Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU75638
CDS Infomation

cds supercontig:Sorghum_bicolor_NCBIv3:super_199:9643:13059:-1 gene:SORBI_3K020500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGAAGCCATGCTCTCTCCTGGTCCACTTCGACAAGGGCTCCGCCGCGATGGCCAAC
GAGATCAAGGCGGATCTGGAGGGCAGCGACGGCCCCGCCAAGGCCGACGCCATGCGCCGC
GCCATCTCGCTCCTCCTCAACGGCGAGACCCTCCCGCAGCTCTTCATCACCATCGTCCGC
TACGTGCTCCCCTCCGAGGACCACACCGTGCAGAAGCTCCTCCTCCTCTACCTCGAGATC
ATTGACCGCCGGGATCCGGCCGGCCGCGCCCTGCCGGAGATGATCCTCATCTGCCAGAAC
CTCCGCAACAACCTCCAGAGCCCCAACGAGTACATCCGCGGCGTCACGCTGCGGTTCCTC
TGCAGGCTCTCCGAGCCCGAGGTGCTCGAGCCGCTCGTCCCGTCCGTGCTCGCCAACCTC
GAGCACAGGCACCACTTCATCAGGAGGCACGCCGTCTCCGCGGTTTCCGCCATCTACCGC
CTCCCGCATGGCGACCAGCTCATCCCCGACGCCCCGGAGCTCGTCGAGCGGTTCCTCGCC
TCTGAGCAGGACGCGTCCGCGCGGAGGAACGCATTCCTCATGCTCTGCGCCTGCGCACAG
GACCGCGCCGTCGCCTACCTGCTCTCCAACGCCGACCGAGTCGCTGAGTGGCCCGATCTG
CTGCAGATGGCCGTTGTGGATCTCATCCGCAAGGTCTGCCGATCCCAGAACCGCGCCAAC
AAGGGAAGGTATATCACCATCATTACCTCGCTGCTCTCCACGCCCAGCACTGCGGTTGTT
TATGAATGTGCTGGCGCCCTGGTGTCACTCTCTTCGGCGCCCACGGCCGTGCGAGCCGCT
GCCAACACCTACTGCCAGTTGCTCTCGTCCCAGAGTGACAACAATGTGAAGCTCATTCTC
CTGGATCGCCTCAACGAGCTCCGCATCTCGCACCGGGATGTCATGGTGGGGGTGGTGATG
GATGTGCTTCGTGCACTGGCCAGCCCCAACTTAGATGTCAAGAGGAAGGTTCTTGATTTA
GTGCTTGATCTGCTCACCCCGCGTAATGTCGAGGAGGTGGTGCTTTATCTGAAGAAGGAG
GTGGTCAAGACGCAGGCCGGAGACCTCGAGAAGGGTGGCGAGTACCGCCAGATGCTGGTG
CAGGCCATCCATGCCTGCGCTGTTGAGTACCCAGAGGTGGCTGGGTCTGTAGTGCACCTC
CTCATGGACTTTCTTGGTGACACCAATGTTGCTGCAGCTGTTGATGTTGTGCTGTTTGTC
CGTGAGATCATTGAGACCAATCCGAAGCTGCGTGTTTCCATGATCCAAAGGCTGATTGAT
ACATTCTATCAGATTCGGGCATCCCGGGTCTGCTCATGTGCTCTCTGGATCCTTGGGGAG
TACTCCCTCTCTCTTTCAGAGGTTGAAAGCGCTATTGCTACCATTAAACAATGTCTTGGG
GATCTACCATTTTACACTGTCTCTGATGAAGGGGAGGCAACAGATTCCGCCAAGCCAGCC
CAGGCGGTGGTGAACTCTGTCACTGTATCTTCCAGGCGGCCTGTTGTTCTTGCAGATGGT
ACCTATGCCACACAGAGCGCTGCTACTGAGACCATTTCAACTCCATCAGTTGCTCCTGGG
TCATTAGCATCAACCCTGAACCTCAGATCACTCATTCTGTCAGGTGACTTCTTCCTGGCT
GCTGTTGTTGCATGTACCCTGACCAAGCTTGTGTTGAGGCTGGAAGAAGTGCAGCCATCT
AAGGTTGAATCAAACAAGGCTTGCACTGGAGCATTGCTGATCATGACATCGATTCTGCAG
CTGGGCCAGTCTTCTTACCTTCCCCACCCGATCGATAATGATTCATATGATAGGATTGTG
CTGTGTTTGAGATTGCTTTGCAATACTGGTGATGATGTCAGGAAGATTTGGTTGCAGTCA
TGCAGACAGAGCTTTGCGAAAATGCTTGCAGAGAAGCAGTTCAGGGAGACAGAGGAGATG
AAGGCAAAGGCACAGATCTCTCATGCCCAGCCAGATGATCTTATTGATTTTTACCACCTG
AAGAGCAGGAAGGGCATGAGCCAGCTTGAGTTGGAAGATGAGGTGCACGATGATTTGAAG
GCTGCAACTGGTGGGTTTACTAAGGATGCAGATGATGCAAACAAGCTCAACCGCATTCTT
CAATTGACTGGTTTCAGTGATCCTGTGTATGCTGAAGCATTTGTAACAGTTCACCATTAT
GACATTGTACTTGATGTTACTGTCATTAACCGTACAAAGGAGACACTTCAGAACTTGTGC
TTGGAATTGGCTACAATGGGAGACCTCAAACTTGTTGATCGCCCTCAGAACTACACCTTG
GCTCCTGAGTCTAGCAGACAGATCCGTGCTAATATCAAGGTTTCATCAACAGAGACTGGA
GTTATATTTGGCAACATAGTTTATGAGACTTCAAATGTGATGGAACGATCAGTG

