Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18257
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:50082798:50087069:1 gene:SORBI_3009G143400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTTTCGTTAGGCAAGCAGACCCATCAACATCCTGTGCGGAGACCACTTACATCCAC
AAATTTGTGCCACCAGGATCAGTTTTCCCAGCACAAAGATTTGTCTCTGGCACCGACTTG
GTTCACTACGGACCTCAACCATATAATGCTGAGGGCTACAAACAGTCTGCTTTCAATGGG
ACAGTACCTCATGAATTTCAGAACTTTTACAGTACTGATAGCTATGCTGAATCTCACTTT
AATGAAGCAACATATTCTCCAGCAATCTCCAATATATCTCAGCAGAACTCTCAATCTTTA
TCAGACAATCAGACCTCTGATCTTGAAGTAGAGTTTGATGAGGATGAGATGAGACTGAAG
CTTCAGGAGCTTGAGCATGCTTTACTCGATGATGGCGATGAGATCTTTTCTGACTTCTCA
GGGAGCATTATCGATGAGTGGAATGATAGCATTAAGAAAAACAATGAATGGAGCAATACC
ATGAAGGATATTGTGAGTCCAGACTCTCCAAAAGAGTCATCACCTGAGTCAAGCCTCTGC
TGTCTTGACAGCAATATTGGAGAAGCGCGGCACCCAAAACAGTTGCTTTTTGACTGTGCA
GAAGCAATATCTGAATGTAGCATCGATGAAGCACAATCAATCATAACAGAACTACGACAG
AAGGTAGCAATTCAAGGAGACCCTTCTCAGAGAATTGCAGCCTATCTTGTGGAGGGCCTT
GCTGCCGCAATACAGTCTTCAGGAAAGGGGATCTATAGGGCCCTGAGGTGCAAGGAGGCC
CCTACTCTGTACCAGCTTTCAGCTATGCAGATCCTCTTTGAAATCTGCCCATGCTTCAGG
CTAGGCTTCATGGCTGCTAACTATGCTATTCTCGAAGCCTGCAAAGGCGAAGAGGTTGTG
CACATCATTGACTTTGACATCAACCAGGGTAGCCAGTATATAACTCTTATCCAGTCCCTA
AGAAATAACAGTAACAAGCCACGCCTTTTGAGGATAACTGGTGTTGATGATCCAGAGTCA
GTGCACAGAGCTGTTGGAGGGCTGAAGGTTGTTGGGCAGCGACTAGAGAAGCTTGCAGAG
GACTGTGAGGTACCATTTGAGTTCAGGGCAGTGGCTGCTAACACTGAGGATGTGACACCT
GGAATGCTAGATTGCCGTCCTGGAGAGGCCCTCATTGTTAACTTTGCATTCCTGCTGCAC
CACCTTCCTGATGAAAGCGTCTCAATTGTGAACCAAAGGGATCAGCTTCTCCGTATGGTG
AAGGGTCTTCAACCAAAACTAGTGACGTTGGTGGAGCAGGATGCAAATACTAACACCACC
CCATTCCTTGCCAGGTTCCGGGAGGTCTATGACTACTATTCGGCACTTTTTGATTCACTG
GATGCAACCCTTCCGAGGGAAAGCCCGGATAGAATGAATGTGGAGCGCCAGTGCCTCGCA
CGAGAAATCGTCAACATCTTAGCTTGTGAAGGTCCTGACCGTGTGGAAAGGTATGAAGTG
GCTGGGAAATGGAGAGCTAGGATGGCAATGGCTGGCTTTGCGCCGTGCCCATTTAGCAGC
AACGTGATCAATGGCATAAGATCTCTACTGAAATCGTCGTACTGCGATAAGTACAGGTTC
GAGAAGGTCCACGATGGCCTCCATTTTGGCTGGGGCGACAAGACGCTCGTCTTCTCGTCG
GCGTGGCAATAG

Peptide Sequence

PEP ID

EES18257
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:50082798:50087069:1 gene:SORBI_3009G143400 transcript:EES18257 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSFVRQADPSTSCAETTYIHKFVPPGSVFPAQRFVSGTDLVHYGPQPYNAEGYKQSAFNG
TVPHEFQNFYSTDSYAESHFNEATYSPAISNISQQNSQSLSDNQTSDLEVEFDEDEMRLK
LQELEHALLDDGDEIFSDFSGSIIDEWNDSIKKNNEWSNTMKDIVSPDSPKESSPESSLC
CLDSNIGEARHPKQLLFDCAEAISECSIDEAQSIITELRQKVAIQGDPSQRIAAYLVEGL
AAAIQSSGKGIYRALRCKEAPTLYQLSAMQILFEICPCFRLGFMAANYAILEACKGEEVV
HIIDFDINQGSQYITLIQSLRNNSNKPRLLRITGVDDPESVHRAVGGLKVVGQRLEKLAE
DCEVPFEFRAVAANTEDVTPGMLDCRPGEALIVNFAFLLHHLPDESVSIVNQRDQLLRMV
KGLQPKLVTLVEQDANTNTTPFLARFREVYDYYSALFDSLDATLPRESPDRMNVERQCLA
REIVNILACEGPDRVERYEVAGKWRARMAMAGFAPCPFSSNVINGIRSLLKSSYCDKYRF
EKVHDGLHFGWGDKTLVFSSAWQ

