Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18594
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:56020413:56028337:1 gene:SORBI_3009G215500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTTACTGCACTCACTGCGCTGATTACTGTCCCTCCATAAAGGACCCTGACAAAGGA
TACATATGTTGTGGTACATGTGGGAAGGTTCTTGATCAGGAGGTATACACTGAGGAGCCT
ACTTTTGTTAAGGGTAACACAGGGGAGAGTCGCTTAGCTGGAAGTATTCTTGCAAGTATT
GAGTCTGGATATTCGATTTCTCATCAAAGAACCTTAGACAAAGGGAAGGATGAGATTAGA
CAGATTGTCAATAACTTAAATGTCAGTGGTGGAGAAACTATCGTTAGCAAGGCTTATCGC
TTCTATGAGCTAGCTGTTGACCGTAATTTTACCAGGGGCCGTAGAACAACCCATGTTGCA
GCTGCTTGCCTTTACATTGCCTGCAGGCAAACTAAGAAAGCTTATCTTCTTATTGATTTC
TCTGACTATCTCCAAATAAGCGTTTATGTCCTAGGTGCTGTTTTTCTCCAGCTCTGCCAA
GTTTTGCTACTCGCAGATCATCCAGTTGTTCAGAAACTTGTAGATCCCAGCCTTTTCATC
CATCGTTTTACACACCGTTTGCTCGGAAAAAGAGATAATGCTGTCTCAGACACAGCTTTA
CGCATTGTAGCTAGCATGAAGAGAGATTGGATGCAGACTGGGAGGAAGCCAAGTGGATTG
TGTGGTGCAGCATTATACATCGCTGCACTCTCTCATGGGAAAAATTACACCAAGGCAGAT
ATTGTCTCTGTTGTGCATGTGTGTGAGGCCACTCTAACGAAGCGATTGATAGAGTTCGAA
AATACCGATTCTGGCAGCTTAACAATTGAAGAATTTCTGGCAACAGCTGATGAATATAAT
GAAGAGCCTGTTCCAAAACATTCGCCCAAGTCTGGAGAAATCCTTTGCAAACACAAGAAT
AAAAAAGGTTTTGAACATTTTGCCCATGGACTTTGCGAAAAATGCTACAATAAGTTCACT
AAACTGTCGGGTGGACTAGAAGGTGGTGCTGACCCTCCAGCATTCCAACGAGCTGAAAAG
AAAAGACTTGAAGCTGCTAAAAGGGCTGAAGAAGCTGCCACAGTTAAGGAGGCAGCGCTG
GAAGAATCTCTTTGCAACACACAGAATTCTGAAGTTGAGAGTACCATAACTCCTAGAAAG
GGTTTAAGCGGACATAAATCTTCAACAGTTGGATCTGGTGAACTCATAAATGACTCTGTG
CCACCCAAGGATCCTGAAGAGGGAGGTGAAAATTGTGAAGGCAATGCTGATTCAGAAAGC
CTTTCTGACATCGACGATGCAGAGGTTGATTGGTACCTTCACAATGAGGAAGAAAAACAG
TATAAAAAGATTATCTGGGAGGAAATGAACAAAGAATACCTTGAGGAACAAGCAGCCAAG
GAAGCTTTGGCAGCTGAATTGGCAGCTAGAGGGATTGTTGTGGAAGAGGGAAAGAAGAAA
AAACGAAGACGTAATGAAGACACCAAGAGCTCGACACCTGCTGAAACACCGGCAGAAGCC
ACATACAACATGCTGAAACGGAAGGGACTTGGTTCAAAGATCAATGAGGGAGCTGTTGGC
GAATTGTACAAGACTAAAGATGAAGTTGGCAGCGCAAGTAAGGAAGAAGAGATGGACTTT
GACGCACTGTTTGGGCCGGACAATGCTGATGGTGAAACTGTTGATGATGGTTACAATGGG
GGCTATAACGACGATGGCGTAGAAGCCTACAATGGCATTGACGATGATTTTGATTTCTAG

Peptide Sequence

PEP ID

EES18594
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:56020413:56028337:1 gene:SORBI_3009G215500 transcript:EES18594 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTEEPTFVKGNTGESRLAGSILASI
ESGYSISHQRTLDKGKDEIRQIVNNLNVSGGETIVSKAYRFYELAVDRNFTRGRRTTHVA
AACLYIACRQTKKAYLLIDFSDYLQISVYVLGAVFLQLCQVLLLADHPVVQKLVDPSLFI
HRFTHRLLGKRDNAVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGKNYTKAD
IVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADEYNEEPVPKHSPKSGEILCKHKN
KKGFEHFAHGLCEKCYNKFTKLSGGLEGGADPPAFQRAEKKRLEAAKRAEEAATVKEAAL
EESLCNTQNSEVESTITPRKGLSGHKSSTVGSGELINDSVPPKDPEEGGENCEGNADSES
LSDIDDAEVDWYLHNEEEKQYKKIIWEEMNKEYLEEQAAKEALAAELAARGIVVEEGKKK
KRRRNEDTKSSTPAETPAEATYNMLKRKGLGSKINEGAVGELYKTKDEVGSASKEEEMDF
DALFGPDNADGETVDDGYNGGYNDDGVEAYNGIDDDFDF