Peptide Sequence

PEP ID

OQU75638
PEP Infomation

pep supercontig:Sorghum_bicolor_NCBIv3:super_199:9643:13059:-1 gene:SORBI_3K020500 transcript:OQU75638 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEKPCSLLVHFDKGSAAMANEIKADLEGSDGPAKADAMRRAISLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDRRDPAGRALPEMILICQNLRNNLQSPNEYIRGVTLRFL
CRLSEPEVLEPLVPSVLANLEHRHHFIRRHAVSAVSAIYRLPHGDQLIPDAPELVERFLA
SEQDASARRNAFLMLCACAQDRAVAYLLSNADRVAEWPDLLQMAVVDLIRKVCRSQNRAN
KGRYITIITSLLSTPSTAVVYECAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLIL
LDRLNELRISHRDVMVGVVMDVLRALASPNLDVKRKVLDLVLDLLTPRNVEEVVLYLKKE
VVKTQAGDLEKGGEYRQMLVQAIHACAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLFV
REIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAIATIKQCLG
DLPFYTVSDEGEATDSAKPAQAVVNSVTVSSRRPVVLADGTYATQSAATETISTPSVAPG
SLASTLNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKVESNKACTGALLIMTSILQ
LGQSSYLPHPIDNDSYDRIVLCLRLLCNTGDDVRKIWLQSCRQSFAKMLAEKQFRETEEM
KAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVHDDLKAATGGFTKDADDANKLNRIL
QLTGFSDPVYAEAFVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTL
APESSRQIRANIKVSSTETGVIFGNIVYETSNVMERSV