Transcript Sequence

Transcript ID

EES18257
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:50082798:50087069:1 gene:SORBI_3009G143400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGTTTGGTCGGTACAGGGGCTAGAGTAGTAGGCTAGCCTACTTGCCGCGTCACGCCCG
ACGTACAGGCAGCCTTCGTTATACCCGCCCCCAACAACCCACGCGCGGCGCCCACCGTTT
CTGCCCTCGTCGTCTCCCCACCTCGCTCGGCTCCTCTTCTTCGCCTGTTCTGCTCCGCGC
CCTCACCCTCCGCAGCCAGTTTGCTCGCTCGCTCGCCGCCGCGCGCTGAGCCTTCTCCAC
CCTTCTTCCTCCAAGTCCTCCGCAGATTGGACCGCGGCCCGCTGCTGCCCCGTCGGCGGC
CCCCCGCACCGCCCCGATCATATCCTCGCAGGTAAGGGTCTCTCGCTCGCGAAATCGTTT
TGCTCCTTTATTTCCCTTTCCGGACCCTCGATCGTTCCGTTGAGCGGTGGCAGTAGACCG
CACGCACGATTGTGCCGTTCGTGGAGAGATGCGCCCGGGCTAGCGTGTGTTGCAGCTGAT
CCGACTCCGACGGAGAAGGGGCAAATTAGATTAGGAGCGCTGTGTTGATGGAAACGGAGG
AGAGATCGCCGCGTCTTTGCTAGTTGGGGGGGGGGGGGGGGGGAAACCGCATGGTTTGCT
CCGAGTTAACTCCGAAGATCCAGCTTCGCAAGATCATCTTGTGAGGGCCAATTTCGTCGT
AGTTCGTCGGAGATTTTTCTTCCTCCTCCTCCTGGCTCCTCCCGAGTCCTCTGATTTCTG
TAGCCGCTTAATGCTTATTTTTATACCAGAACGTGTAATATTGGTGGAGAATACAAGTAT
GTTGGTTCTTACTGGTCTAACTTCCACGTATTTTTATTTATCCATTTATTACTCAGGACT
TAACAGCTGGTTTCCATCTGCAATGTTGCCTAGTATGTAGTCTTAGGTATGAATACACAT
GTTGAGTAATAGTACACGTCTGCCTACTTTAAGCCTTTATGTATATACTTCCCGCTCGAT
TTGGTTTTTGGTTCCAAGAGCACCAAGTTAGTCAACGTTGCAGGTCTGGGGGATAAGGTT
ACCAAGTCTTGGAAGCAACTCCAAACTGGGTGGGCTACCCTTTTTCATTTTTTAATGACG
TGCTGTAGACATCATGTTCTTATAATGGACTGATGGATTTGATCAATCGACTTGCTTTGC
TGTGAAGTACAGCAGTCACCGCCACTGTCATACAAGTCCAAGCATATAAGACTTAATGTG
ACAATGTATACCTTTGTCTTTTGTTCTCATACCTGTTTCACACAAAGGCATTAGAAATTT
GTATCTCACGTCTAGTAAGCCTATGGTCGCAGCAAAAACAAAAAAAGAAAAACAAAAGTT
TGGGGAACCATAAATGCCTTTTTGTACTCCTTATATTATATGTTGTTTTCTAACTGCAGG
TGAATTGTTCAGGCTGAATTAATCGGTGGAAGCTGTGCATTGGCTGTTTTTATCTCAGAT
CATAGTGATAAATTGACCTGAGAGACTGAGATTTGTGAGAGAAGTAATGTCTTTCGTTAG
GCAAGCAGACCCATCAACATCCTGTGCGGAGACCACTTACATCCACAAATTTGTGCCACC
AGGATCAGTTTTCCCAGCACAAAGATTTGTCTCTGGCACCGACTTGGTTCACTACGGACC
TCAACCATATAATGCTGAGGGCTACAAACAGTCTGCTTTCAATGGGACAGTACCTCATGA
ATTTCAGAACTTTTACAGTACTGATAGCTATGCTGAATCTCACTTTAATGAAGCAACATA
TTCTCCAGCAATCTCCAATATATCTCAGCAGAACTCTCAATCTTTATCAGACAATCAGAC
