Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES20001
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:57971301:57976036:-1 gene:SORBI_3009G243500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGCTGAGGCTAAAAGGTCTCACCTTCCTTCTCCTCCTCGTCCTCTGCTCCAGCGTT
CATCAATGCGAGGCGAGGAGCGGCAAGAATTGGAGTTGGAGGCGAAGCAGCAGCAGAGCA
CCGTCCACCTCCGCGTTCAGGAGAAAAGGGAAAGCAAAGAGCAGCAGCAGCGGTTCCCAC
AAGCAGAGCGGCAAAGGGAGTCGTCAGAGTCCATACCAGCCCAGCCCGGCCATCACACCT
GCTAGCCCGAGCGGCGACCCTGTGCAGGGCAATGGAAGCCAGGCGGCTCCCGCTCCAGCA
ATGCCAGCACCTAACGGCGGCGGGTATGGATACCCATTGCTGACTCCGCCGCCGTTGCAG
CCCTCACCATCGGCAACTTCACCACCAGCAGCGCCATCATCACAGGATACAGTCTTCAAC
GTGGTGGACTTTGGAGCTAAGGGTGATGGAGTTACTGATGATACTCAGGCCTTTGAAGCA
GCATGGGCAGCAGCATGCAAGGTGGAGGCATCTACAGTTCTCGTACCATCTGAACATGAG
TTTGTTGTGGGCCCAATCTCATTCTCTGGGCCTTACTGTAAACCAAATATTCTATTCCAG
CTAGATGGAACTATTTTAGCTCAAACCAGTGCAAGAGTGTGGGGTTCCGGTTTGCTTCAA
TGGCTTGAGTTCACAAAGCTAACTGGAATAGCAATCCAAGGCAGTGGTGTCATAAATGGT
AGGGGGCAACAATGGTGGACATATTCAGATCCAAATGATGATGACAACGACGACGCATAC
TATGTGGAGCTCGATAAGATGCCACAGATTAAACCTACGGCACTGAGGTTTTATGGTAGT
TCCAATGTCACGGTAACTGGGATAACGATTGTCAACAGCTCCCAGTGCCATCTCAAGTTC
GATAGCTGTCAAGGAGTCATGGTTCACGACTTGACCATCTCTTCCCCTGAGCATAGTCCC
AACACTGATGGAATACACCTGCAAAACTCCAAAGAAGTCAGCATTCACCACACTAACCTG
GCTTGCGGTGATGACTGTGTTTCCATACAGACAGGATGCAGTGATGTAAACATACATAAC
GTGAACTGCGGACCAGGGCATGGAATCAGCATTGGTGGTCTAGGAAGGTACAACACAAAA
GCATGTGTATCCAACATCACCGTAAGAGATGTGAAAATGTTCAGAACAATGACTGGTGTC
AGAATCAAGACTTGGCAGGGTGGTTCAGGGCTGGTCCAAGGCATAAGGTTCTCAAACATA
CAGGTTTCAGAAGTCCAAACACCGATAATAATAGACCAATTCTACTGCGACAAAACAACG
TGCAGGAACCAGACATCAGCGGTGGCCGTTTCAGGCGTTCAGTACGAGAACATCAGGGGC
ACCTTCACGATCAAACCTGCCCACTTCGCGTGCAGCGACAGCTCGCCTTGTTCGGAGATC
ACTCTCACTGGGATACAACTCAAGCCCCTGCTAGTGCCACAGTACCACCTGTACAACCCC
TTCTGCTGGCAGGCATTTGGAGAGCTCTACACCCCCACCGTGCCCCCCATATCTTGCTTG
CAGATCGGCAAGCCAGCAGGGAACAGCGTGCTGTCTGACGGTGACCTTTGCTGA

Peptide Sequence

PEP ID

EES20001
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:57971301:57976036:-1 gene:SORBI_3009G243500 transcript:EES20001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMLRLKGLTFLLLLVLCSSVHQCEARSGKNWSWRRSSSRAPSTSAFRRKGKAKSSSSGSH
KQSGKGSRQSPYQPSPAITPASPSGDPVQGNGSQAAPAPAMPAPNGGGYGYPLLTPPPLQ
PSPSATSPPAAPSSQDTVFNVVDFGAKGDGVTDDTQAFEAAWAAACKVEASTVLVPSEHE
FVVGPISFSGPYCKPNILFQLDGTILAQTSARVWGSGLLQWLEFTKLTGIAIQGSGVING
RGQQWWTYSDPNDDDNDDAYYVELDKMPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKF
DSCQGVMVHDLTISSPEHSPNTDGIHLQNSKEVSIHHTNLACGDDCVSIQTGCSDVNIHN
VNCGPGHGISIGGLGRYNTKACVSNITVRDVKMFRTMTGVRIKTWQGGSGLVQGIRFSNI
QVSEVQTPIIIDQFYCDKTTCRNQTSAVAVSGVQYENIRGTFTIKPAHFACSDSSPCSEI
TLTGIQLKPLLVPQYHLYNPFCWQAFGELYTPTVPPISCLQIGKPAGNSVLSDGDLC

