Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES20022
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:58428174:58432405:-1 gene:SORBI_3009G249000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGTGGCCGCGCCTCCCGCCACCGCGCGCAGCAGCAGGACCAGTCCTCCCACCACGCC
TCCTCCCGTCCTCCGCCGCCGCCGCCGCCCAAGCAGCAGCAGCAGCACCACCACCACCCC
AATAAGCCCAAGCAGCAGCAGCCCCCACCTCCGCGTCCTCCGCCGCCACACCATGCTCCT
CCCCCCGCCCCCGCCCCCACCCAGGGCGGGGCGACCAACATCGGCCGCGTGCTGGGGCGG
CCGATGGAGGACGTGCGGGCATCCTACACGTTCGGGCGTGAGCTAGGCCGGGGCCAGTTC
GGCGTGACCTACCTAGCCACGCACAAGCCCACGGGCCGCCGCTACGCGTGCAAGTCCATC
GCCACCCGCAAGCTCGCGCACCTGGACGACGTGGAGGACGTGCGGCGGGAGGTGCAGATC
ATGCACCACCTCACGGGCCACCGCAGCATCGTCGAGCTCCGGGGCGCCTACGAGGACCGC
CACTCCGTCAACCTCGTCATGGAGCTCTGTGAGGGCGGGGAGCTCTTCGACCGCATCATC
GCCCGCGGGCACTACTCCGAGCGCGCCGCCGCGTCGCTCTGCAGGGAGATCGTCTCCGTT
GTTCATAGCTGCCACTCCATGGGGGTCATGCATCGGGACCTCAAGCCTGAGAACTTCCTC
TTCCTTAGTAAGAGGGAGGACTCGCCGCTCAAGGCCACGGATTTTGGGCTCTCCGTCTTC
TTCAAGCCCGGCGAGCAGTTCAGGGATCTTGTCGGGAGCGCCTACTACGTCGCCCCGGAG
GTGCTCAAGCGGCGATACGGAGCTGAGGCGGACATATGGAGTGCCGGAGTTATCCTCTAC
ATCCTGCTATCCGGCGTTCCTCCTTTCTGGGCCGAGAACGAGGATGGCATATTTGATGCT
GTTTTGCGAGGTCATATTGACTTCGCATCTGATCCCTGGCCTTCCATATCGAATAGCGCA
AAAGATTTGGTCAAGAAGATGCTGCGCCAAGATCCCAAGGAGCGGCTTACTGCTGCTGAA
ATTTTGAACCATCCATGGATTAGGGAGGATGGAGAGGCGCCAGACAAGCCAATAGACATT
ACAGTAATAAGCAGAATGAAGCAGTTCCGGGCAATGAACAAGCTTAAGAAGGTTGCCTTG
AAGGTCGTTGCAGAGAACTTGTCAGAGGAAGAGATTGTGGGCTTGAAAGAAATGTTCAAA
TCCCTGGATACTGATAACAGTGGGACAATAACGCTGGAAGAACTGAGAGCTGGTTTACCA
AAGCTCGGCACCAAAATCTCTGAATCAGAAATAAGACAGTTGATGGAAGCGGCTGATGTT
GATGGAAATGGTACCATTGATTATGTTGAATTCATATCAGCAACAATGCACATGAATAGA
CTAGAGAAAGAGGATCACATTTTTAAAGCATTCGAGTATTTCGATAAGGACCATAGCGGG
CACATTACAGTTGATGAGTTGGAAGAAGCTCTGAAGAAGTATGATATGGGTGATGAAGCA
ACAATTAAAGAAATTATTGCTGAAGTAGATACAGATCATGATGGGAGAATCAACTACCAG
GAGTTTGTTGCCATGATGAAGAATAATAGCTCTGATATTGTTCCCAATCGGAGGCGCATG
TTTTAA

Peptide Sequence

PEP ID

EES20022
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:58428174:58432405:-1 gene:SORBI_3009G249000 transcript:EES20022 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGGRASRHRAQQQDQSSHHASSRPPPPPPPKQQQQHHHHPNKPKQQQPPPPRPPPPHHAP
PPAPAPTQGGATNIGRVLGRPMEDVRASYTFGRELGRGQFGVTYLATHKPTGRRYACKSI
ATRKLAHLDDVEDVRREVQIMHHLTGHRSIVELRGAYEDRHSVNLVMELCEGGELFDRII
ARGHYSERAAASLCREIVSVVHSCHSMGVMHRDLKPENFLFLSKREDSPLKATDFGLSVF
FKPGEQFRDLVGSAYYVAPEVLKRRYGAEADIWSAGVILYILLSGVPPFWAENEDGIFDA
VLRGHIDFASDPWPSISNSAKDLVKKMLRQDPKERLTAAEILNHPWIREDGEAPDKPIDI
TVISRMKQFRAMNKLKKVALKVVAENLSEEEIVGLKEMFKSLDTDNSGTITLEELRAGLP
KLGTKISESEIRQLMEAADVDGNGTIDYVEFISATMHMNRLEKEDHIFKAFEYFDKDHSG
HITVDELEEALKKYDMGDEATIKEIIAEVDTDHDGRINYQEFVAMMKNNSSDIVPNRRRM
F