CTCTGATCTTGAAGTAGAGTTTGATGAGGATGAGATGAGACTGAAGCTTCAGGAGCTTGA
GCATGCTTTACTCGATGATGGCGATGAGATCTTTTCTGACTTCTCAGGGAGCATTATCGA
TGAGTGGAATGATAGCATTAAGAAAAACAATGAATGGAGCAATACCATGAAGGATATTGT
GAGTCCAGACTCTCCAAAAGAGTCATCACCTGAGTCAAGCCTCTGCTGTCTTGACAGCAA
TATTGGAGAAGCGCGGCACCCAAAACAGTTGCTTTTTGACTGTGCAGAAGCAATATCTGA
ATGTAGCATCGATGAAGCACAATCAATCATAACAGAACTACGACAGAAGGTAGCAATTCA
AGGAGACCCTTCTCAGAGAATTGCAGCCTATCTTGTGGAGGGCCTTGCTGCCGCAATACA
GTCTTCAGGAAAGGGGATCTATAGGGCCCTGAGGTGCAAGGAGGCCCCTACTCTGTACCA
GCTTTCAGCTATGCAGATCCTCTTTGAAATCTGCCCATGCTTCAGGCTAGGCTTCATGGC
TGCTAACTATGCTATTCTCGAAGCCTGCAAAGGCGAAGAGGTTGTGCACATCATTGACTT
TGACATCAACCAGGGTAGCCAGTATATAACTCTTATCCAGTCCCTAAGAAATAACAGTAA
CAAGCCACGCCTTTTGAGGATAACTGGTGTTGATGATCCAGAGTCAGTGCACAGAGCTGT
TGGAGGGCTGAAGGTTGTTGGGCAGCGACTAGAGAAGCTTGCAGAGGACTGTGAGGTACC
ATTTGAGTTCAGGGCAGTGGCTGCTAACACTGAGGATGTGACACCTGGAATGCTAGATTG
CCGTCCTGGAGAGGCCCTCATTGTTAACTTTGCATTCCTGCTGCACCACCTTCCTGATGA
AAGCGTCTCAATTGTGAACCAAAGGGATCAGCTTCTCCGTATGGTGAAGGGTCTTCAACC
AAAACTAGTGACGTTGGTGGAGCAGGATGCAAATACTAACACCACCCCATTCCTTGCCAG
GTTCCGGGAGGTCTATGACTACTATTCGGCACTTTTTGATTCACTGGATGCAACCCTTCC
GAGGGAAAGCCCGGATAGAATGAATGTGGAGCGCCAGTGCCTCGCACGAGAAATCGTCAA
CATCTTAGCTTGTGAAGGTCCTGACCGTGTGGAAAGGTATGAAGTGGCTGGGAAATGGAG
AGCTAGGATGGCAATGGCTGGCTTTGCGCCGTGCCCATTTAGCAGCAACGTGATCAATGG
CATAAGATCTCTACTGAAATCGTCGTACTGCGATAAGTACAGGTTCGAGAAGGTCCACGA
TGGCCTCCATTTTGGCTGGGGCGACAAGACGCTCGTCTTCTCGTCGGCGTGGCAATAGAA
GCTTGCGTTGCATATCTTAGCACTGCCAGCGTTTTAGGAGCATCTGGTGCAAGGGCTGTA
AAGAGATTTCTGTCACCGTATTGTTGACCTATCATATATACTCGTACCTAACCTTAGCGT
GCTGCCTGTAGCCTTATGAGGTTGTATATTGTGTATTGTACACCTTGGTGTAGAGTCACC
GTGGTGTATCTAATTTTGCCCTTCTTTTGGAGGGGTAGAATCGCAATATGTCGACATTGT
TTCGTGTATAAAGTACTGGATGATGATGCTCTTGTCGCAAAAAAGATGGGATAAAATAAC
AAAGATTCGTCAGTCCGGTGCATGGCTATATATTCAAGGAGGATTATTCATGATGAGCAC
CGGAATGCTTGTGTCATTGTGTGGGTCTGCATTATAATATCCGAGGCCGTGAATGCTGTG
GTTGGCCTATCCCTCTCTACGTGCATACTTACTGACGTCTTCAAAATTGTCCAGTTCATC
CACTTGGGATTTTCGATCTTGCAAACGAGAGAAGCTTCCACGAAACAACATGCAGCTGCA
GGTTTCTCCGAC