Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18341
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:51894212:51897429:1 gene:SORBI_3009G162000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGATGCCGACGACGTCCTCGGCGGCGGCGCCGGCGTCGCCGCCTCGCGCGCGGCGG
TCCCGGTCCGTGGTGGCCGAACTGGAGGGCGCGCTGCTCCGGAGCGCCGACACGTTCCCG
TACTTCATGCTCGTGGCGTTCGAGGCGTCCGGCCTGCCGCGCTTCGTGCTGCTGCTGGCG
CTGTGGCCGCTGCTGCGGCTGCTGGAGCTGGGCGCCGGCCGGCGCGACCTAGCGCTGCGC
GCCGCCGCGTTCGTGGCCACCGTCGGGGTGCCTCGCGCCGACGTGGAGGCCGTGTCGCGG
GCCGTGCTGCCCAAGTTCATGGCCGACGACGTCGACCCGGCCGCGTGGGCGTCGTTCGGG
AGCTGCGAGGGGAAGCGCGTCGTCGTCACGCGGATGCCCCGCGTCATGGTGGAGCGCTTC
GCCAAGGAGCACCTCGGCGCGCACGCCGTGGTCGGCTGTGACCTCGAGTACAGCCGGCTC
AGGCGATCCACGGGGCTCCTCAAAGGCGCCGGGCATGACGCCGTCGCAACCCGTGTGCGC
GCGCTGTTCGCCGGCGACGACCGCCCGGACCTCGGGATCGGTGCGTCAGAGATGGCAAGC
TCCTTCTTGACATTCTGCCAGGAGCAGCTCAGGCCGCCGTTCACCGCGGACCACGACACG
AACGCGCCACCGTTCCGGCCGGTCATCTTCCACGACGGGCGGCTGGTGTGCCGGCCCACG
CCATTCATGTCCCTCGTCATCCTCTTCTGGCTGCCCCTCGGCGTGCTGGTCGCCTTCGTC
CGGATCGCCGTCGGCCTCATGGTCCCCATCTGGACCATCCCCTACATCGCGCCGGTCTTC
GGCGGCGCCGTGATCATCCACGGCCGCGCGCCTCCCCCCGTCAGAGTCAGCGACGACGCC
GCCGCCGCCGCCGGCTCGCCGTCGGGGGTCCTCTTCGTCTGCACGCACCGCACGCTCATG
GACCCCGTGGTGCTGGCCACCGTGCTGGGCCGCCGCGTGGCCGCCGTGACCTACTCCATC
TCCCGCCTCTCGGAGATCCTGTCCCCGATCCCGACGGTGCGGCTGACGCGCGACCGGGGC
GTGGACGCGGCGCGCATGCGCGCGGAGCTGGCCCGGGGCGACGTGGCCGTGTGCCCCGAG
GGCACCACGTGCCGGGAGCCCTTCCTGCTCCGCTTCTCCAAGCTCTTCGCGGAGCTCAGC
GACAGCATCGTGCCCGTGGCGATGAACTACCGCGTGGGGCTCTTCCACCCGACGACGGCG
CGCGGGTGGAAGGCCATGGACCCCATCTTCTTCTTCATGAACCCGCGGCCCGTGTACGAG
GTGACGTTCCTGAACCAGCTCCCCGCGGAGGCGACGTGCGCGGCGGGGAAGAGCCCCGTG
GACGTGGCCAACTACGTCCAGCGGATCCTCGCCGCCACGCTCGGGTTCGAGTGCACCACG
CTCACGAGGAAGGACAAGTACACGGTGCTCGCCGGCAACGACGGCAGCGTCAACGCCAAG
CCGCCGGCGGCCGGGAAGCCGGCTTGGCAGAGCCGCGTGAAGGAGGTCCTCGGGTTCCTG
CTCCACTAA

Peptide Sequence

PEP ID

EES18341
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:51894212:51897429:1 gene:SORBI_3009G162000 transcript:EES18341 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTMPTTSSAAAPASPPRARRSRSVVAELEGALLRSADTFPYFMLVAFEASGLPRFVLLLA
LWPLLRLLELGAGRRDLALRAAAFVATVGVPRADVEAVSRAVLPKFMADDVDPAAWASFG
SCEGKRVVVTRMPRVMVERFAKEHLGAHAVVGCDLEYSRLRRSTGLLKGAGHDAVATRVR
ALFAGDDRPDLGIGASEMASSFLTFCQEQLRPPFTADHDTNAPPFRPVIFHDGRLVCRPT
PFMSLVILFWLPLGVLVAFVRIAVGLMVPIWTIPYIAPVFGGAVIIHGRAPPPVRVSDDA
AAAAGSPSGVLFVCTHRTLMDPVVLATVLGRRVAAVTYSISRLSEILSPIPTVRLTRDRG
VDAARMRAELARGDVAVCPEGTTCREPFLLRFSKLFAELSDSIVPVAMNYRVGLFHPTTA
RGWKAMDPIFFFMNPRPVYEVTFLNQLPAEATCAAGKSPVDVANYVQRILAATLGFECTT
LTRKDKYTVLAGNDGSVNAKPPAAGKPAWQSRVKEVLGFLLH

