Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES19711
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:53220436:53222925:-1 gene:SORBI_3009G177300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACGACGACGCGCGCTGCCGCCGCCGCCGGCGTCCTGCTGCTGGTGCTGTCGGCG
CTGGCCTTGGTGGCGCGGGCCGAGGACCCGTACCTGTTCTTCGAGTGGAAGGTGACGTAC
GGGACCAAGTCCCTGCTGGGCGTGCCCCAGAAGGTCATCCTCATCAACGGCGAGTTCCCC
GGACCCAGGATCAACTGCACCTCCAACAACAACATCGTCATCAACGTCTTCAACCAGCTC
GACCACCCGCTCCTCTTCACCTGGAACGGGATGCAGCACCGGAAGAACTCGTGGATGGAC
GGGATGCCAGGGACGCAGTGCCCGATCTTGCCCAACACCAACTTCATGTACAAGTGGCAG
CCCAAGGACCAGATCGGCAGCTTCTACTACTTCCCGTCCATGGGCATGCAGCGTGCGGTG
GGCGGCTACGGCGGCATCAGCGTGTACAGCCGCCTCCTCATCCCGGTCCCCTTCGACCAG
CCGCCGCCGGAGAACGACCACGTCGTGCTCATCGGCGACTGGTACACCAAGGACCACGAG
GTCCTGGCCCGCCAGCTCGACGCCGGCAAGAGCGTGGGCCGCCCCGCGGGCGTGGTCATC
AACGGCAAGGGCGGCAAGGACCTGGAGTCGGCGCCGCTCTTCACGTTCGACGCCGGCAAG
ACGTACAGGCTCCGCGTCTGCAACACCGGGATCAAGGCGTCGCTCAACTTCCGCATCCAG
GGCCACCACATGACGCTGGTGGAGCTGGAGGGCTCCCACACCCTGCAGGACGTCTACGAC
TCGCTCGACGTCCACGTCGGCCACTGCCTCTCCGTGCTCGTCACCGCCGACCAGAAGCCC
GGCGACTACTACATGGTGGCGTCCACGCGGTTCATCCACGACGCCAAGTCCGCCAGGGCC
GTCGTCCGCTACGCCGGCTCCAGCGCGCCGCCGCCGGCCGAGATGCCCGAGCCGCCGGCG
GGCTGGGCGTGGTCCATCAACCAGGCGAGGTCGATCCGGTGGAACCTGACGTCCAGCGCG
GCGCGGCCCAACCCGCAGGGCTCCTACCACTACGGCCAGATCAACATCACACGCACCATC
AGGGTCATGGTCTCCAGGGGCCACATCGACGGCAAGCTCCGGTACGGCTTCAATGGCGTC
TCCCACAGGGACCCCGAGACCCCCGTGAAGCTCGCCGAGTACTTCAACGTCACCGACGGG
GTGTTCAGCTACAACCAGATGGGCGACGTGCCCCCCGCCGTGAACGGACCCCTCCATGTC
GTCCCCAATGTCATCACCGCCGAGTTCCGCACCTTCATCGAGATCGTCTTCGAGAACCCC
GAGAAGAGCTTGGACTCCATCCACCTCGACGGCTACGCCTTCTTCGGCGTCGGGATGGGG
CCTGGGCAGTGGTCGCCGGAGGCGAGGGTGACGTACAACCTGCTGGACGCGGTGAGCCGG
CACACGATCCAGGTGTACCCGAGGTCATGGACGGCGATTATGCTGACGTTCGACAACGCG
GGCATGTGGAGCGTCCGGTCCAACATCTGGGAGCGCTACTACCTCGGGGAGCAGTTCTAC
ATCAGCGTCATCTCGCCGGAGCACTCGCTGCGCGACGAGTACAACATGCCGGACAACGAC
CTCCGCTGCGGCAAGGTCGTGGGGCTGCCGCTGCCGCCGTCCTACTCCGCCGCGCGCTAA

Peptide Sequence

PEP ID

EES19711
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:53220436:53222925:-1 gene:SORBI_3009G177300 transcript:EES19711 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATTTRAAAAAGVLLLVLSALALVARAEDPYLFFEWKVTYGTKSLLGVPQKVILINGEFP
GPRINCTSNNNIVINVFNQLDHPLLFTWNGMQHRKNSWMDGMPGTQCPILPNTNFMYKWQ
PKDQIGSFYYFPSMGMQRAVGGYGGISVYSRLLIPVPFDQPPPENDHVVLIGDWYTKDHE
VLARQLDAGKSVGRPAGVVINGKGGKDLESAPLFTFDAGKTYRLRVCNTGIKASLNFRIQ
GHHMTLVELEGSHTLQDVYDSLDVHVGHCLSVLVTADQKPGDYYMVASTRFIHDAKSARA
VVRYAGSSAPPPAEMPEPPAGWAWSINQARSIRWNLTSSAARPNPQGSYHYGQINITRTI
RVMVSRGHIDGKLRYGFNGVSHRDPETPVKLAEYFNVTDGVFSYNQMGDVPPAVNGPLHV
VPNVITAEFRTFIEIVFENPEKSLDSIHLDGYAFFGVGMGPGQWSPEARVTYNLLDAVSR
HTIQVYPRSWTAIMLTFDNAGMWSVRSNIWERYYLGEQFYISVISPEHSLRDEYNMPDND
LRCGKVVGLPLPPSYSAAR