Transcript Sequence

Transcript ID

EES20001
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:57971301:57976036:-1 gene:SORBI_3009G243500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGACAAAGACCACACCTTCAATTCTCTGTGCTGCTGCTGTTACGAGCCAATGCTCCCCAC
ACACAGATGCACGTGACTACGTGAGCCGGGACGCCTGGTCCCTCCCAAGGCCATTTCCTT
CTTTCACTCACCCTTGCTGAAGCCTGAAGAAGGGAGGGACGACGAAGGCCATGAAGTGAA
GCTCTCGTTATTTAAACACCCCTCTCTTTCCCTCCTCAAACACAAAACCACATACTCTGG
ATATCACCTTGCCTTCCTTCCACACATATACACACACATACAGACATACACTCTGAAACG
CAAAGATGATGCTGAGGCTAAAAGGTCTCACCTTCCTTCTCCTCCTCGTCCTCTGCTCCA
GCGTTCATCAATGCGAGGCGAGGAGCGGCAAGAATTGGAGTTGGAGGCGAAGCAGCAGCA
GAGCACCGTCCACCTCCGCGTTCAGGAGAAAAGGGAAAGCAAAGAGCAGCAGCAGCGGTT
CCCACAAGCAGAGCGGCAAAGGGAGTCGTCAGAGTCCATACCAGCCCAGCCCGGCCATCA
CACCTGCTAGCCCGAGCGGCGACCCTGTGCAGGGCAATGGAAGCCAGGCGGCTCCCGCTC
CAGCAATGCCAGCACCTAACGGCGGCGGGTATGGATACCCATTGCTGACTCCGCCGCCGT
TGCAGCCCTCACCATCGGCAACTTCACCACCAGCAGCGCCATCATCACAGGATACAGTCT
TCAACGTGGTGGACTTTGGAGCTAAGGGTGATGGAGTTACTGATGATACTCAGGCCTTTG
AAGCAGCATGGGCAGCAGCATGCAAGGTGGAGGCATCTACAGTTCTCGTACCATCTGAAC
ATGAGTTTGTTGTGGGCCCAATCTCATTCTCTGGGCCTTACTGTAAACCAAATATTCTAT
TCCAGCTAGATGGAACTATTTTAGCTCAAACCAGTGCAAGAGTGTGGGGTTCCGGTTTGC
TTCAATGGCTTGAGTTCACAAAGCTAACTGGAATAGCAATCCAAGGCAGTGGTGTCATAA
ATGGTAGGGGGCAACAATGGTGGACATATTCAGATCCAAATGATGATGACAACGACGACG
CATACTATGTGGAGCTCGATAAGATGCCACAGATTAAACCTACGGCACTGAGGTTTTATG
GTAGTTCCAATGTCACGGTAACTGGGATAACGATTGTCAACAGCTCCCAGTGCCATCTCA
AGTTCGATAGCTGTCAAGGAGTCATGGTTCACGACTTGACCATCTCTTCCCCTGAGCATA
GTCCCAACACTGATGGAATACACCTGCAAAACTCCAAAGAAGTCAGCATTCACCACACTA
ACCTGGCTTGCGGTGATGACTGTGTTTCCATACAGACAGGATGCAGTGATGTAAACATAC
ATAACGTGAACTGCGGACCAGGGCATGGAATCAGCATTGGTGGTCTAGGAAGGTACAACA
CAAAAGCATGTGTATCCAACATCACCGTAAGAGATGTGAAAATGTTCAGAACAATGACTG
GTGTCAGAATCAAGACTTGGCAGGGTGGTTCAGGGCTGGTCCAAGGCATAAGGTTCTCAA
ACATACAGGTTTCAGAAGTCCAAACACCGATAATAATAGACCAATTCTACTGCGACAAAA
CAACGTGCAGGAACCAGACATCAGCGGTGGCCGTTTCAGGCGTTCAGTACGAGAACATCA
GGGGCACCTTCACGATCAAACCTGCCCACTTCGCGTGCAGCGACAGCTCGCCTTGTTCGG
AGATCACTCTCACTGGGATACAACTCAAGCCCCTGCTAGTGCCACAGTACCACCTGTACA
ACCCCTTCTGCTGGCAGGCATTTGGAGAGCTCTACACCCCCACCGTGCCCCCCATATCTT
GCTTGCAGATCGGCAAGCCAGCAGGGAACAGCGTGCTGTCTGACGGTGACCTTTGCTGAA
ACGCCAATCCAGGAATTAGTGTTACTGCTTGTGTTCATCAGTTAAGGCGGTCGTCGTGAT
TCTTCCGACCCCTTTGCGTGATGCTGTGTAACTGTGCATAGTGCATATATGCAGCTAGTG
TCAGGAATCAGGATGTGGTTTCCATGGCACAAAACCAACTCCCCTCTCCTCTTGATAGGA
AAGGTAGTGTTTGCACAGTGTCTCCATTTTCCAGTGATGCATCCTGTATGGGGATACTTC
AGGGTAAGAGTGGCATAGGACGAGTCGTCTGTAAACAAATAACTACGGAGTAATAGTAAG
TAGCAAAGCATGTTCGCTCTTCAGATGTACTAGCTATCGCTGGGTGACAGATCCAGCTAT
CCATTGTTCCGTACGGGGTCAGAGTGGCAACTCAGGAGTGAACTGAACATAAACCTAAAC
CCACTTTCACTTGATGCATGGGTGCAACGTTTCATGCTGAGGAATCTAGAGCAACCGCAG
CGGGAGAGGAAGCTAACCGGTGGCGAAGCTGAGATCATCGGCGGTGTAGCAGAACACCGG
TGGATGACCATGGGAAGAAGCCGAGGAGCGTGGAGACCGGCCCGGCGCCGGCGCCGGCGC
CGCCGCGGGAGGCATTGCGCCGAGAGCCCGAGATGTTTCCTTACCACCTAGGCAACCGCC
GGCCACGCGACCACGCGTCGGACGCCGACTCAAAGGTGCTCGACGAAATGCGTAGGCGCG
CGGCGGAGCGGCGGAGGAATCGCGAT