Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU76157
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:10:9226049:9236120:1 gene:SORBI_3010G100516 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCGGACGATGCTGCCGTCTCCCTCGCCTCAAGCCACCGTCAAGAGAGAAATCGAC
GACGCAGAGCCCAGCGCTTACACGCCGGCGCCACCGCCTCCGCCCCGCAAGAAGCGCCGC
CTCCCAGTAACCCCGACCCAGCTTCCCCTAAGCCCTCCCCTCCTCACGCCCCAGACTATC
CCGTCAGTGGCATCAGAGGGCACGTCCTTGGCCGGCTTAACGCCGACGCCCGCGGGCTCC
GCCGTCAAGGTCGAGCCCGGCGCGGACGCCGGGGATGGGGGGCACCGGAGGGCGGCCGGG
GAACCGAACGAGTCGCCGGACCCCCGCTCCGTCGTGAGGCCCGCGGCAGCAGAGCCTCCC
ACCCTCTGGCTTAACCGACGCCGCTTGGGCCAGATCCTCCACGAGCTCGCGGGAGCGCAC
GAGTGGCGCGATGCGGCCAGCGTCGTCTCGACGCTCCTCAGCGGCAACCGAAGGGTCGAC
TCCTACGAGGACACCCGCAGAATGTTCGTGGTGGCCATGGAGATCCATAAGCGGCTTGCT
GAGGACAGCGGCGTGCAGCATGGTGTCAGGAGCAGCTACTACCTCAGAACACAGAAGTTG
TTCAATGTTTGGATGCGAAAGCTGATTTGGTTTCCTTCTTGCCCAAAAAAAAACTTGGTT
ACACTTGAACTGGCCCTATTTTACCTTTCACAAGGCAACATCGACAATGCACACATCGCA
ACAAGAACCCTTATCGCCAAGGGCAAACTGCAGACAGAACCAATCTTAAATCTGGTTCAT
GGTTTGATATCATTTGATAAATGGTATTCTGGCTTGCCTAAAGATATGCAAGTTGAGGAT
TTTGATGTTTATGATGAATCATGTGGTATTTCCATGAAGTCAAATGGTTCTGAAGGAACT
GATCTTCTGGATCATTCATATGAGGATAGCATGGATATTGTTCAGTCCAGTTTGGCTTCT
TGCTCTTCAGAAAGTTCGATCAATAATGAGAATGTAGGCAGAAAAATGAATAACAAACCT
GGTTTTGTTCACCCTAAGGAGGAAATAGACCCACTTGAATCACAAGCAAATGAAAACTTA
CGAAGCATATTTTTGGATACCTCTGATGGTCCTACTTGTGGATTGGAGCAGAGCCTGCTG
CCTTTAAAGCTAAAGTTTGCTACTGGGGCTTCCAATGATTCTTTTTATAAATATATGAAG
TACAAGTCAGTGCCGAATACCTTATATGAAGATGCAGAAAAATGTCTAAGATTGGCTCTT
TATTCAAATCCGCCGGTGATGGCTGCGTTATTGCCACTAATACAGATTCTCCTCCTTGGT
GATAAACTGAAAGATGCACTAAATGAGCTTGAAAAGGCCTGCCTCAGTTCAACAACAGCC
CTACCTTTCAGGTTGAGAGGTAGGCTGCTGGAAGAGTATGACCAAAACCAGGTATCAACC
ATTTCCTCTTGCTATGAGGAGGCTTTGAGAAGAGATCCTACATGTAGCTACTCTATGGAG
AGGCTAATCAAAATGCATAGAAAAGGTGATTGCAAGCTCCTGGCTGCTAAGGCAGCTTGT
GCTGCTCATTTGTTTGGACCAGAATTCCCATATGTCAAAGCAGTTGGGAGCTATATTGCA
AAGCAAGAAGCTCTGGATGAAATCAGTATCCTAGTCAGAAATAAGCAGAACTCTGTCAGG
CTATTAGAAACTTTGGAGAAACTAACATGA

Peptide Sequence

PEP ID

OQU76157
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:10:9226049:9236120:1 gene:SORBI_3010G100516 transcript:OQU76157 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MARTMLPSPSPQATVKREIDDAEPSAYTPAPPPPPRKKRRLPVTPTQLPLSPPLLTPQTI
PSVASEGTSLAGLTPTPAGSAVKVEPGADAGDGGHRRAAGEPNESPDPRSVVRPAAAEPP
TLWLNRRRLGQILHELAGAHEWRDAASVVSTLLSGNRRVDSYEDTRRMFVVAMEIHKRLA
EDSGVQHGVRSSYYLRTQKLFNVWMRKLIWFPSCPKKNLVTLELALFYLSQGNIDNAHIA
TRTLIAKGKLQTEPILNLVHGLISFDKWYSGLPKDMQVEDFDVYDESCGISMKSNGSEGT
DLLDHSYEDSMDIVQSSLASCSSESSINNENVGRKMNNKPGFVHPKEEIDPLESQANENL
RSIFLDTSDGPTCGLEQSLLPLKLKFATGASNDSFYKYMKYKSVPNTLYEDAEKCLRLAL
YSNPPVMAALLPLIQILLLGDKLKDALNELEKACLSSTTALPFRLRGRLLEEYDQNQVST
ISSCYEEALRRDPTCSYSMERLIKMHRKGDCKLLAAKAACAAHLFGPEFPYVKAVGSYIA
KQEALDEISILVRNKQNSVRLLETLEKLT