Transcript Sequence

Transcript ID

EES20022
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:58428174:58432405:-1 gene:SORBI_3009G249000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACCAAAGTCCAAAGTCACCGAACCAAAGCCAGCCATTACCAATGCTGCTTCCTCTTCC
TCCTCCTCCACCTCAACTGCTCATGCTCCTTCCACTCCCCTCCTCCTGCTCCCAATCCTC
TTCCGCCCCGCGCCTCCTGATCGGCTGATCACACTCGCTCCCGCGCCATGGGTGGCCGCG
CCTCCCGCCACCGCGCGCAGCAGCAGGACCAGTCCTCCCACCACGCCTCCTCCCGTCCTC
CGCCGCCGCCGCCGCCCAAGCAGCAGCAGCAGCACCACCACCACCCCAATAAGCCCAAGC
AGCAGCAGCCCCCACCTCCGCGTCCTCCGCCGCCACACCATGCTCCTCCCCCCGCCCCCG
CCCCCACCCAGGGCGGGGCGACCAACATCGGCCGCGTGCTGGGGCGGCCGATGGAGGACG
TGCGGGCATCCTACACGTTCGGGCGTGAGCTAGGCCGGGGCCAGTTCGGCGTGACCTACC
TAGCCACGCACAAGCCCACGGGCCGCCGCTACGCGTGCAAGTCCATCGCCACCCGCAAGC
TCGCGCACCTGGACGACGTGGAGGACGTGCGGCGGGAGGTGCAGATCATGCACCACCTCA
CGGGCCACCGCAGCATCGTCGAGCTCCGGGGCGCCTACGAGGACCGCCACTCCGTCAACC
TCGTCATGGAGCTCTGTGAGGGCGGGGAGCTCTTCGACCGCATCATCGCCCGCGGGCACT
ACTCCGAGCGCGCCGCCGCGTCGCTCTGCAGGGAGATCGTCTCCGTTGTTCATAGCTGCC
ACTCCATGGGGGTCATGCATCGGGACCTCAAGCCTGAGAACTTCCTCTTCCTTAGTAAGA
GGGAGGACTCGCCGCTCAAGGCCACGGATTTTGGGCTCTCCGTCTTCTTCAAGCCCGGCG
AGCAGTTCAGGGATCTTGTCGGGAGCGCCTACTACGTCGCCCCGGAGGTGCTCAAGCGGC
GATACGGAGCTGAGGCGGACATATGGAGTGCCGGAGTTATCCTCTACATCCTGCTATCCG
GCGTTCCTCCTTTCTGGGCCGAGAACGAGGATGGCATATTTGATGCTGTTTTGCGAGGTC
ATATTGACTTCGCATCTGATCCCTGGCCTTCCATATCGAATAGCGCAAAAGATTTGGTCA
AGAAGATGCTGCGCCAAGATCCCAAGGAGCGGCTTACTGCTGCTGAAATTTTGAACCATC
CATGGATTAGGGAGGATGGAGAGGCGCCAGACAAGCCAATAGACATTACAGTAATAAGCA
GAATGAAGCAGTTCCGGGCAATGAACAAGCTTAAGAAGGTTGCCTTGAAGGTCGTTGCAG
AGAACTTGTCAGAGGAAGAGATTGTGGGCTTGAAAGAAATGTTCAAATCCCTGGATACTG
ATAACAGTGGGACAATAACGCTGGAAGAACTGAGAGCTGGTTTACCAAAGCTCGGCACCA
AAATCTCTGAATCAGAAATAAGACAGTTGATGGAAGCGGCTGATGTTGATGGAAATGGTA
CCATTGATTATGTTGAATTCATATCAGCAACAATGCACATGAATAGACTAGAGAAAGAGG
ATCACATTTTTAAAGCATTCGAGTATTTCGATAAGGACCATAGCGGGCACATTACAGTTG
ATGAGTTGGAAGAAGCTCTGAAGAAGTATGATATGGGTGATGAAGCAACAATTAAAGAAA
TTATTGCTGAAGTAGATACAGATCATGATGGGAGAATCAACTACCAGGAGTTTGTTGCCA
TGATGAAGAATAATAGCTCTGATATTGTTCCCAATCGGAGGCGCATGTTTTAAGTCTCTC
CTACATTTAATTGAAAAAAAAGGCTTCTAAGATATTTCCAGGGTCAGAGAGGAGAGCAAC
TACTACTCTGAAGTGGAACTCAGCCAGGCATCTGTGCAATGATATTCCATACTTGGACAA
GTTACCAATCATGGTTTACTGCCTTTGTGTGCCCATCTACATGGATGGTAGGAGGTTCTT
TCTGGTGCTTCCATGTTCTACCATCTCATCTTACGATTTTTCCATGTATCCTTAATGAGG
CGTGCCTTATGGTCTAATGTTTCCTTCCTACTGGATCTTTTATGTAAGAAATGGGCTTCT
AAAACAGTTCCAAATTATCATATAGTATCAGGCAAAAAGTAATGCACTAATGCGATGTGC
CTTCTGATCCTCTCTCTCTCTTTTTCTTTTCTTTTTGGTCACTGGATCATATATGTGAGA
GACCTGGCTTTGTATGACGGTCCCTGATGACGATACCAGACAAGATTATACTTTGTAACG
AACATAGCTCGACTTTTAATTTCCATTTCCTACAGTAAAAAGTACTGGAATCATAATGTG
TCATACTTAAAATAGCTCAACTTCCAAATATTTAAGTCTTCTAGTGACCAAATTCGTTGC
TGTAGAGTAGTTCGAATGGCAGAAAGCTGATAGCTGGTACAGGACACCCACTTCACATGT
TCACATGAGCAGGTTTGAACACTTTCGGCGCTTTCTCCAATTAACACAGGAGCACATTGT
AATTGCCCACTGTCTAAAAGGCATGTACATATCTTGAAATGGGCAGGCATTCATCAGCCA
AACGCAACTGCTCTTGCAGAATAGAAAATCATCCC