Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18229
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:49263612:49267981:1 gene:SORBI_3009G136500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCCTGCTCTGCTTGTGAGCACCACACGCATCAATCACTGGCCATAACAAGCAGCGAG
AGCTCCCTGCATCCAGCCATGGCAACCACGACGGCGGTTGGTAGGAATGGAGAAGGAGAG
CAGAAGAGGAGGGAGAAAGGAGGCTTCAAGACCATGCCATTCATACTTGGGAACGACATC
TGCGACCGGTTCGCCACGGCCGGCTTCGGCGCCAACCTGATCACGTACCTGACGAAGCAG
CTGCACCTGCCGCTGGTGGAGGCGTCCAACCTCCTCACAAACTTCGGCGGCACCTCCAGC
CTCACAACCATCCTCGGCGCGCTCGCCGCCGACTCCTTCGCGGGCCGATTCTGGACCATC
GTCGCCGGCTCCGTCTTCTACCAGCTCGGCATGCTCGGCCTCGTCGTGTCCGCGCTCCTC
CCTTGGCTACGCCCCTCGCCGTGCTCCGCTCCTCCCGGCGGCCCCGAATGCCACCGCGCC
TCCGGGTTGCAGCTCGCCGTGCTGTACCTCTCCCTGCTGTGCACCGCCTTCGGCTCCGGC
GGTCTCCGGCCCTGCGTCGTGATGTTCGGCACCGACCAGTTCGACCACGAGACTAGTGAG
AAGCAGGTCACCGCCGAGGCGGCCGAGGCGGTGGCGGAGCGGAAGCGTCGCTACTTCAAC
CTCTACTTCTTCACGATGGGGGTAGCGGCGCTGCTGGCGCTGACGGTGGTGGTGTACATC
CAGGACAACGTGGGGTGGGGGTGGGGGTTCGGGATCCCGGCCATCGCCATGTTCGTCTCC
ATCGTGGTGTTCGTGATCGGGTACCCGCTGTACGTCCAGGTCAAGCCGGGGGGCTCCCCG
TTCACGCGGCTCGCGCAGGTGGCCGCCGCCGCGTTCAAGAAGCGCAACGCCGCCGTACCG
GAGGACACGGGCATGCTGTACCAGGACAAGGAGCTCGACGTCCTTATCTCCACCAACGGC
AGGCTGCTGCACACCAACCAGCTCACGTTCTTGGACCGGGCAGCTATAGTAACGCCGGGC
GACATCTCCGCTTCCGGGCAGCCGGATCTGTGGCGTCTGTCGACGGTGCACCGCGTGGAG
GAGCTCAAGTCCATCGTCCGCATGCTCCCAATCTGGTCAGCCGGCATCATGCTTTCCACC
ATTGAATCGCACAACGGCACCTTCATCATCGTCCAGGCAGGCAGCATGGACCGGCACATC
ACCCGGCACTTCGAGATACCACCAGCGACCATGTCGATCTTCGGGACTGCGGTCTTCCTC
GTCAGCTTGGCGCTCTACGACCGCGCGTTCGTGCCCCTGGCACGCCGCGTGACGGGCCTG
CAGTCCGGGATCACCTACTTCCAGCGCATGGGCGTCGGGCTCGCCATCCACATCCTCGGC
GTCGCCACGGCCGCGCTCGTGGAGACCAAGCGCCGCCACGCCGCGGCCGACCACGGGCTC
CTGGACAATCCTACCGCCGTCATCCCGCTCAGCGTGTTCTGGCTGGTGCCGCAGTTCGCC
GTCCACGGCGTCGCCGGCGCCTTCTCGTCAGTGGGGCACATGGAGTTCCTGTACGACCAA
GCGCCCGAGAGCATGCGCAGTACCGCCGCCGCGCTCTTCTGGCTCGCCGGCGCCTTCGGG
AACTACCTGGGTACCGTGCTGGTGACGGTGGTGCAGCGCACCACGCGCGCCCGCGGCAAC
GACTGGCTCCAGGACAACATCAACCGTGGCAGGATCGACAACTACTACTGGCTCGTCACC
TGCCTCATGGTGCTTAACCTTGGCTACTTCCTTATCTGCTTCCGTTTCTACACCATGAAG
CCACTGGAGATGGCAGACGAACAAGACGATCATGACGGAGAATGTGAGCTCTCCACTCTA
CAGAAAAATGATACCGGTGCTGGAGGTGTGGTGTAA

