Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES19981
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:57760417:57763893:-1 gene:SORBI_3009G239900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCTCCACCCTCGCGTTCGGCCACCCCAAAACCCTAGGCGCCGCCGCCGCATCC
GCCGGTGCGAAGGCCCTCCCGACCTCCTCGTCCGTCTCCTTCCCGGCCACCCAGCAGCCC
GCGTGCCACCTCTCCTCGTCCGCGTCCGCGTCCGCGCACGGGGCCCGCCGCCGGGACGTC
GCCGCCATGGTCTACGCGCCGCCGGCCGTCGGCACCGCCATGCCGTCGCTCGACTTCGAC
ACCTCCGTCTTCAACAAGGAGAAGGTCTCCCTCGCCGGCCACGAGGAGTACATCGTGCGC
GGCGGGAGGAACCTGTTCCCGCTGCTCCCGGAGGCGTTCAAGGGGGTCAAGCAGATCGGA
GTCATTGGATGGGGCTCGCAGGGACCTGCCCAAGCTCAGAACCTGAGAGATTCACTGGCT
GAAGCAAAGTCAGACATTGTTGTGAAGATTGGTCTACGGAAAGGATCCAAATCTTTTGAG
GAAGCACGTGCTGCTGGATTCACCGAAGAGAGTGGAACCTTGGGCGATATTTGGGAAACT
GTCTCCGACAGCGATCTTGTGTTGCTGCTGATTTCTGATGCTGCACAGGCTGACAACTAT
GAGAAGATCTTCTCTCACATGAAACCAAACAGTATCCTTGGTTTATCTCATGGATTTCTT
CTGGGACATTTGCAATCACTTGGACTTGATTTCCCAAAGAACATCAGTGTGATTGCTGTA
TGCCCCAAGGGAATGGGTCCATCTGTCCGCAGGCTTTATGTTCAGGGCAAGGAAGTCAAT
GGTGCTGGCATCAACTCTAGCTTTGCTGTGCACCAGGATGTTGATGGAAGGGCAACTGAT
GTTGCTCTAGCATGGTCAGTTGCACTTGGCTCCCCCTTTACATTTGCTACTACTTTAGAA
CAGGAGTACAAGAGTGATATCTTTGGAGAGCGAGGCATTTTGCTGGGTGCGGTCCATGGT
ATCGTGGAGGCTCTGTTTAGGAGATACACAGAGCAAGGAATGGATGAAGAGTCAGCCTAC
AAAAACACTGTTGAGGGCATAACTGGGATCATCTCGAAAACCATCTCAAAGAAGGGGATG
CTTGAAGTGTACAACTCATTGAGTGAGGAAGGCAAAAAGGAGTTCAACAAGGCTTACAGT
GCATCGTTTTACCCGTGCATGGATATACTCTACGAATGCTATGAAGATGTGGCCTCTGGA
AGTGAAATCCGGAGTGTGGTGTTGGCTGGGCGGAGGTTTTACGAAAAAGAGGGCCTCCCA
GCTTTTCCAATGGGCAACATTGACCAAACTCGCATGTGGAAGGTTGGTGAAAAGGTGCGC
GCAACCCGTCCAGAAGGTGATCTTGGCCCGCTCCATGCCTTCACTGCTGGAGTGTACATT
GCCTTGATGATGGCGCAGATTGAGATCTTGAGGAAGAAGGGGCACTCCTACTCTGAGATC
ATCAACGAGAGCGTGATCGAGTCAGTGGACTCGCTGAACCCGTTCATGCACGCCCGTGGG
GTCGCCTTCATGGTGGACAACTGCTCCACGACGGCTCGCCTGGGATCCAGGAAGTGGGCA
CCACGCTTCGACTACATCCTGACGCAGCAGGCCTTCGTGACGGTGGACAAGGACGCCCCC
ATCAACCAGGACCTCATCAGCAACTTCTTGTCAGACCCTGTCCATGGCGCCATCGAGGTC
TGCGCGGAGCTGAGGCCCACCGTCGACATCTCCGTGACTGCCAACGCCGACTTTGTGCGC
CCAGAGCTCCGACAATCTTCCTAG

Peptide Sequence

PEP ID

EES19981
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:57760417:57763893:-1 gene:SORBI_3009G239900 transcript:EES19981 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASTLAFGHPKTLGAAAASAGAKALPTSSSVSFPATQQPACHLSSSASASAHGARRRDV
AAMVYAPPAVGTAMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGVKQIG
VIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFEEARAAGFTEESGTLGDIWET
VSDSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAV
CPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVALAWSVALGSPFTFATTLE
QEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEESAYKNTVEGITGIISKTISKKGM
LEVYNSLSEEGKKEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLP
AFPMGNIDQTRMWKVGEKVRATRPEGDLGPLHAFTAGVYIALMMAQIEILRKKGHSYSEI
INESVIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAP
INQDLISNFLSDPVHGAIEVCAELRPTVDISVTANADFVRPELRQSS

