Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES19921
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:56796639:56803516:-1 gene:SORBI_3009G226400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATAACTTGATCACCCTCGTCAACAAGCTGCAGAGGGCATGCACGGCTCTCGGAGAC
CACGGAGAGGAGAGCGCCCTCCCGACGCTCTGGGATTCGCTGCCGGCCATCGCCGTCGTT
GGAGGACAGAGCTCTGGTAAATCCTCTGTGTTGGAGAGCGTGGTTGGGAAGGATTTCCTA
CCGAGGGGTTCAGGCATTGTAACCCGGCGGCCGCTGGTGCTGCAGCTCCACAGAATTGAT
GGCGACAGGGAATATGCTGAGTTTATGCACCTTCCGAGAAAGAGATTTACAGATTTTGCT
GCTGTGAGGAAGGAGATAGCTGATGAAACTGACAGAGAAACAGGACGTTCAAAGCAAATA
TCGACTGTCCCTATCCATTTAAGCATATTTTCTCCACATGTTGTGAATCTTACTCTTATT
GATCTTCCTGGGCTTACTAAAGTAGCAGTTGAGGGCCAACCGGAAAGTATTGTTCAGGAC
ATTGAAAACATGGTTCGCTCATATATTGAAAAGCCAAATTGTATCATTCTGGCTGTTTCC
CCAGCCAATCAGGACCTTGCTACTTCTGATGCAATCAAGATTTCACGGGAAGTTGATCCC
AAAGGTGAAAGGACCTTTGGTGTGCTTACAAAAATTGATCTGATGGACAAGGGTACCGAT
GCTGTTGATATACTGGAAGGAAGAGCTTACCGTCTCCAAACACCGTGGGTTGGTGTTGTT
AATCGATCCCAACAAGATATCAACAAGAATGTGGACATGATTGCTGCTAGGCGTAGAGAG
CGAGAGTATTTTGCAACTACACCAGAATATAAGCACATGGCTTCTAGGATGGGATCTGAA
TATTTAGGAAAGATGCTTTCAAAGCATCTGGAACAAGTGATCAAATCAAGGATCCCAGGG
CTCCAATCTCTTATAACAAAGACAATTGCAGAGCTGGAAACTGAACTTAATCGACTTGGA
AAACCCATTGCTAATGATGCTGGGGGGAAGCTGTACACAATCATGGAAATATGTCGTATG
TTTGACAGTATCTACAAAGAGCATCTGGATGGAGTGCGTCCTGGTGGAGAGAAAGTTTAC
CATGTCTTCGACAATCAATTTCCTGTTGCTATTAAACGATTGCAATTTGATAAACAACTC
TCTATGGAAAATGTGAGGAAGCTTATAACAGAAGCTGATGGATACCAGCCTCACTTGATA
GCTCCAGAACAAGGATATCGACGCCTTATAGAATCTTGTCTTATTAGTATCAGAGGTCCT
GCTGAGGCAGCTGTTGATGCGGTCCATGCAATTCTGAAGGACCTTGTCCGCAAGGCTATC
AATGAAACACATGAGCTGAAGCAGTTTCCCACCCTTCGTGTGGAAGTAGGCAATGCGGCT
TTTGAGTCATTGGATAGAATGAGGGATGAAAGCAAGAAAAATACATTAAAGCTAGTTGAC
ATGGAATGCAGCTACTTGACAGTAGATTTCTTCAGGAAGCTTCCTCAGGATGTTGAGAAG
GGTGGAAATCCAAGCCACTCTATTTTTGATAGATATAATGACTCTTATCTTAGACGAATT
GGACAAACTGTTCTGTCATATGTTAATATGGTGTGTTCGACCTTGAGGAACTCCATCCCA
AAATCTATCGTTTATTGCCAAGTGCGAGAGGCCAAGCGCTCGCTGCTCGATCACTTCTTC
ACTGAACTGGGAGCAAGAGAGATGAAGCAACTTTCCAAACTTCTCGATGAAGACCCAGCA
GTCATGGAACGGAGAACAAACCTTGCAAAGAGGCTGGAGCTGTACCGGAGTGCCCAATCA
GAAATCGATGCAGTTGCGTGGTCCAAATAG

Peptide Sequence

PEP ID

EES19921
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:56796639:56803516:-1 gene:SORBI_3009G226400 transcript:EES19921 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDNLITLVNKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFL
PRGSGIVTRRPLVLQLHRIDGDREYAEFMHLPRKRFTDFAAVRKEIADETDRETGRSKQI
STVPIHLSIFSPHVVNLTLIDLPGLTKVAVEGQPESIVQDIENMVRSYIEKPNCIILAVS
PANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVDILEGRAYRLQTPWVGVV
NRSQQDINKNVDMIAARRREREYFATTPEYKHMASRMGSEYLGKMLSKHLEQVIKSRIPG
LQSLITKTIAELETELNRLGKPIANDAGGKLYTIMEICRMFDSIYKEHLDGVRPGGEKVY
HVFDNQFPVAIKRLQFDKQLSMENVRKLITEADGYQPHLIAPEQGYRRLIESCLISIRGP
AEAAVDAVHAILKDLVRKAINETHELKQFPTLRVEVGNAAFESLDRMRDESKKNTLKLVD
MECSYLTVDFFRKLPQDVEKGGNPSHSIFDRYNDSYLRRIGQTVLSYVNMVCSTLRNSIP
KSIVYCQVREAKRSLLDHFFTELGAREMKQLSKLLDEDPAVMERRTNLAKRLELYRSAQS
EIDAVAWSK

