Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76335
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:18282921:18289318:1 gene:SORBI_3010G132300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACGACCCGTCGGAGATCCGCAACCTCCCCATCGACATCGCCTTTGGCCGCCTCCAG
GAGTGGCTCGTCGACCGCAAGCGAGTGCCGCACGACTGGCGGAAGCGCCTCGCCGGCATT
CGCGCCCGCGTCGCCTCCGCCTTCGCCGCCCTGCCGCGGGACCTGCACCCCTCGCTCCTC
GCCCTCGACCCCGAAGAAATTGGGTACCTTGAAGCGAGGAAGATATACGGAATTCTTCTA
GACTCCAACACCGAGACTCGCAACATATTTGGCCGCCTGACGGGATCCGCGGGTGAATGG
GAGTCCATTGTTAAAGCTTATGACAAGGACCATGTCTTCCTTGGAGAGGCAGCACAGATC
ATGGTTCAAAATGTTAACTATGACATTCCATATCAGAGGAAGCAGATGCAGAAGACTCAG
CAGCAGCTTGCAGAGCTTGATCGAAGGGAGGCTGACATCAAGCGCCTTGCAGCATTGTCA
GCTACTAGATATGTAGAAGCTTGCCAGGAACTTGGCTTGCAGGGAATAAATGTGAGGGAA
GAACTAATAGAGTCTGCAAAAACACTTCCATCTACTTTTAGCAAAATCTTGGAGGCCCTG
AACAGTGATCCTGTCTCAAATGCCATGGAGTACTACACAACTTTTGTCAAGGATTGCCAT
ACTGAGGACATGGGAAATTGTGTTTCTGTGCTACACAAGCTGAAAGAGTTGCAGGCCAAT
CCCCCTTCTTTGCATGTCTCAGTATATAATGAGATCAAAAGTTCTCTTGTTGAGGCACCG
GAATCTCATGGACAAATTGACTCAAATGTTGCTGATGATGATATTGACTGGGACATTTCT
GTGGACGCTAATGAAATTGATTGGGACATTGGTGCTGTGGAACAGCCTGTCGAAGAATCT
GGCAATGGTTTTGGATCATATGAAATTATTGACGCTAATATAGAGCTGGCCGGTTCTGAA
AATTATAATGTTAGTGTCGCAGACAAATCCTTGAACAAAGATCTTGCATCATCTGAGTCT
GGTATTTGCTGGGACATCACTGCTGATAGTTCTGAAGAAATTGCTAGTATACAGAATGCT
CCATCTGAATTCGAGCAACCACAGTCTCAAATGATAACTGAAGATAGAAGTCGGTTGTTG
GAAAAGGAATATAGGAATGACATTCTGGATGATTTACTTGAGGTAAAATCATTTTTGACA
CAACGCTTAGGGGAGATGAGGAATGCAGATACATCATCTCTACAGCATCAAGTGCAAGCT
GTCTCACCTTTTGTTCTCCAGCAGCATGCTCCTGATAGTTTGGAGAATATGCTTGTAGAG
GTTTCTTCAGCAATCTCATTGCTAACTAATCAGAAGACTCTTGACCTTATAATGATCCTT
AATTCTAAAAGGTTTCTGGACAGATTAGTGTCAACCTTAGAAGAGAAGAAGCATCATGAG
GTTAAATTACGGGAAGGTTTAGGTGATTTATCTGTTAAGCGTATGGAGCTGCAAAACGCA
CTGTCATCATCATGGCCAAAGCAAGAGGCAGCAATTACAAAAACAAGGGAACTAAAGAAG
CTGTGTGAGTCAACACTATCGTCTGTTTTTGATGGAAGGCCAGTGCATATAATTGGAGAG
ATCAACACTTTACTGAGCTCAAGTGTGTTGCCGGTAGAATTCTATTCTGGTATTGTCGAC
TAA

