Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18485
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:54480354:54488612:1 gene:SORBI_3009G193400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATTCTGCGAGAAGTTGGTTCCAGAAGTTCCAGCCGAGGGATAAATCCAAGAGTCCA
GCTGTGGCAGCCAGCCATGGAAAGGATCCAGGAAAGCCCCCGGTCGATGATGCCCCTTCT
AGTGCGACGAAGCAGAGGGTCGCCGCTGCAAAGCAGTACATTGAGAACCACTACAAGACC
CAGATGAAGTCCCTGCAAGACAGGAAAGAGAGGCGCTGGATGTTGGAGAGAAAATTAAAA
GATGCCGAAGTTCCTGTAGAAGAGCAAAATAATATTCTTAAGCATTTGGAGAAAAAAGAG
ACCGAATATATGCGCTTGCAGAGACACAAGATGGGAGTTGAAGATTTTGAACTTTTGACT
ATTATTGGGAGAGGTGCATTTGGAGAGGTGCGTCTTTGTAGAGAGAAGTCCTCTAAGAAT
GTGTACGCAATGAAAAAGCTCAAGAAATCTGAAATGCTTCGTAGGGGCCAGGTAGAACAT
GTCAAAGCCGAAAGGAACCTTCTTGCTGAAGTTGATAGTGCTTACATAGTTAAGCTCTAT
TATTCTTTCCAAGACGAAGAGTTCTTATATCTCATCATGGAATACCTTCCTGGTGGGGAC
ATGATGACTTTACTTATGCGCAAGGACACACTAACAGAAGATGAAGCTAGATTTTATATT
GCAGAAACGGTGCTTGCCATTGAGTCTATTCACAAGCACAACTATATTCATCGGGATATC
AAACCAGATAATCTTTTGTTAGATCGCATTGGTCACCTGAAGCTTTCTGACTTCGGTTTG
TGTAAACCTTTGGACAGCAGTAATTTTCCAATTTTGAATGAACCAGATTATACGTCTGGA
AAAGTTACCAAACCTTTGCCTGATACCACTCGGTTAAGCAACCCTTCTGCACCGAGGCGT
ACACAGCAGGAGCAATTGTCACACTGGCAAAAGAACCGCCGGATGTTGGCATACTCAACA
GTCGGTACACCTGATTATATAGCTCCAGAAGTTCTACTGAAGAAAGGATACGGAATGGAG
TGTGACTGGTGGTCCCTTGGTGCTATCATGTATGAAATGCTTGTTGGTTACCCTCCATTT
TATTCAGAGGATCCAATGTCTACTTGCAGAAAGATTGTGAACTGGAGAAGTCACTTGAAG
TTCCCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGATCTCATCAGCAAGCTTTTGTGT
AATGTTGAGCAGAGACTTGGCACAAAAGGAGCCCATGAAATAAAAGCGCATCCATGGTTT
AGAGGTGTTCAGTGGGAGAAGTTGTATCAGATGAAAGCTGCTTTCATACCAGAAGTTAAT
GGCGAGTTGGATACTCAGAATTTTGAGAAATTTGAGGAGACAGGAACTCAAATTCAAAGT
TCATCCAAGTCAGGCCCATGGAGAAAGATGCTTCCGTCCAAAGATGCAAACTTTGTTGGG
TATACATACAAGAACTTTGAAATTGTAAATGATGATGAAGTGGCAGGAATTGCCGAGTTG
AAGAAAAAGAGTTCCAAACCAAAGCGGCCAACCATCAAGACATTGTTTGAGAGCATGGAC
GAAGAGGAGCCTGTTCACGGAAGTTTTTTAGGTATGTTGCCTCCGAAGGAGGGGCAACCT
TCGTCCCACTCCAGCATTCCACCAGAAAAATACCAACCTCGACGTAAATAG

