Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES19987
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:57810429:57812688:-1 gene:SORBI_3009G241000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGACGAGCCAAGAACGACGGCGGCGGCGACGCCGAGCAGCAGGATGCCGGACTTC
AAGCAGTCGGTGAAGCTCAAGTACGTGAAGCTTGGGTACCACCACCTGATCAGCCACGGC
GCGTACCTGCTGCTGGCGCCGCTGCCGGGGCTGGTGGCGGCGCACCTGTCCACCTTCACG
CTGCGTGACCTGGCGGACCTGTGGCAGAGCCTGCAGTACAACCTGGTGTCCGTGCTCGTC
TGCACCACGGTGCTGGTGGTGGTGGCCACGGCCTACGCGCTGACGCGGCCGCGGCCCGTG
TACCTGGTGGACTTCGCGTGCTACAAGCCCGACGACGAGCGCAAGTGCAGCCGCGCGCGG
TTCATGAACTGCACCGAGTCGCTGGGCACCTTCACGCCGGAGAACATCGAGTTCCAGCGC
CGGATCATCGAGCGGTCGGGGCTCGGCGAGGACACGTACCTCCCGGAGGCGGTGCTCAAC
ATCCCGCCCAACCCGTCCATGGCCAACGCGCGGAAGGAGGCCGAGATGGTCATGTTCGGC
GCGCTGGACGAGCTGTTCGCCAAGACGGGCGTGCGGCCCAAGGACGTGGGCGTGCTGGTG
GTGAACTGCAGCCTCTTCAACCCGACGCCGTCGCTGTCCGCCATGGTCGTCAACCACTAC
AAGCTCCGGGGCAACATCGCGAGCTACAACCTCGGCGGGATGGGCTGCAGCGCGGGGCTC
ATCGCCGTCGACCTCGCCAGGGACCTGCTGCAGTGCCACCGGGACACGTACGCCGTGGTG
ATCAGCATGGAGAACATCACCCTCAACTGGTACTTCGGCAACGACCGCTCCATGCTGGTG
TCCAACTGCCTGTTCCGCATGGGCGGCGCCGCGCTCCTGCTGTCGAACCGCGGCTCGGCG
CGGCGACGGTCCAAGTACCAGCTGGTGCACACGGTGCGCACGCACAGGGCCGCCGACGAC
CGCTGCTTCGGCTGCGTGTGGCAGCGGGAGGACGGGGAGGGGAAAGTGGGCGTGTCGCTG
TCCAAGGAGCTCATGGCCGTGGCCGGGGACGCGCTCAAGACCAACATCACGACGCTCGGC
CCGCTCGTGCTGCCCATGTCGGAGCAGCTGCTCTTCTTCGCCACGCTCGTCGCGCGCAAG
GTGCTGAAGCGCAAGGTGAAGCCCTACATCCCGGACTTCAAGCTGGCGTTCGAGCACTTC
TGCATCCACGCGGGCGGGCGGGCGGTGCTGGACGAGCTGGAGAAGAACCTCAAGCTCACG
GACTGGCACATGGAGCCGTCCAGGATGACGCTGCACCGGTTCGGCAACACCTCCAGCAGC
TCGCTCTGGTACGAGCTCGCCTACGCCGAGGCCAAGGGACGGATCAAGAAGGGCGACCGC
ACCTGGCAGATCGCCTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAAGGCGCTC
CGGTCGGTGAACCCAGCCAAGGAGAAAGGCATGAGGAACAACCCCTGGAGGGACGACATC
GACAGGTACCCCGTCGCCGTCCCCAAGGTGTCAGCTATCTGA

Peptide Sequence

PEP ID

EES19987
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:57810429:57812688:-1 gene:SORBI_3009G241000 transcript:EES19987 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADEPRTTAAATPSSRMPDFKQSVKLKYVKLGYHHLISHGAYLLLAPLPGLVAAHLSTFT
LRDLADLWQSLQYNLVSVLVCTTVLVVVATAYALTRPRPVYLVDFACYKPDDERKCSRAR
FMNCTESLGTFTPENIEFQRRIIERSGLGEDTYLPEAVLNIPPNPSMANARKEAEMVMFG
ALDELFAKTGVRPKDVGVLVVNCSLFNPTPSLSAMVVNHYKLRGNIASYNLGGMGCSAGL
IAVDLARDLLQCHRDTYAVVISMENITLNWYFGNDRSMLVSNCLFRMGGAALLLSNRGSA
RRRSKYQLVHTVRTHRAADDRCFGCVWQREDGEGKVGVSLSKELMAVAGDALKTNITTLG
PLVLPMSEQLLFFATLVARKVLKRKVKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLT
DWHMEPSRMTLHRFGNTSSSSLWYELAYAEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL
RSVNPAKEKGMRNNPWRDDIDRYPVAVPKVSAI