Transcript Sequence

Transcript ID

OQU76157
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:10:9226049:9236120:1 gene:SORBI_3010G100516 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACAGACTCCTCACTCCTGCTAAGCCGGCGCGAGCGCGGCTCTTGCAAAACCCTTGACC
CGGACGGTGCGCCGCCGCCGCGGCGCCGCTTCGGCCTCACGCCATGGCGCGGACGATGCT
GCCGTCTCCCTCGCCTCAAGCCACCGTCAAGAGAGAAATCGACGACGCAGAGCCCAGCGC
TTACACGCCGGCGCCACCGCCTCCGCCCCGCAAGAAGCGCCGCCTCCCAGTAACCCCGAC
CCAGCTTCCCCTAAGCCCTCCCCTCCTCACGCCCCAGACTATCCCGTCAGTGGCATCAGA
GGGCACGTCCTTGGCCGGCTTAACGCCGACGCCCGCGGGCTCCGCCGTCAAGGTCGAGCC
CGGCGCGGACGCCGGGGATGGGGGGCACCGGAGGGCGGCCGGGGAACCGAACGAGTCGCC
GGACCCCCGCTCCGTCGTGAGGCCCGCGGCAGCAGAGCCTCCCACCCTCTGGCTTAACCG
ACGCCGCTTGGGCCAGATCCTCCACGAGCTCGCGGGAGCGCACGAGTGGCGCGATGCGGC
CAGCGTCGTCTCGACGCTCCTCAGCGGCAACCGAAGGGTCGACTCCTACGAGGACACCCG
CAGAATGTTCGTGGTGGCCATGGAGATCCATAAGCGGCTTGCTGAGGACAGCGGCGTGCA
GCATGGTGTCAGGAGCAGCTACTACCTCAGAACACAGAAGTTGTTCAATGTTTGGATGCG
AAAGCTGATTTGGTTTCCTTCTTGCCCAAAAAAAAACTTGGTTACACTTGAACTGGCCCT
ATTTTACCTTTCACAAGGCAACATCGACAATGCACACATCGCAACAAGAACCCTTATCGC
CAAGGGCAAACTGCAGACAGAACCAATCTTAAATCTGGTTCATGGTTTGATATCATTTGA
TAAATGGTATTCTGGCTTGCCTAAAGATATGCAAGTTGAGGATTTTGATGTTTATGATGA
ATCATGTGGTATTTCCATGAAGTCAAATGGTTCTGAAGGAACTGATCTTCTGGATCATTC
ATATGAGGATAGCATGGATATTGTTCAGTCCAGTTTGGCTTCTTGCTCTTCAGAAAGTTC
GATCAATAATGAGAATGTAGGCAGAAAAATGAATAACAAACCTGGTTTTGTTCACCCTAA
GGAGGAAATAGACCCACTTGAATCACAAGCAAATGAAAACTTACGAAGCATATTTTTGGA
TACCTCTGATGGTCCTACTTGTGGATTGGAGCAGAGCCTGCTGCCTTTAAAGCTAAAGTT
TGCTACTGGGGCTTCCAATGATTCTTTTTATAAATATATGAAGTACAAGTCAGTGCCGAA
TACCTTATATGAAGATGCAGAAAAATGTCTAAGATTGGCTCTTTATTCAAATCCGCCGGT
GATGGCTGCGTTATTGCCACTAATACAGATTCTCCTCCTTGGTGATAAACTGAAAGATGC
ACTAAATGAGCTTGAAAAGGCCTGCCTCAGTTCAACAACAGCCCTACCTTTCAGGTTGAG
AGGTAGGCTGCTGGAAGAGTATGACCAAAACCAGGTATCAACCATTTCCTCTTGCTATGA
GGAGGCTTTGAGAAGAGATCCTACATGTAGCTACTCTATGGAGAGGCTAATCAAAATGCA
TAGAAAAGGTGATTGCAAGCTCCTGGCTGCTAAGGCAGCTTGTGCTGCTCATTTGTTTGG
ACCAGAATTCCCATATGTCAAAGCAGTTGGGAGCTATATTGCAAAGCAAGAAGCTCTGGA
TGAAATCAGTATCCTAGTCAGAAATAAGCAGAACTCTGTCAGGCTATTAGAAACTTTGGA
GAAACTAACATGATGATTCGTCTTGATCCGGCATTTCACCATTGCTTGGTGTTGGTAATT
AGCATAATGTTGACAAATTTTTGTAGACCCCTCTCAGGGGGCAAAATTTTGTAGGATCAA
TAGCATGCCACCAATGTAGTAGTGTTGTAGGCAGAACCTTGGTGCTGGTGATGCCATATG
TAGCAGCAAAAACAGCAGACATCAGAAACATGGAAATAGAAGCCATCTAGTTTTTTGCTC
CCTTGTTTTTTGTGAAATGTAAATACAAGGGCGAGAAAGATCCTGAAAACTATACTTCGT
TATACTCTGAGGGCCTTTTTGGCAACTTTAGAAATGAAATTTTAAGCTCCTGTAATCCCT
TGTAATTGTTTCTCTTGTAATTTGCTGTTTGGATGAACAAAGTCCACTGCAGCTCAGTCT
TGTGAATTAAGATGG