Transcript Sequence

Transcript ID

OQU75638
Transcript Infomation

cdna supercontig:Sorghum_bicolor_NCBIv3:super_199:9643:13059:-1 gene:SORBI_3K020500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGAAGCCATGCTCTCTCCTGGTCCACTTCGACAAGGGCTCCGCCGCGATGGCCAAC
GAGATCAAGGCGGATCTGGAGGGCAGCGACGGCCCCGCCAAGGCCGACGCCATGCGCCGC
GCCATCTCGCTCCTCCTCAACGGCGAGACCCTCCCGCAGCTCTTCATCACCATCGTCCGC
TACGTGCTCCCCTCCGAGGACCACACCGTGCAGAAGCTCCTCCTCCTCTACCTCGAGATC
ATTGACCGCCGGGATCCGGCCGGCCGCGCCCTGCCGGAGATGATCCTCATCTGCCAGAAC
CTCCGCAACAACCTCCAGAGCCCCAACGAGTACATCCGCGGCGTCACGCTGCGGTTCCTC
TGCAGGCTCTCCGAGCCCGAGGTGCTCGAGCCGCTCGTCCCGTCCGTGCTCGCCAACCTC
GAGCACAGGCACCACTTCATCAGGAGGCACGCCGTCTCCGCGGTTTCCGCCATCTACCGC
CTCCCGCATGGCGACCAGCTCATCCCCGACGCCCCGGAGCTCGTCGAGCGGTTCCTCGCC
TCTGAGCAGGACGCGTCCGCGCGGAGGAACGCATTCCTCATGCTCTGCGCCTGCGCACAG
GACCGCGCCGTCGCCTACCTGCTCTCCAACGCCGACCGAGTCGCTGAGTGGCCCGATCTG
CTGCAGATGGCCGTTGTGGATCTCATCCGCAAGGTCTGCCGATCCCAGAACCGCGCCAAC
AAGGGAAGGTATATCACCATCATTACCTCGCTGCTCTCCACGCCCAGCACTGCGGTTGTT
TATGAATGTGCTGGCGCCCTGGTGTCACTCTCTTCGGCGCCCACGGCCGTGCGAGCCGCT
GCCAACACCTACTGCCAGTTGCTCTCGTCCCAGAGTGACAACAATGTGAAGCTCATTCTC
CTGGATCGCCTCAACGAGCTCCGCATCTCGCACCGGGATGTCATGGTGGGGGTGGTGATG
GATGTGCTTCGTGCACTGGCCAGCCCCAACTTAGATGTCAAGAGGAAGGTTCTTGATTTA
GTGCTTGATCTGCTCACCCCGCGTAATGTCGAGGAGGTGGTGCTTTATCTGAAGAAGGAG
GTGGTCAAGACGCAGGCCGGAGACCTCGAGAAGGGTGGCGAGTACCGCCAGATGCTGGTG
CAGGCCATCCATGCCTGCGCTGTTGAGTACCCAGAGGTGGCTGGGTCTGTAGTGCACCTC
CTCATGGACTTTCTTGGTGACACCAATGTTGCTGCAGCTGTTGATGTTGTGCTGTTTGTC
CGTGAGATCATTGAGACCAATCCGAAGCTGCGTGTTTCCATGATCCAAAGGCTGATTGAT
ACATTCTATCAGATTCGGGCATCCCGGGTCTGCTCATGTGCTCTCTGGATCCTTGGGGAG
TACTCCCTCTCTCTTTCAGAGGTTGAAAGCGCTATTGCTACCATTAAACAATGTCTTGGG
GATCTACCATTTTACACTGTCTCTGATGAAGGGGAGGCAACAGATTCCGCCAAGCCAGCC
CAGGCGGTGGTGAACTCTGTCACTGTATCTTCCAGGCGGCCTGTTGTTCTTGCAGATGGT
ACCTATGCCACACAGAGCGCTGCTACTGAGACCATTTCAACTCCATCAGTTGCTCCTGGG
TCATTAGCATCAACCCTGAACCTCAGATCACTCATTCTGTCAGGTGACTTCTTCCTGGCT
GCTGTTGTTGCATGTACCCTGACCAAGCTTGTGTTGAGGCTGGAAGAAGTGCAGCCATCT
AAGGTTGAATCAAACAAGGCTTGCACTGGAGCATTGCTGATCATGACATCGATTCTGCAG
CTGGGCCAGTCTTCTTACCTTCCCCACCCGATCGATAATGATTCATATGATAGGATTGTG
CTGTGTTTGAGATTGCTTTGCAATACTGGTGATGATGTCAGGAAGATTTGGTTGCAGTCA
TGCAGACAGAGCTTTGCGAAAATGCTTGCAGAGAAGCAGTTCAGGGAGACAGAGGAGATG
AAGGCAAAGGCACAGATCTCTCATGCCCAGCCAGATGATCTTATTGATTTTTACCACCTG
AAGAGCAGGAAGGGCATGAGCCAGCTTGAGTTGGAAGATGAGGTGCACGATGATTTGAAG
GCTGCAACTGGTGGGTTTACTAAGGATGCAGATGATGCAAACAAGCTCAACCGCATTCTT
CAATTGACTGGTTTCAGTGATCCTGTGTATGCTGAAGCATTTGTAACAGTTCACCATTAT
GACATTGTACTTGATGTTACTGTCATTAACCGTACAAAGGAGACACTTCAGAACTTGTGC
TTGGAATTGGCTACAATGGGAGACCTCAAACTTGTTGATCGCCCTCAGAACTACACCTTG
GCTCCTGAGTCTAGCAGACAGATCCGTGCTAATATCAAGGTTTCATCAACAGAGACTGGA
GTTATATTTGGCAACATAGTTTATGAGACTTCAAATGTGATGGAACGATCAGTG