Peptide Sequence

PEP ID

EES18485
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:54480354:54488612:1 gene:SORBI_3009G193400 transcript:EES18485 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDSARSWFQKFQPRDKSKSPAVAASHGKDPGKPPVDDAPSSATKQRVAAAKQYIENHYKT
QMKSLQDRKERRWMLERKLKDAEVPVEEQNNILKHLEKKETEYMRLQRHKMGVEDFELLT
IIGRGAFGEVRLCREKSSKNVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLY
YSFQDEEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYIAETVLAIESIHKHNYIHRDI
KPDNLLLDRIGHLKLSDFGLCKPLDSSNFPILNEPDYTSGKVTKPLPDTTRLSNPSAPRR
TQQEQLSHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF
YSEDPMSTCRKIVNWRSHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAHEIKAHPWF
RGVQWEKLYQMKAAFIPEVNGELDTQNFEKFEETGTQIQSSSKSGPWRKMLPSKDANFVG
YTYKNFEIVNDDEVAGIAELKKKSSKPKRPTIKTLFESMDEEEPVHGSFLGMLPPKEGQP
SSHSSIPPEKYQPRRK

Transcript Sequence

Transcript ID

EES18485
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:54480354:54488612:1 gene:SORBI_3009G193400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCTCTCTCTCTCTACTAGTAGTCTCTCTCGCACACAGACACACTCTCTCTCCTCCCTCT
CTTCACACGGTTTGCCTCGCCTCGCCTCGCCCACGAAAAGACAAGCGGAGAGCAGGCAGG
GAAGGGGAGGGGGAGAGGAAAGGGAAAAAGCGGGTCGCGAGTGCCGCCCCCCCGCTTTTG
CTCCAATCGGCGCCGCCTCGCGCGAGATCCGCTCCGCGTGCCCCCGCCGCCGCGCCGCTG
CCGAGGTGAGCTCCGCCCCGCCCGCCCTCCCTCCCCACGCTGATCCGCGCCGGGGGCTCC
GCTCCTGCGCACGCCCGATTTGGCACTCGGTTTCCGGCCCGGGATTCCCCCTCCGCCTGG
GCCGCGCTCGGAGCTGCGGGGTGCGTGCTGACGCGGTGGGTCTCCGGTGGCGGCGAATTG
CAGCTCCGCGCTGCGTGGCCTCTGGTTCTGGTCTCACTTCTCAGAGAGTCGCCTGTGCGG
GTTCGTTTTTGTCAGTCGATGGGTTTTGCGGCTGCTTTTAGGCGGTGTTTTTTTAGGGTG
TCGCGCCACGGGCCGCGGCAATGCGATTCCCGGACCGAACTCCGCGGCTCCGGGTGTGGA
AATGGAGTTGTTGGACTATTTTTTTGGGGGGAGGTTCATGTTTGGAGCTGAGATCTTAAT
CTCTTTCTTCCTGGTTTGGAACCAGTGCTTTCGCTACTCCTTTTGATGGATATAATTCGA
TTTTGGAGTCGTCGAATTCTGAAACCTGGAGTAGCTTTACATGTGCCGTGGGCAAACGGG
CCTTGAATTGAATTATTAAATCCATAACTGTTCCGCTGACATTTTCAGTTCCATCTAGTC
GTGCCGTGGATGTCACAACTCGGTCTAACGACTCTGATCGCGGATTATTTTATTTGTTTC
AGATAGAGGGTGTCGTCCCCAGCATCGGTTTCCACGGAGAGTTGTTGATTTGGATACCTG
ATCCAATTGGGGGCGGATTGAGTCACTTGGACCTTTTCAACAGCTGTCCCGTTCCTGCTG
CTTTGGTCCCGATAAGAGGCTTGCCTGGTTCCAGAGATGATGCCATTGTGAGTGGCGATG
GATTCTGCGAGAAGTTGGTTCCAGAAGTTCCAGCCGAGGGATAAATCCAAGAGTCCAGCT