Transcript Sequence

Transcript ID

EES19987
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:57810429:57812688:-1 gene:SORBI_3009G241000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGTGGCGTGGCGTATCTTTCGGTTTGGATCTCCGAGACCGATCAGGGAGTAGGTGGGAGC
CGGCCTCGTCACGGTTAGCTTCCCGTGACATATGCACTGTCCTCTTTTCCGACCGTTGAA
CGCACACCTGATCGAGTTGGTGTCTGGTGGTCTCGGAGTTGTTTACCGGGTCGGAACTCG
ATCAGATCGGTGCCTGCGTGCGTGGCCTCTATATAAACCCACGGCCGCGCGGCCTGACGC
TCCATCGCCTACACGTCGAAACAAGTCGAGAGAGATAGACATCTTGTCACGCTGGTGATC
GGCGATCGTCGTCCGTCCTCGCTCCGTCGCTAGCTGACATGGCCGACGAGCCAAGAACGA
CGGCGGCGGCGACGCCGAGCAGCAGGATGCCGGACTTCAAGCAGTCGGTGAAGCTCAAGT
ACGTGAAGCTTGGGTACCACCACCTGATCAGCCACGGCGCGTACCTGCTGCTGGCGCCGC
TGCCGGGGCTGGTGGCGGCGCACCTGTCCACCTTCACGCTGCGTGACCTGGCGGACCTGT
GGCAGAGCCTGCAGTACAACCTGGTGTCCGTGCTCGTCTGCACCACGGTGCTGGTGGTGG
TGGCCACGGCCTACGCGCTGACGCGGCCGCGGCCCGTGTACCTGGTGGACTTCGCGTGCT
ACAAGCCCGACGACGAGCGCAAGTGCAGCCGCGCGCGGTTCATGAACTGCACCGAGTCGC
TGGGCACCTTCACGCCGGAGAACATCGAGTTCCAGCGCCGGATCATCGAGCGGTCGGGGC
TCGGCGAGGACACGTACCTCCCGGAGGCGGTGCTCAACATCCCGCCCAACCCGTCCATGG
CCAACGCGCGGAAGGAGGCCGAGATGGTCATGTTCGGCGCGCTGGACGAGCTGTTCGCCA
AGACGGGCGTGCGGCCCAAGGACGTGGGCGTGCTGGTGGTGAACTGCAGCCTCTTCAACC
CGACGCCGTCGCTGTCCGCCATGGTCGTCAACCACTACAAGCTCCGGGGCAACATCGCGA
GCTACAACCTCGGCGGGATGGGCTGCAGCGCGGGGCTCATCGCCGTCGACCTCGCCAGGG
ACCTGCTGCAGTGCCACCGGGACACGTACGCCGTGGTGATCAGCATGGAGAACATCACCC
TCAACTGGTACTTCGGCAACGACCGCTCCATGCTGGTGTCCAACTGCCTGTTCCGCATGG
GCGGCGCCGCGCTCCTGCTGTCGAACCGCGGCTCGGCGCGGCGACGGTCCAAGTACCAGC
TGGTGCACACGGTGCGCACGCACAGGGCCGCCGACGACCGCTGCTTCGGCTGCGTGTGGC
AGCGGGAGGACGGGGAGGGGAAAGTGGGCGTGTCGCTGTCCAAGGAGCTCATGGCCGTGG
CCGGGGACGCGCTCAAGACCAACATCACGACGCTCGGCCCGCTCGTGCTGCCCATGTCGG
AGCAGCTGCTCTTCTTCGCCACGCTCGTCGCGCGCAAGGTGCTGAAGCGCAAGGTGAAGC
CCTACATCCCGGACTTCAAGCTGGCGTTCGAGCACTTCTGCATCCACGCGGGCGGGCGGG
CGGTGCTGGACGAGCTGGAGAAGAACCTCAAGCTCACGGACTGGCACATGGAGCCGTCCA
GGATGACGCTGCACCGGTTCGGCAACACCTCCAGCAGCTCGCTCTGGTACGAGCTCGCCT
ACGCCGAGGCCAAGGGACGGATCAAGAAGGGCGACCGCACCTGGCAGATCGCCTTCGGCT
CCGGGTTCAAGTGCAACAGCGCCGTGTGGAAGGCGCTCCGGTCGGTGAACCCAGCCAAGG
AGAAAGGCATGAGGAACAACCCCTGGAGGGACGACATCGACAGGTACCCCGTCGCCGTCC
CCAAGGTGTCAGCTATCTGATGACTGATTTGCAGCCCGCAGGCATCGCCAATTCGCCATT
GCCATGCCTGTGTCTGTCTTTTGATCCAATCCATCGGATTATTGTAGCAAAAGCCGTAGT
AGAATCAATGTACACTAGGAGTGGAGTCGATCGTTTTGTGTTACATACGTACAATTGTGA
ATCGGCCGCCGGTCTGCTAGCTGTTACATATACATGATGTGTATATAAAAGTATAGACGT
AAAGTGCGTGCATGCTTGCTTGCTTGATAGGGGAATATACTGTAATACGAGAGCTGCAAG
CCTGTGCGGCCTCACTGCAGAACAGCCACGTGCTTGAGATTTCTGTGACTGTGCATTCAA
GACAAGAACAAGGAATATCGTTTCAGCAACCAACACCTGT