Transcript Sequence

Transcript ID

EES18341
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:51894212:51897429:1 gene:SORBI_3009G162000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATTTCACACGACCAAGGCACCCACACAGCACGCTTGACGCACGCCACGCGGCTGGCTGC
CTAGCGCGGGCATAAATAAAAAGGAATCGTGGTCAATTAGCCGATGATCAGTTTACTCGT
CCACGCAGTTGGCTTGTTAATAGTATAATACCCCCCCCCCCCCCCCCCCCCCCCCCCTGT
TTGTTGCGAGTTAGGTGATCACCTTCGATCTCCCGCGCTTATTTTGCGCGCCACCCTGCT
GCCGCTCTCTGCACGTACGTCGTGTCGTATCCCAGGAGGACCCGGCGCGGCGCAAGGCTC
CCCGCTAATCCTACCGCTCCGCAGCCGCCGCAGCCCGCAGGTGCGGGGTGGTTGACGGCC
GCTTACCCGCTCCGGCGCCATGCGCACACGCTAGGTGCATCGAGGTCAAGCCAAACGCTG
CCCACCGCCTCTGCCTCCCATATAATCCTCGTGCACGTCCTTGCTCATCATCTCAACACA
CTTCGTCTCCGATCCTTCCGACTCATCGCCATCCATCAGGACCATCACCAGTAGGCCCAG
AGGAGCTCGATTTTCCTTCCGATCAGGACCACACCACACCACACCACCGACGTGACGCTG
ATGACGATGCCGACGACGTCCTCGGCGGCGGCGCCGGCGTCGCCGCCTCGCGCGCGGCGG
TCCCGGTCCGTGGTGGCCGAACTGGAGGGCGCGCTGCTCCGGAGCGCCGACACGTTCCCG
TACTTCATGCTCGTGGCGTTCGAGGCGTCCGGCCTGCCGCGCTTCGTGCTGCTGCTGGCG
CTGTGGCCGCTGCTGCGGCTGCTGGAGCTGGGCGCCGGCCGGCGCGACCTAGCGCTGCGC
GCCGCCGCGTTCGTGGCCACCGTCGGGGTGCCTCGCGCCGACGTGGAGGCCGTGTCGCGG
GCCGTGCTGCCCAAGTTCATGGCCGACGACGTCGACCCGGCCGCGTGGGCGTCGTTCGGG
AGCTGCGAGGGGAAGCGCGTCGTCGTCACGCGGATGCCCCGCGTCATGGTGGAGCGCTTC
GCCAAGGAGCACCTCGGCGCGCACGCCGTGGTCGGCTGTGACCTCGAGTACAGCCGGCTC
AGGCGATCCACGGGGCTCCTCAAAGGCGCCGGGCATGACGCCGTCGCAACCCGTGTGCGC
GCGCTGTTCGCCGGCGACGACCGCCCGGACCTCGGGATCGGTGCGTCAGAGATGGCAAGC
TCCTTCTTGACATTCTGCCAGGAGCAGCTCAGGCCGCCGTTCACCGCGGACCACGACACG
AACGCGCCACCGTTCCGGCCGGTCATCTTCCACGACGGGCGGCTGGTGTGCCGGCCCACG
CCATTCATGTCCCTCGTCATCCTCTTCTGGCTGCCCCTCGGCGTGCTGGTCGCCTTCGTC
CGGATCGCCGTCGGCCTCATGGTCCCCATCTGGACCATCCCCTACATCGCGCCGGTCTTC
GGCGGCGCCGTGATCATCCACGGCCGCGCGCCTCCCCCCGTCAGAGTCAGCGACGACGCC
GCCGCCGCCGCCGGCTCGCCGTCGGGGGTCCTCTTCGTCTGCACGCACCGCACGCTCATG
GACCCCGTGGTGCTGGCCACCGTGCTGGGCCGCCGCGTGGCCGCCGTGACCTACTCCATC
TCCCGCCTCTCGGAGATCCTGTCCCCGATCCCGACGGTGCGGCTGACGCGCGACCGGGGC
GTGGACGCGGCGCGCATGCGCGCGGAGCTGGCCCGGGGCGACGTGGCCGTGTGCCCCGAG
GGCACCACGTGCCGGGAGCCCTTCCTGCTCCGCTTCTCCAAGCTCTTCGCGGAGCTCAGC
GACAGCATCGTGCCCGTGGCGATGAACTACCGCGTGGGGCTCTTCCACCCGACGACGGCG
CGCGGGTGGAAGGCCATGGACCCCATCTTCTTCTTCATGAACCCGCGGCCCGTGTACGAG
GTGACGTTCCTGAACCAGCTCCCCGCGGAGGCGACGTGCGCGGCGGGGAAGAGCCCCGTG
GACGTGGCCAACTACGTCCAGCGGATCCTCGCCGCCACGCTCGGGTTCGAGTGCACCACG
CTCACGAGGAAGGACAAGTACACGGTGCTCGCCGGCAACGACGGCAGCGTCAACGCCAAG
CCGCCGGCGGCCGGGAAGCCGGCTTGGCAGAGCCGCGTGAAGGAGGTCCTCGGGTTCCTG
CTCCACTAACCCATTACTTGCACAGCTCTGGACTCTGGCCCAAATACTTCGATTGCTCAC
CAATTTGATTGAGTTTATACTGTTACATTACATTTATATACATGTACGTAATAATAAAGC
ATGTGTAGAGTAGTAGTAAAATACAGCAGTGATTCGCAAAAAAAAAAAACAAAAAAAGGG
AGTAGTGATTAGCCTTTCTTTACATAATAAGTACTGTATATTGTATTGTTCTTTATTTTT
CAATTGTTTTGGTGAATTTTTACTGGGTGTAATCAAAGGTCAAAGTTGTTC