Peptide Sequence

PEP ID

OQU76335
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:18282921:18289318:1 gene:SORBI_3010G132300 transcript:OQU76335 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MHDPSEIRNLPIDIAFGRLQEWLVDRKRVPHDWRKRLAGIRARVASAFAALPRDLHPSLL
ALDPEEIGYLEARKIYGILLDSNTETRNIFGRLTGSAGEWESIVKAYDKDHVFLGEAAQI
MVQNVNYDIPYQRKQMQKTQQQLAELDRREADIKRLAALSATRYVEACQELGLQGINVRE
ELIESAKTLPSTFSKILEALNSDPVSNAMEYYTTFVKDCHTEDMGNCVSVLHKLKELQAN
PPSLHVSVYNEIKSSLVEAPESHGQIDSNVADDDIDWDISVDANEIDWDIGAVEQPVEES
GNGFGSYEIIDANIELAGSENYNVSVADKSLNKDLASSESGICWDITADSSEEIASIQNA
PSEFEQPQSQMITEDRSRLLEKEYRNDILDDLLEVKSFLTQRLGEMRNADTSSLQHQVQA
VSPFVLQQHAPDSLENMLVEVSSAISLLTNQKTLDLIMILNSKRFLDRLVSTLEEKKHHE
VKLREGLGDLSVKRMELQNALSSSWPKQEAAITKTRELKKLCESTLSSVFDGRPVHIIGE
INTLLSSSVLPVEFYSGIVD