Transcript Sequence

Transcript ID

EES19711
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:53220436:53222925:-1 gene:SORBI_3009G177300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTATCCACCGGCCTCCACCTGACCCCTACCACCACCCGGGACGTCTTCCATGGCCTCCTC
GTAGAATAGCTCTATCTCACCCGCAACAAACTCCTCATTACATCCTTCAAGAGAGAGCCG
CACCACCACCACACTAGAGCATAGCGCCCCGGCCCGGCCGCCGCCGCCGCGCGCCGCGCG
AGAGCTAGCTGCTGCTGATCGATTGGTACAGGCACGTGCGTGCGTGCTCGATCGGGTGGA
GCAACAAGCGAGGAGAGACATGGCGACGACGACGCGCGCTGCCGCCGCCGCCGGCGTCCT
GCTGCTGGTGCTGTCGGCGCTGGCCTTGGTGGCGCGGGCCGAGGACCCGTACCTGTTCTT
CGAGTGGAAGGTGACGTACGGGACCAAGTCCCTGCTGGGCGTGCCCCAGAAGGTCATCCT
CATCAACGGCGAGTTCCCCGGACCCAGGATCAACTGCACCTCCAACAACAACATCGTCAT
CAACGTCTTCAACCAGCTCGACCACCCGCTCCTCTTCACCTGGAACGGGATGCAGCACCG
GAAGAACTCGTGGATGGACGGGATGCCAGGGACGCAGTGCCCGATCTTGCCCAACACCAA
CTTCATGTACAAGTGGCAGCCCAAGGACCAGATCGGCAGCTTCTACTACTTCCCGTCCAT
GGGCATGCAGCGTGCGGTGGGCGGCTACGGCGGCATCAGCGTGTACAGCCGCCTCCTCAT
CCCGGTCCCCTTCGACCAGCCGCCGCCGGAGAACGACCACGTCGTGCTCATCGGCGACTG
GTACACCAAGGACCACGAGGTCCTGGCCCGCCAGCTCGACGCCGGCAAGAGCGTGGGCCG
CCCCGCGGGCGTGGTCATCAACGGCAAGGGCGGCAAGGACCTGGAGTCGGCGCCGCTCTT
CACGTTCGACGCCGGCAAGACGTACAGGCTCCGCGTCTGCAACACCGGGATCAAGGCGTC
GCTCAACTTCCGCATCCAGGGCCACCACATGACGCTGGTGGAGCTGGAGGGCTCCCACAC
CCTGCAGGACGTCTACGACTCGCTCGACGTCCACGTCGGCCACTGCCTCTCCGTGCTCGT
CACCGCCGACCAGAAGCCCGGCGACTACTACATGGTGGCGTCCACGCGGTTCATCCACGA
CGCCAAGTCCGCCAGGGCCGTCGTCCGCTACGCCGGCTCCAGCGCGCCGCCGCCGGCCGA
GATGCCCGAGCCGCCGGCGGGCTGGGCGTGGTCCATCAACCAGGCGAGGTCGATCCGGTG
GAACCTGACGTCCAGCGCGGCGCGGCCCAACCCGCAGGGCTCCTACCACTACGGCCAGAT
CAACATCACACGCACCATCAGGGTCATGGTCTCCAGGGGCCACATCGACGGCAAGCTCCG
GTACGGCTTCAATGGCGTCTCCCACAGGGACCCCGAGACCCCCGTGAAGCTCGCCGAGTA
CTTCAACGTCACCGACGGGGTGTTCAGCTACAACCAGATGGGCGACGTGCCCCCCGCCGT
GAACGGACCCCTCCATGTCGTCCCCAATGTCATCACCGCCGAGTTCCGCACCTTCATCGA
GATCGTCTTCGAGAACCCCGAGAAGAGCTTGGACTCCATCCACCTCGACGGCTACGCCTT
CTTCGGCGTCGGGATGGGGCCTGGGCAGTGGTCGCCGGAGGCGAGGGTGACGTACAACCT
GCTGGACGCGGTGAGCCGGCACACGATCCAGGTGTACCCGAGGTCATGGACGGCGATTAT
GCTGACGTTCGACAACGCGGGCATGTGGAGCGTCCGGTCCAACATCTGGGAGCGCTACTA
CCTCGGGGAGCAGTTCTACATCAGCGTCATCTCGCCGGAGCACTCGCTGCGCGACGAGTA
CAACATGCCGGACAACGACCTCCGCTGCGGCAAGGTCGTGGGGCTGCCGCTGCCGCCGTC
CTACTCCGCCGCGCGCTAAAATGACCAAGCAGGCCCCCGGCCCCTCGTGTTCGGATTCCT
GTGTGTTGCTCCTGAGGAATTTCTTTTGCTTTGGCGAAAATAATTAAGTAGCCGGGCCGC
GCGTGCGCCCCTCAGCTCAAACTCAAACTCAAAAGAACAAAGACGAAAGAAGCGTAGGGA
GGGGAAGGGGAACAAGGAACGTCGGCTGGGGTCAGCCGGATGGGAACGAACGCATGAATA
TATCATATATGTAACCTTGATGAGATGCCCTCTGAAATCATTGTAATGGGGTTCTCAGAA
AAAAAAAATCATTGTAATGGGAGTTATATATGACTTTACCTCACCATTTATATCTACACC
AGTGAGCCCTTGCGTATATATGCATCTTCTACCGTGATTACACATTTTG