Transcript Sequence

Transcript ID

EES19981
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:57760417:57763893:-1 gene:SORBI_3009G239900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCAGTCACACACGGACAGTTCCCACCCCCACCACACCAACCGCTCGCCACCCGCCTCGC
CGTCCTCGTTCGCAGCTGTCCTGCACTGCAATCGGCTACATGGCGGCCTCCACCCTCGCG
TTCGGCCACCCCAAAACCCTAGGCGCCGCCGCCGCATCCGCCGGTGCGAAGGCCCTCCCG
ACCTCCTCGTCCGTCTCCTTCCCGGCCACCCAGCAGCCCGCGTGCCACCTCTCCTCGTCC
GCGTCCGCGTCCGCGCACGGGGCCCGCCGCCGGGACGTCGCCGCCATGGTCTACGCGCCG
CCGGCCGTCGGCACCGCCATGCCGTCGCTCGACTTCGACACCTCCGTCTTCAACAAGGAG
AAGGTCTCCCTCGCCGGCCACGAGGAGTACATCGTGCGCGGCGGGAGGAACCTGTTCCCG
CTGCTCCCGGAGGCGTTCAAGGGGGTCAAGCAGATCGGAGTCATTGGATGGGGCTCGCAG
GGACCTGCCCAAGCTCAGAACCTGAGAGATTCACTGGCTGAAGCAAAGTCAGACATTGTT
GTGAAGATTGGTCTACGGAAAGGATCCAAATCTTTTGAGGAAGCACGTGCTGCTGGATTC
ACCGAAGAGAGTGGAACCTTGGGCGATATTTGGGAAACTGTCTCCGACAGCGATCTTGTG
TTGCTGCTGATTTCTGATGCTGCACAGGCTGACAACTATGAGAAGATCTTCTCTCACATG
AAACCAAACAGTATCCTTGGTTTATCTCATGGATTTCTTCTGGGACATTTGCAATCACTT
GGACTTGATTTCCCAAAGAACATCAGTGTGATTGCTGTATGCCCCAAGGGAATGGGTCCA
TCTGTCCGCAGGCTTTATGTTCAGGGCAAGGAAGTCAATGGTGCTGGCATCAACTCTAGC
TTTGCTGTGCACCAGGATGTTGATGGAAGGGCAACTGATGTTGCTCTAGCATGGTCAGTT
GCACTTGGCTCCCCCTTTACATTTGCTACTACTTTAGAACAGGAGTACAAGAGTGATATC
TTTGGAGAGCGAGGCATTTTGCTGGGTGCGGTCCATGGTATCGTGGAGGCTCTGTTTAGG
AGATACACAGAGCAAGGAATGGATGAAGAGTCAGCCTACAAAAACACTGTTGAGGGCATA
ACTGGGATCATCTCGAAAACCATCTCAAAGAAGGGGATGCTTGAAGTGTACAACTCATTG
AGTGAGGAAGGCAAAAAGGAGTTCAACAAGGCTTACAGTGCATCGTTTTACCCGTGCATG
GATATACTCTACGAATGCTATGAAGATGTGGCCTCTGGAAGTGAAATCCGGAGTGTGGTG
TTGGCTGGGCGGAGGTTTTACGAAAAAGAGGGCCTCCCAGCTTTTCCAATGGGCAACATT
GACCAAACTCGCATGTGGAAGGTTGGTGAAAAGGTGCGCGCAACCCGTCCAGAAGGTGAT
CTTGGCCCGCTCCATGCCTTCACTGCTGGAGTGTACATTGCCTTGATGATGGCGCAGATT
GAGATCTTGAGGAAGAAGGGGCACTCCTACTCTGAGATCATCAACGAGAGCGTGATCGAG
TCAGTGGACTCGCTGAACCCGTTCATGCACGCCCGTGGGGTCGCCTTCATGGTGGACAAC
TGCTCCACGACGGCTCGCCTGGGATCCAGGAAGTGGGCACCACGCTTCGACTACATCCTG
ACGCAGCAGGCCTTCGTGACGGTGGACAAGGACGCCCCCATCAACCAGGACCTCATCAGC
AACTTCTTGTCAGACCCTGTCCATGGCGCCATCGAGGTCTGCGCGGAGCTGAGGCCCACC
GTCGACATCTCCGTGACTGCCAACGCCGACTTTGTGCGCCCAGAGCTCCGACAATCTTCC
TAGATTGAGGCAGTGAGCAGAGAGAGTGAGAGGGAGGGAGAGGAAGAGAGGATTTCGTGT
CCAGAGTTAGAACAGAGTTGTATGTTGTGCGACTGCTTTGTAAGTCTGAACTGAACCTAT
GTGAGCTTCTATCAGAGGACCTGAGAAAGCTTGGGCATCTGTTTTTGGAATAAAATGGGC
CCTTATATGGAATAGCTTGGGAGGGTATGTGCATGTGCGAAAGTATGATAAACAGGTGGT
CTCTCTTCCCATTGGTT