Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18997
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:3691090:3692696:-1 gene:SORBI_3009G039200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCCCAACTTCAGTGGTGTGTGGAGTGCTTTTAAAATAGATATGGTGAGGTCATTC
ATCGCTAGTCACAACACCAACAACACCTACACAAATGACCCAAACAAGAAGCACAATGAC
ATTGTTGATGAGCTCCAAGCAAGGTTCCCTGGCAAAGAAAGGTATCAGGTAATTCAATTG
TATGTTGACCTTGTAGTTGAGATGAATACAACTCAGAGCAACCAACAAGTTGTGGCAAGC
AAAGCACCTGTGAATGATAACTTTGGGATGTCAACGGAGGATACAAATATGAACAACATG
GAAATGATTCATGGTTATATACTAGATGATGTGCAGACCATGAAGATGGTAGAGGAACTG
CCTCATAGGTTGAATATTGTTCATAAGAAAAAGAGGCAACACCCACCCATAGCTTGGAGT
CATGACGAGCACAAGAATTTCCTCCGTGGCCTAGAAGCGTATGGCCGTGGTAACTGGAAG
AACATATCTAGGTACTTCGTCCCCACAAGGACGCCGAATCAGATCTGTAGCCATGCACAA
AAGTATTTCCACAGGAACGAGTGCACCACTAGGAAACAACGCTTCAGCATCAATGATGTT
AGCCTCTATGATACAGAGCCATGGGTGCAGAAGAACTCTTCTAGTTTGAAGTGTCTCACC
TTCGGCCATAGTGCTTACAACACACATTATTATGACATTGAGGGACAACATGCTGTTTTG
AACAAACTCGCACATCCTAGCCAAGCGAGCAGTACACATGCTGCCACCTGGACTAGAGGT
CAGCATGTACTAGCCGGTTCATCCATAGATCCAACAATGGTGCAGAGTAACGCTCTTGGA
TGGGAGGCGCTCGCCTTCACTAGAGGTGCTAACAACACAAATTACTATGACTTTGACGGA
CAACACAATGCCATGAACAACCTTGCATATGTTGACCCGACGAGCAACAACCATGTAGCC
ACTTGGACAAGAGGTCAACATACAACAACTAATTCTTCTATAGTTCCAGCGATGGTGCAG
AATACTTCTCCTAGCGAGGAGGTGCTTTCCTTCACTGGGAATTCTTACAATACAAACTAC
TATGACTATAGTGGACAAAATGTTGCCTTGAATAGTGGGCAACCATGGTGA

Peptide Sequence

PEP ID

EES18997
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:3691090:3692696:-1 gene:SORBI_3009G039200 transcript:EES18997 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPNFSGVWSAFKIDMVRSFIASHNTNNTYTNDPNKKHNDIVDELQARFPGKERYQVIQL
YVDLVVEMNTTQSNQQVVASKAPVNDNFGMSTEDTNMNNMEMIHGYILDDVQTMKMVEEL
PHRLNIVHKKKRQHPPIAWSHDEHKNFLRGLEAYGRGNWKNISRYFVPTRTPNQICSHAQ
KYFHRNECTTRKQRFSINDVSLYDTEPWVQKNSSSLKCLTFGHSAYNTHYYDIEGQHAVL
NKLAHPSQASSTHAATWTRGQHVLAGSSIDPTMVQSNALGWEALAFTRGANNTNYYDFDG
QHNAMNNLAYVDPTSNNHVATWTRGQHTTTNSSIVPAMVQNTSPSEEVLSFTGNSYNTNY
YDYSGQNVALNSGQPW

Transcript Sequence

Transcript ID

EES18997
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:3691090:3692696:-1 gene:SORBI_3009G039200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGTTTCATCATTGACTTGTTTAGTACTCAACCCTCACTACCCATGGATCCCAACTTCAGT
GGTGTGTGGAGTGCTTTTAAAATAGATATGGTGAGGTCATTCATCGCTAGTCACAACACC
AACAACACCTACACAAATGACCCAAACAAGAAGCACAATGACATTGTTGATGAGCTCCAA
GCAAGGTTCCCTGGCAAAGAAAGGTATCAGGTAATTCAATTGTATGTTGACCTTGTAGTT
GAGATGAATACAACTCAGAGCAACCAACAAGTTGTGGCAAGCAAAGCACCTGTGAATGAT
AACTTTGGGATGTCAACGGAGGATACAAATATGAACAACATGGAAATGATTCATGGTTAT
ATACTAGATGATGTGCAGACCATGAAGATGGTAGAGGAACTGCCTCATAGGTTGAATATT
GTTCATAAGAAAAAGAGGCAACACCCACCCATAGCTTGGAGTCATGACGAGCACAAGAAT
TTCCTCCGTGGCCTAGAAGCGTATGGCCGTGGTAACTGGAAGAACATATCTAGGTACTTC
GTCCCCACAAGGACGCCGAATCAGATCTGTAGCCATGCACAAAAGTATTTCCACAGGAAC
GAGTGCACCACTAGGAAACAACGCTTCAGCATCAATGATGTTAGCCTCTATGATACAGAG
CCATGGGTGCAGAAGAACTCTTCTAGTTTGAAGTGTCTCACCTTCGGCCATAGTGCTTAC
AACACACATTATTATGACATTGAGGGACAACATGCTGTTTTGAACAAACTCGCACATCCT
AGCCAAGCGAGCAGTACACATGCTGCCACCTGGACTAGAGGTCAGCATGTACTAGCCGGT
TCATCCATAGATCCAACAATGGTGCAGAGTAACGCTCTTGGATGGGAGGCGCTCGCCTTC
ACTAGAGGTGCTAACAACACAAATTACTATGACTTTGACGGACAACACAATGCCATGAAC
AACCTTGCATATGTTGACCCGACGAGCAACAACCATGTAGCCACTTGGACAAGAGGTCAA
CATACAACAACTAATTCTTCTATAGTTCCAGCGATGGTGCAGAATACTTCTCCTAGCGAG
GAGGTGCTTTCCTTCACTGGGAATTCTTACAATACAAACTACTATGACTATAGTGGACAA
AATGTTGCCTTGAATAGTGGGCAACCATGGTGAGCAATAACCAAGTTCTTTTATAGTTTT
AGTGATGGCGAGGGTGCCACTAGACAACTTGTATTGGCCATCAATAGGGGAGGCTTCCTT
CATAATCACTGGAGTATATGTTTGCCGGTTATTTTATCATTTAGTGTCAACAGGTGCATG
TAAAACTAGTTGGTTGAAGACAATATATGGTGTCAAGTGCTAGTACTATTTCTGTATGGG
GCTACAAAAAATTTCACTACTAGA