Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76599
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:50682130:50686559:-1 gene:SORBI_3010G172400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACCCACGGCGGCGGCCCGCGCCCCTGCCACCTCCTCATCCTCCTCGCCGCCGCC
GCGCTCTACTCCGCGTCCTCCCCCGCCGGCGCCTTCTACCTCCCCGGCGTCGCCCCCCGC
GACTTCCAGAAGGATGATGAACTTCAAGTGAAAGTCAATAAATTGTCATCTATAAAAACA
CAGCTTCCATATGACTACTATTTCCTGGATTACTGCAAACCTGAGGCGATTAAGAACAGT
GCTGAGAACTTAGGCGAAGTCCTTCGTGGGGACCGCATCGAAAATTCTGTCTACAATTTC
AAGATGAGGAGGGATGAGAGTTGCAAGGTTGTTTGTCGAAAGCAGCTTTCTCAAGAAGCT
GCGAAGAATTTCAAAGAAAAGATTGATGATGAATACCGAGTAAACATGATCCTAGATAAT
CTTCCAGTTGTGGTACCTAGGCAGACACGGGAAGGAAGCCAAACACCAAGCTTTGAACAT
GGTTACCGAGTAGGTTACAAGCTCAAAGATGACAAGTATTATATCAACAATCACTTGAGT
TTTAAAGTGTTGTACCATGAAGACCAAACTTCTCCTGATGCTCGCATTGTTGGCTTCCAT
GTGATTCCTAGCAGCATCAAGCATGAATATGGTGCCTGGGATGACAATAATCCCACAGCG
CAAACTTGCAATGCTAACATTAAGATTACACCTGGTAGTCACACTCCTCAAGAGGTGGCC
CCTGATGCATATGTTGTATTCTCTTATGACGTTACTTTTGAGTCCAGTGATATCATATGG
GCATCTCGATGGGATGTATACCTTCTTTCCAGTGATAGTCAAATACACTGGTTCTCAATT
GTTAACTCATTGATGATCGTCCTATTCCTTTCTGGTATGGTGGCCATGATCATGATGAGA
ACTCTTTACAAGGACATAGCAAACTATAATCAGCTTGACAACCAGGATGAGGCTCAGGAA
GAAACTGGATGGAAGTTAGTGCATGGTGATGTATTCCGGCCTCCTGTTCACTCAGGCCTC
CTTTGTGTCTATGTTGGCACTGGTGTTCAGTTCTTTGGGATGACACTTGTAACCATGATG
TTTGCTCTTCTTGGATTCTTATCGCCTGCAAACCGTGGAGGACTTATGACTGCTATGGTC
CTTTTGTGGGTGTTCATGGGTGTATTGGCAGGATACACCTCATCTCGCCTGTACAAGATG
TTCAAAGGCACTGAATGGAAGAAGATCACCCTCAAAACTGCCTTCATGTTTCCTGGTATT
ATCTTTTCGGTCTTCTTCTTCCTGAATGCACTGATCTGGGGTGAGAAATCATCTGGTGCA
GTTCCTTTTGGAACAATGTTCGCATTGTTCCTCCTCTGGTTTGGCATCTCTGTGCCACTG
GTCTTTGTTGGAAGTTTCTTGGGATTCAAGCAGCCAGCCATTGAGGACCCAGTGAAGACA
AACAAGATTCCCAGGCAAATTCCTGAGCAAGCATGGTACCTGCAGCCAGCTTTTGCAATA
CTAGCTGGCGGCATATTGCCATTTGGGGCTGTCTTTATTGAGCTCTTCTTCATCCTGACA
TCTATCTGGCTGAACCAGTTCTACTACATCTTTGGCTTCCTCTTCATAGTCTTTGTCATC
CTCATTGTGACATGTGCTGAGATCACAATTGTGCTATGCTACTTCCAGCTGTGCAGTGAG
GATTACCACTGGTGGTGGAGGGCATACCTGACTGCAGGCTCGTCAGCACTCTATTTGTTT
GCTTATGCTATCTTCTACTTCTTCAATAAGTTGGAGATCACAAAGCTCGTCTCAGGCATC
CTGTACTTTGGTTACATGCTGATCATCTCTTATGCCTTCTTTGTGCTGACTGGTACCATT
GGCTTCTATGCCTGCTTCTGGTTCGTGAGGAAGATATATGCTTCTGTGAAGATCGACTGA

Peptide Sequence

PEP ID

OQU76599
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:50682130:50686559:-1 gene:SORBI_3010G172400 transcript:OQU76599 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATHGGGPRPCHLLILLAAAALYSASSPAGAFYLPGVAPRDFQKDDELQVKVNKLSSIKT
QLPYDYYFLDYCKPEAIKNSAENLGEVLRGDRIENSVYNFKMRRDESCKVVCRKQLSQEA
AKNFKEKIDDEYRVNMILDNLPVVVPRQTREGSQTPSFEHGYRVGYKLKDDKYYINNHLS
FKVLYHEDQTSPDARIVGFHVIPSSIKHEYGAWDDNNPTAQTCNANIKITPGSHTPQEVA
PDAYVVFSYDVTFESSDIIWASRWDVYLLSSDSQIHWFSIVNSLMIVLFLSGMVAMIMMR
TLYKDIANYNQLDNQDEAQEETGWKLVHGDVFRPPVHSGLLCVYVGTGVQFFGMTLVTMM
FALLGFLSPANRGGLMTAMVLLWVFMGVLAGYTSSRLYKMFKGTEWKKITLKTAFMFPGI
IFSVFFFLNALIWGEKSSGAVPFGTMFALFLLWFGISVPLVFVGSFLGFKQPAIEDPVKT
NKIPRQIPEQAWYLQPAFAILAGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVI
LIVTCAEITIVLCYFQLCSEDYHWWWRAYLTAGSSALYLFAYAIFYFFNKLEITKLVSGI
LYFGYMLIISYAFFVLTGTIGFYACFWFVRKIYASVKID