Transcript Sequence

Transcript ID

OQU76335
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:18282921:18289318:1 gene:SORBI_3010G132300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCGCTCACTCTCGTCTTCTCCCCGATCGGCTCCGGCCTGCGGCGCTCGCGTTCGTCATCC
CCTTCCGGCCTTCCCCCTCGCCGGCCGCGTGATCCTCCTCTGCCGCGCGGACCCCCGCGG
GCGCGACGATGCACGACCCGTCGGAGATCCGCAACCTCCCCATCGACATCGCCTTTGGCC
GCCTCCAGGAGTGGCTCGTCGACCGCAAGCGAGTGCCGCACGACTGGCGGAAGCGCCTCG
CCGGCATTCGCGCCCGCGTCGCCTCCGCCTTCGCCGCCCTGCCGCGGGACCTGCACCCCT
CGCTCCTCGCCCTCGACCCCGAAGAAATTGGGTACCTTGAAGCGAGGAAGATATACGGAA
TTCTTCTAGACTCCAACACCGAGACTCGCAACATATTTGGCCGCCTGACGGGATCCGCGG
GTGAATGGGAGTCCATTGTTAAAGCTTATGACAAGGACCATGTCTTCCTTGGAGAGGCAG
CACAGATCATGGTTCAAAATGTTAACTATGACATTCCATATCAGAGGAAGCAGATGCAGA
AGACTCAGCAGCAGCTTGCAGAGCTTGATCGAAGGGAGGCTGACATCAAGCGCCTTGCAG
CATTGTCAGCTACTAGATATGTAGAAGCTTGCCAGGAACTTGGCTTGCAGGGAATAAATG
TGAGGGAAGAACTAATAGAGTCTGCAAAAACACTTCCATCTACTTTTAGCAAAATCTTGG
AGGCCCTGAACAGTGATCCTGTCTCAAATGCCATGGAGTACTACACAACTTTTGTCAAGG
ATTGCCATACTGAGGACATGGGAAATTGTGTTTCTGTGCTACACAAGCTGAAAGAGTTGC
AGGCCAATCCCCCTTCTTTGCATGTCTCAGTATATAATGAGATCAAAAGTTCTCTTGTTG
AGGCACCGGAATCTCATGGACAAATTGACTCAAATGTTGCTGATGATGATATTGACTGGG
ACATTTCTGTGGACGCTAATGAAATTGATTGGGACATTGGTGCTGTGGAACAGCCTGTCG
AAGAATCTGGCAATGGTTTTGGATCATATGAAATTATTGACGCTAATATAGAGCTGGCCG
GTTCTGAAAATTATAATGTTAGTGTCGCAGACAAATCCTTGAACAAAGATCTTGCATCAT
CTGAGTCTGGTATTTGCTGGGACATCACTGCTGATAGTTCTGAAGAAATTGCTAGTATAC
AGAATGCTCCATCTGAATTCGAGCAACCACAGTCTCAAATGATAACTGAAGATAGAAGTC
GGTTGTTGGAAAAGGAATATAGGAATGACATTCTGGATGATTTACTTGAGGTAAAATCAT
TTTTGACACAACGCTTAGGGGAGATGAGGAATGCAGATACATCATCTCTACAGCATCAAG
TGCAAGCTGTCTCACCTTTTGTTCTCCAGCAGCATGCTCCTGATAGTTTGGAGAATATGC
TTGTAGAGGTTTCTTCAGCAATCTCATTGCTAACTAATCAGAAGACTCTTGACCTTATAA
TGATCCTTAATTCTAAAAGGTTTCTGGACAGATTAGTGTCAACCTTAGAAGAGAAGAAGC
ATCATGAGGTTAAATTACGGGAAGGTTTAGGTGATTTATCTGTTAAGCGTATGGAGCTGC
AAAACGCACTGTCATCATCATGGCCAAAGCAAGAGGCAGCAATTACAAAAACAAGGGAAC
TAAAGAAGCTGTGTGAGTCAACACTATCGTCTGTTTTTGATGGAAGGCCAGTGCATATAA
TTGGAGAGATCAACACTTTACTGAGCTCAAGTGTGTTGCCGGTAGAATTCTATTCTGGTA
TTGTCGACTAAGGCTTCTTGAAGTGGTATGTTTACATTGTTAATTTCATCGACACCTGCA
GCATAATGAATAAATTTATCAGCTACTGCCCTGGATTCCTGAGTAAGCCACAGAACAAAC
TGATATAAAATGTAGTTAGACAGTTGAACCGTTTTCTGTGATGTAGATTGTAGGATTGTT
GTATTTCTTCTTGGTGTATAGCAGGAGTTCTTCTATTCCTTTTGGATAGATGTAGAGCCA
AGGAGATCCAGCCTGGATACAAAGATTCATTTTTTTCATGCCTATGAATCTGCAATGACT
TTCGGATTATCTATAAATAACCCTTCATTATTTATCATCGACTCAGTTACACAACTGTCA
AACATGAAGCAATATAATTTTCCTTTTTGTGGAAGTCATACCTTTGGACCAATAACTGTC
CCGTTTCTTTCAACTGTTGTTACAATAATACAGGTCCTGAAAACTCTTAGTCCACCCAAG
TAATTTGAATAGTAGAATAGAAATAACATGATTACATGATTACCTGATTGATTAGTCCGT
GAATCAGTATTATAGCTTCTGTTTCCATTGTTACTGTGTTTGGTATTCTGAACATATCTT
GCTGTATAGTAGTTGAGGCCAATGAAGTCGAATGATCCATGTATGGCTTTTGACTGTTCT
TTTGTGAATCTTGGTAATCTATTACCAACTAGTGTTCTCATGCTGAGTGGGTAATCTCCC
TTAGTTAGAGGATCCATGAACCTGTTCAAATTATCACCAAATTATGTAAACAGTGTCTTA
GAAGAATCTTTCTGATTTTGATTTAGAGGAAACTTCATGGACGAAACCTGAAGTCTATCT
AGTAAGAACTAAATGAAAACTCACCAGCCATACATAAATTCTAGTGCGCGCTTGGCAGCA
TCCTTATCTCCCTTGGAATTTGTGTAGGGAATCATCCAATTGCTGACTAGAGTGATTCCT
ATGCTCCCTTTTTGCTTCTCCTGCATGATTATTAATTATCATTGTAACTGCAAACTATCA
AGTATATGGAAATGATTAAATGAGTACTAGTGTTTTCAGTGGTTACTGGTTAGCTATCAT
AAAAGTTGGATGAACCTTGGAATTCTCGTCTCTTGTCTGAGACACCTTGATGTGCTAGTT
TTGTTATCAAACATTGCGTAGAACTCTAGAAAATGTCCAGCACTACCATTATTGTTTATA
GGAGCAGATTGTGGCTTTATAGCTTATTTATAGTATCTACTGTCACGTTCTACTTTTGGA
GACCTAATTGTGTAAATATTTTCAATTAAATGTAATTAGAAGGTTTGTCACATTATTGAT
ATATCCTCTTTGCATGCCAGAATGCATTTTGTTATGTTATAATTGCATATATTTGATTTG
TGTGTCCCGCCCAGGTTAGACCGAGCTCTTCTCCTTGCACAGGAGGAGGCTGATCACTGG
ATGTTGGCAGGCGCCAAGAGTCTTAGAGGTCTAGTTGCTGTTAGTCATGGTGGATAGCAG
CTCCTGTAGTTGTGGTTTTGGTCGTCTCTTTTGTTATGAACAGGCGCATGTGAAAGTATA
AAAACCTGAGGTGTGTGTGTTGTGTGGTTTTCGTATTGGCTATTTGAGTCTTCTTTATCC
TTTCTTATGTAATGATACGCAGCTCTCCTGTGTATTCCAGAAAGTAATAACAATTTGGAA
ATAAAATCTGTACCTGGTATTTG