GTGGCAGCCAGCCATGGAAAGGATCCAGGAAAGCCCCCGGTCGATGATGCCCCTTCTAGT
GCGACGAAGCAGAGGGTCGCCGCTGCAAAGCAGTACATTGAGAACCACTACAAGACCCAG
ATGAAGTCCCTGCAAGACAGGAAAGAGAGGCGCTGGATGTTGGAGAGAAAATTAAAAGAT
GCCGAAGTTCCTGTAGAAGAGCAAAATAATATTCTTAAGCATTTGGAGAAAAAAGAGACC
GAATATATGCGCTTGCAGAGACACAAGATGGGAGTTGAAGATTTTGAACTTTTGACTATT
ATTGGGAGAGGTGCATTTGGAGAGGTGCGTCTTTGTAGAGAGAAGTCCTCTAAGAATGTG
TACGCAATGAAAAAGCTCAAGAAATCTGAAATGCTTCGTAGGGGCCAGGTAGAACATGTC
AAAGCCGAAAGGAACCTTCTTGCTGAAGTTGATAGTGCTTACATAGTTAAGCTCTATTAT
TCTTTCCAAGACGAAGAGTTCTTATATCTCATCATGGAATACCTTCCTGGTGGGGACATG
ATGACTTTACTTATGCGCAAGGACACACTAACAGAAGATGAAGCTAGATTTTATATTGCA
GAAACGGTGCTTGCCATTGAGTCTATTCACAAGCACAACTATATTCATCGGGATATCAAA
CCAGATAATCTTTTGTTAGATCGCATTGGTCACCTGAAGCTTTCTGACTTCGGTTTGTGT
AAACCTTTGGACAGCAGTAATTTTCCAATTTTGAATGAACCAGATTATACGTCTGGAAAA
GTTACCAAACCTTTGCCTGATACCACTCGGTTAAGCAACCCTTCTGCACCGAGGCGTACA
CAGCAGGAGCAATTGTCACACTGGCAAAAGAACCGCCGGATGTTGGCATACTCAACAGTC
GGTACACCTGATTATATAGCTCCAGAAGTTCTACTGAAGAAAGGATACGGAATGGAGTGT
GACTGGTGGTCCCTTGGTGCTATCATGTATGAAATGCTTGTTGGTTACCCTCCATTTTAT
TCAGAGGATCCAATGTCTACTTGCAGAAAGATTGTGAACTGGAGAAGTCACTTGAAGTTC
CCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGATCTCATCAGCAAGCTTTTGTGTAAT
GTTGAGCAGAGACTTGGCACAAAAGGAGCCCATGAAATAAAAGCGCATCCATGGTTTAGA
GGTGTTCAGTGGGAGAAGTTGTATCAGATGAAAGCTGCTTTCATACCAGAAGTTAATGGC
GAGTTGGATACTCAGAATTTTGAGAAATTTGAGGAGACAGGAACTCAAATTCAAAGTTCA
TCCAAGTCAGGCCCATGGAGAAAGATGCTTCCGTCCAAAGATGCAAACTTTGTTGGGTAT
ACATACAAGAACTTTGAAATTGTAAATGATGATGAAGTGGCAGGAATTGCCGAGTTGAAG
AAAAAGAGTTCCAAACCAAAGCGGCCAACCATCAAGACATTGTTTGAGAGCATGGACGAA
GAGGAGCCTGTTCACGGAAGTTTTTTAGGTATGTTGCCTCCGAAGGAGGGGCAACCTTCG
TCCCACTCCAGCATTCCACCAGAAAAATACCAACCTCGACGTAAATAGGATATGGAGGTT
CCAAAAGTAAAGCATAGGAAAGTAAAAACAAGAAAAAAAATTCTTCTGCTGCCTTTTGAT
ATGCTCCCTGTCTAAGTTTTGTAAATCCTAACCAATGCGTTCTTTAGTCAAATGCTTAAA
AAAAATCTCTCCGGCCAAATAGTGTATGGCATTTGATGTGAGCACATCAGTGTTCGCTGT
ATATTGTGTTACCGTTCTAACTTCGAATTGATGTTTCTCAGCCATATTGGCGACTCCTAG
TGTATACTAGATACAAGGGACCAGGAGCAAACAAGCTGTGCTGTTGTGGCGAACATGTGC
TATGTGTATTGACCTCATAATTGTTTCTTTGAGGTCAAGGTTCGTAGGAGCCTGATCAAC
TTCCAGCTGTATTGCTAAAAAAAAAGGAACCTGCAGTTGTAGCATAAAGAATTGGAACGC
ACGTGTCTCTTGGACAGTGACCATGTCAAACGAGTAACTGACACGTTTATCCTTGTAAAC
ATATTCTCGCCCGTCCTACCTGCATGAATGCATTTGG