Transcript Sequence

Transcript ID

EES19921
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:56796639:56803516:-1 gene:SORBI_3009G226400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCATTTCTTCTCCACGAAGCCTTTCAAAACCCAAATCACGCCTCCAAACAGCATCGCTTC
CCTGCACATCTCCACCAGGCCACAGCTCGAGCCCAACGACCGACGCCTAGACGCGGCTGG
GCGGTCGGTCTCACCTCGTCTCCCCTCCGCGCCTCCCTTCTTCCTGCTCCGCGTCTCGAT
CTCTCCCCTCCCCCGCCGCGTTGCTCGACCCGCTCAGATCTCGCCCACCCTGCGCTGCGG
CCATGGATAACTTGATCACCCTCGTCAACAAGCTGCAGAGGGCATGCACGGCTCTCGGAG
ACCACGGAGAGGAGAGCGCCCTCCCGACGCTCTGGGATTCGCTGCCGGCCATCGCCGTCG
TTGGAGGACAGAGCTCTGGTAAATCCTCTGTGTTGGAGAGCGTGGTTGGGAAGGATTTCC
TACCGAGGGGTTCAGGCATTGTAACCCGGCGGCCGCTGGTGCTGCAGCTCCACAGAATTG
ATGGCGACAGGGAATATGCTGAGTTTATGCACCTTCCGAGAAAGAGATTTACAGATTTTG
CTGCTGTGAGGAAGGAGATAGCTGATGAAACTGACAGAGAAACAGGACGTTCAAAGCAAA
TATCGACTGTCCCTATCCATTTAAGCATATTTTCTCCACATGTTGTGAATCTTACTCTTA
TTGATCTTCCTGGGCTTACTAAAGTAGCAGTTGAGGGCCAACCGGAAAGTATTGTTCAGG
ACATTGAAAACATGGTTCGCTCATATATTGAAAAGCCAAATTGTATCATTCTGGCTGTTT
CCCCAGCCAATCAGGACCTTGCTACTTCTGATGCAATCAAGATTTCACGGGAAGTTGATC
CCAAAGGTGAAAGGACCTTTGGTGTGCTTACAAAAATTGATCTGATGGACAAGGGTACCG
ATGCTGTTGATATACTGGAAGGAAGAGCTTACCGTCTCCAAACACCGTGGGTTGGTGTTG
TTAATCGATCCCAACAAGATATCAACAAGAATGTGGACATGATTGCTGCTAGGCGTAGAG
AGCGAGAGTATTTTGCAACTACACCAGAATATAAGCACATGGCTTCTAGGATGGGATCTG
AATATTTAGGAAAGATGCTTTCAAAGCATCTGGAACAAGTGATCAAATCAAGGATCCCAG
GGCTCCAATCTCTTATAACAAAGACAATTGCAGAGCTGGAAACTGAACTTAATCGACTTG
GAAAACCCATTGCTAATGATGCTGGGGGGAAGCTGTACACAATCATGGAAATATGTCGTA
TGTTTGACAGTATCTACAAAGAGCATCTGGATGGAGTGCGTCCTGGTGGAGAGAAAGTTT
ACCATGTCTTCGACAATCAATTTCCTGTTGCTATTAAACGATTGCAATTTGATAAACAAC
TCTCTATGGAAAATGTGAGGAAGCTTATAACAGAAGCTGATGGATACCAGCCTCACTTGA
TAGCTCCAGAACAAGGATATCGACGCCTTATAGAATCTTGTCTTATTAGTATCAGAGGTC
CTGCTGAGGCAGCTGTTGATGCGGTCCATGCAATTCTGAAGGACCTTGTCCGCAAGGCTA
TCAATGAAACACATGAGCTGAAGCAGTTTCCCACCCTTCGTGTGGAAGTAGGCAATGCGG
CTTTTGAGTCATTGGATAGAATGAGGGATGAAAGCAAGAAAAATACATTAAAGCTAGTTG
ACATGGAATGCAGCTACTTGACAGTAGATTTCTTCAGGAAGCTTCCTCAGGATGTTGAGA
AGGGTGGAAATCCAAGCCACTCTATTTTTGATAGATATAATGACTCTTATCTTAGACGAA
TTGGACAAACTGTTCTGTCATATGTTAATATGGTGTGTTCGACCTTGAGGAACTCCATCC
CAAAATCTATCGTTTATTGCCAAGTGCGAGAGGCCAAGCGCTCGCTGCTCGATCACTTCT
TCACTGAACTGGGAGCAAGAGAGATGAAGCAACTTTCCAAACTTCTCGATGAAGACCCAG
CAGTCATGGAACGGAGAACAAACCTTGCAAAGAGGCTGGAGCTGTACCGGAGTGCCCAAT
CAGAAATCGATGCAGTTGCGTGGTCCAAATAGTCCTGATGGCCAAGATATCTGTTCTTAC
ATGTTCTTTACCCCTTGTCTGGCGATTCTCTCTCCTATTCTGGGGCATATATAGCTGATT
TTTCCTGTTCTAGGTCAGGTCATTTTATAGATCACCGCAGCTGTACGGTGTCTTTTGGTT
GTGCTTTTGTTCCTTGTGCTTGAGGATCTAGGGGACACCTGGCTGCTGTACTCTTGTATC
ACGAACAAGTTCATATATTGTGTTTTTGTTACCATGCATTCTTTTGTTCCATCGATGTGC
AGCTAC