATCTGATGGGATGGCATGGAT
ATATTAAAAAAT