Transcript Sequence

Transcript ID

OQU76599
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:50682130:50686559:-1 gene:SORBI_3010G172400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACTACTCGCACTTCCTCACCGGCCACCACCTCCCCCGCCCATCCCGCTCCTTTCTCCGCC
CGCACGCCTCCGGGACCCGGCCCCAACCATGGCGACCCACGGCGGCGGCCCGCGCCCCTG
CCACCTCCTCATCCTCCTCGCCGCCGCCGCGCTCTACTCCGCGTCCTCCCCCGCCGGCGC
CTTCTACCTCCCCGGCGTCGCCCCCCGCGACTTCCAGAAGGATGATGAACTTCAAGTGAA
AGTCAATAAATTGTCATCTATAAAAACACAGCTTCCATATGACTACTATTTCCTGGATTA
CTGCAAACCTGAGGCGATTAAGAACAGTGCTGAGAACTTAGGCGAAGTCCTTCGTGGGGA
CCGCATCGAAAATTCTGTCTACAATTTCAAGATGAGGAGGGATGAGAGTTGCAAGGTTGT
TTGTCGAAAGCAGCTTTCTCAAGAAGCTGCGAAGAATTTCAAAGAAAAGATTGATGATGA
ATACCGAGTAAACATGATCCTAGATAATCTTCCAGTTGTGGTACCTAGGCAGACACGGGA
AGGAAGCCAAACACCAAGCTTTGAACATGGTTACCGAGTAGGTTACAAGCTCAAAGATGA
CAAGTATTATATCAACAATCACTTGAGTTTTAAAGTGTTGTACCATGAAGACCAAACTTC
TCCTGATGCTCGCATTGTTGGCTTCCATGTGATTCCTAGCAGCATCAAGCATGAATATGG
TGCCTGGGATGACAATAATCCCACAGCGCAAACTTGCAATGCTAACATTAAGATTACACC
TGGTAGTCACACTCCTCAAGAGGTGGCCCCTGATGCATATGTTGTATTCTCTTATGACGT
TACTTTTGAGTCCAGTGATATCATATGGGCATCTCGATGGGATGTATACCTTCTTTCCAG
TGATAGTCAAATACACTGGTTCTCAATTGTTAACTCATTGATGATCGTCCTATTCCTTTC
TGGTATGGTGGCCATGATCATGATGAGAACTCTTTACAAGGACATAGCAAACTATAATCA
GCTTGACAACCAGGATGAGGCTCAGGAAGAAACTGGATGGAAGTTAGTGCATGGTGATGT
ATTCCGGCCTCCTGTTCACTCAGGCCTCCTTTGTGTCTATGTTGGCACTGGTGTTCAGTT
CTTTGGGATGACACTTGTAACCATGATGTTTGCTCTTCTTGGATTCTTATCGCCTGCAAA
CCGTGGAGGACTTATGACTGCTATGGTCCTTTTGTGGGTGTTCATGGGTGTATTGGCAGG
ATACACCTCATCTCGCCTGTACAAGATGTTCAAAGGCACTGAATGGAAGAAGATCACCCT
CAAAACTGCCTTCATGTTTCCTGGTATTATCTTTTCGGTCTTCTTCTTCCTGAATGCACT
GATCTGGGGTGAGAAATCATCTGGTGCAGTTCCTTTTGGAACAATGTTCGCATTGTTCCT
CCTCTGGTTTGGCATCTCTGTGCCACTGGTCTTTGTTGGAAGTTTCTTGGGATTCAAGCA
GCCAGCCATTGAGGACCCAGTGAAGACAAACAAGATTCCCAGGCAAATTCCTGAGCAAGC
ATGGTACCTGCAGCCAGCTTTTGCAATACTAGCTGGCGGCATATTGCCATTTGGGGCTGT
CTTTATTGAGCTCTTCTTCATCCTGACATCTATCTGGCTGAACCAGTTCTACTACATCTT
TGGCTTCCTCTTCATAGTCTTTGTCATCCTCATTGTGACATGTGCTGAGATCACAATTGT
GCTATGCTACTTCCAGCTGTGCAGTGAGGATTACCACTGGTGGTGGAGGGCATACCTGAC
TGCAGGCTCGTCAGCACTCTATTTGTTTGCTTATGCTATCTTCTACTTCTTCAATAAGTT
GGAGATCACAAAGCTCGTCTCAGGCATCCTGTACTTTGGTTACATGCTGATCATCTCTTA
TGCCTTCTTTGTGCTGACTGGTACCATTGGCTTCTATGCCTGCTTCTGGTTCGTGAGGAA
GATATATGCTTCTGTGAAGATCGACTGATTAAACAACCAGTGTCTAGAGAAACCTTTTTT
CTGCTCATAGAGTACCTTCTACCAAGGTTTTGCTGCAATGTCGTGCATGGTGCTGCTGGA
TTGACATATAAAGGAAACTGGGGTTCTGGATGGGATTCCATGGGTTTTGGTAGAATATGT
GTAGCCTGTTAGGAGCAAGAACTGGTGGAAGTTCAAGTGCGATCTAGATACGCGATGTTG
TAGTGCAACATGGATTTTGTACGCCTAAAGATGTTCAGTGCTGCATTGTAATATACCTTG
ATTTGCCCTGCTTGTTCCACATCATGCCCTGTGCGATTGAGCCTTTGACGTGCTTAGGTT
CTTCATTA