Transcript Sequence

Transcript ID

EES18594
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:56020413:56028337:1 gene:SORBI_3009G215500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGTCTTAGGATGGAAAGATATTATGGTAAGAAATATGTTATATCCATTGGTGTACTGTGT
ACAGTGAGCAAATTTTTCTCGATCCGCCACTAAGTATATACATGATTCTTGATTCATACA
CACTAACTTTGATTTTTAGCAAAATTTATCGCACCCATGTCCTGTATTGAACCCGTCCCT
GTCTGTGAGTGCCACCAAGAATTTGACGGCACAAGTTTCTACTAGGAAGGAAGGAGTGCA
GTGATTAAATTGAAAAAAAAGAAAAGATTTTGCTATGTCTGTTTGGTCTTTTTTGCATGC
GAGTGAATTGGGGAATTGATGAAGGGGAAAAATGGCTCCCCAAAAACCTTTGTTTTTGAA
GAAGATAACTGTAAGGGAAATGGGAAACATGGTTCCAAAAGTCTCTTTTTTATTGAGTCT
GCATACATTTTGTAAATGAATATGATGGATGTTTTATATAGGCTTGGAACTGAACAGAAC
ATCCATTCAAAATTTCACAGATTGATATGAGCTGATCATCCCTGGCTGTGTAGTTCCTTC
TGCAATGGTTTACTGCACTCACTGCGCTGATTACTGTCCCTCCATAAAGGACCCTGACAA
AGGATACATATGTTGTGGTACATGTGGGAAGGTTCTTGATCAGGAGGTATACACTGAGGA
GCCTACTTTTGTTAAGGGTAACACAGGGGAGAGTCGCTTAGCTGGAAGTATTCTTGCAAG
TATTGAGTCTGGATATTCGATTTCTCATCAAAGAACCTTAGACAAAGGGAAGGATGAGAT
TAGACAGATTGTCAATAACTTAAATGTCAGTGGTGGAGAAACTATCGTTAGCAAGGCTTA
TCGCTTCTATGAGCTAGCTGTTGACCGTAATTTTACCAGGGGCCGTAGAACAACCCATGT
TGCAGCTGCTTGCCTTTACATTGCCTGCAGGCAAACTAAGAAAGCTTATCTTCTTATTGA
TTTCTCTGACTATCTCCAAATAAGCGTTTATGTCCTAGGTGCTGTTTTTCTCCAGCTCTG
CCAAGTTTTGCTACTCGCAGATCATCCAGTTGTTCAGAAACTTGTAGATCCCAGCCTTTT
CATCCATCGTTTTACACACCGTTTGCTCGGAAAAAGAGATAATGCTGTCTCAGACACAGC
TTTACGCATTGTAGCTAGCATGAAGAGAGATTGGATGCAGACTGGGAGGAAGCCAAGTGG
ATTGTGTGGTGCAGCATTATACATCGCTGCACTCTCTCATGGGAAAAATTACACCAAGGC
AGATATTGTCTCTGTTGTGCATGTGTGTGAGGCCACTCTAACGAAGCGATTGATAGAGTT
CGAAAATACCGATTCTGGCAGCTTAACAATTGAAGAATTTCTGGCAACAGCTGATGAATA
TAATGAAGAGCCTGTTCCAAAACATTCGCCCAAGTCTGGAGAAATCCTTTGCAAACACAA
GAATAAAAAAGGTTTTGAACATTTTGCCCATGGACTTTGCGAAAAATGCTACAATAAGTT
CACTAAACTGTCGGGTGGACTAGAAGGTGGTGCTGACCCTCCAGCATTCCAACGAGCTGA
AAAGAAAAGACTTGAAGCTGCTAAAAGGGCTGAAGAAGCTGCCACAGTTAAGGAGGCAGC
GCTGGAAGAATCTCTTTGCAACACACAGAATTCTGAAGTTGAGAGTACCATAACTCCTAG
AAAGGGTTTAAGCGGACATAAATCTTCAACAGTTGGATCTGGTGAACTCATAAATGACTC
TGTGCCACCCAAGGATCCTGAAGAGGGAGGTGAAAATTGTGAAGGCAATGCTGATTCAGA
AAGCCTTTCTGACATCGACGATGCAGAGGTTGATTGGTACCTTCACAATGAGGAAGAAAA
ACAGTATAAAAAGATTATCTGGGAGGAAATGAACAAAGAATACCTTGAGGAACAAGCAGC
CAAGGAAGCTTTGGCAGCTGAATTGGCAGCTAGAGGGATTGTTGTGGAAGAGGGAAAGAA
GAAAAAACGAAGACGTAATGAAGACACCAAGAGCTCGACACCTGCTGAAACACCGGCAGA
AGCCACATACAACATGCTGAAACGGAAGGGACTTGGTTCAAAGATCAATGAGGGAGCTGT
TGGCGAATTGTACAAGACTAAAGATGAAGTTGGCAGCGCAAGTAAGGAAGAAGAGATGGA
CTTTGACGCACTGTTTGGGCCGGACAATGCTGATGGTGAAACTGTTGATGATGGTTACAA
TGGGGGCTATAACGACGATGGCGTAGAAGCCTACAATGGCATTGACGATGATTTTGATTT
CTAGGATGTAGCAGCATTTGCCGAACGGCAAAGCTGACCAGCACGGGCACGATTCTTCAT
GTGTACATTATATAGTTTCTTTTGTTTTGGCTAAGTTTCAACTATTATTACGGAGCTATT
GGATAGTCAACATAGTTTTGCTTGTATAATAATAATATTTGAAACTAGGTTCTGCCTGGT
TGTAGTTGTAACTAAGTCCTGTGTGCTCAAGCTCCTAAAAGGGCATTGTAGATCCACCCC
AAAAGATTGCAAGCGGTGATGTAACATTTGTATTATTAATAATAAAGGAACTGAGCCGTC
TTAGA