Peptide Sequence

PEP ID

EES18229
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:49263612:49267981:1 gene:SORBI_3009G136500 transcript:EES18229 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPCSACEHHTHQSLAITSSESSLHPAMATTTAVGRNGEGEQKRREKGGFKTMPFILGNDI
CDRFATAGFGANLITYLTKQLHLPLVEASNLLTNFGGTSSLTTILGALAADSFAGRFWTI
VAGSVFYQLGMLGLVVSALLPWLRPSPCSAPPGGPECHRASGLQLAVLYLSLLCTAFGSG
GLRPCVVMFGTDQFDHETSEKQVTAEAAEAVAERKRRYFNLYFFTMGVAALLALTVVVYI
QDNVGWGWGFGIPAIAMFVSIVVFVIGYPLYVQVKPGGSPFTRLAQVAAAAFKKRNAAVP
EDTGMLYQDKELDVLISTNGRLLHTNQLTFLDRAAIVTPGDISASGQPDLWRLSTVHRVE
ELKSIVRMLPIWSAGIMLSTIESHNGTFIIVQAGSMDRHITRHFEIPPATMSIFGTAVFL
VSLALYDRAFVPLARRVTGLQSGITYFQRMGVGLAIHILGVATAALVETKRRHAAADHGL
LDNPTAVIPLSVFWLVPQFAVHGVAGAFSSVGHMEFLYDQAPESMRSTAAALFWLAGAFG
NYLGTVLVTVVQRTTRARGNDWLQDNINRGRIDNYYWLVTCLMVLNLGYFLICFRFYTMK
PLEMADEQDDHDGECELSTLQKNDTGAGGVV

Transcript Sequence

Transcript ID

EES18229
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:49263612:49267981:1 gene:SORBI_3009G136500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAGCTCTTCATCGACACAGATGCAGCGGTATTGACCCCCCTAGTCTTTTCCATATCGAG
GAGATGGATGGGCACCTGAATAAGATATGGTGTCTATCTTCAACGCTGTTTGAGCACCGT
TACGGAAGAGGTTGGACCTAGTGCTGACTGGTGAGTCTGTCTTTGAAGTAAAGCCACGAG
AAAATATAGCTATTATTTCGCTACCTCTGGCAGGTACGGTCGTCGTGTCTATATATATGA
ACATGTGGTTCCATACTTCCATATCCTCGCATGCATGTGAGAGCCATATAGCTCAGTCTC
ACTGTCGCCTGCATGCCCTGCTCTGCTTGTGAGCACCACACGCATCAATCACTGGCCATA
ACAAGCAGCGAGAGCTCCCTGCATCCAGCCATGGCAACCACGACGGCGGTTGGTAGGAAT
GGAGAAGGAGAGCAGAAGAGGAGGGAGAAAGGAGGCTTCAAGACCATGCCATTCATACTT
GGGAACGACATCTGCGACCGGTTCGCCACGGCCGGCTTCGGCGCCAACCTGATCACGTAC
CTGACGAAGCAGCTGCACCTGCCGCTGGTGGAGGCGTCCAACCTCCTCACAAACTTCGGC
GGCACCTCCAGCCTCACAACCATCCTCGGCGCGCTCGCCGCCGACTCCTTCGCGGGCCGA
TTCTGGACCATCGTCGCCGGCTCCGTCTTCTACCAGCTCGGCATGCTCGGCCTCGTCGTG
TCCGCGCTCCTCCCTTGGCTACGCCCCTCGCCGTGCTCCGCTCCTCCCGGCGGCCCCGAA
TGCCACCGCGCCTCCGGGTTGCAGCTCGCCGTGCTGTACCTCTCCCTGCTGTGCACCGCC
TTCGGCTCCGGCGGTCTCCGGCCCTGCGTCGTGATGTTCGGCACCGACCAGTTCGACCAC
GAGACTAGTGAGAAGCAGGTCACCGCCGAGGCGGCCGAGGCGGTGGCGGAGCGGAAGCGT
CGCTACTTCAACCTCTACTTCTTCACGATGGGGGTAGCGGCGCTGCTGGCGCTGACGGTG
GTGGTGTACATCCAGGACAACGTGGGGTGGGGGTGGGGGTTCGGGATCCCGGCCATCGCC
ATGTTCGTCTCCATCGTGGTGTTCGTGATCGGGTACCCGCTGTACGTCCAGGTCAAGCCG
GGGGGCTCCCCGTTCACGCGGCTCGCGCAGGTGGCCGCCGCCGCGTTCAAGAAGCGCAAC
GCCGCCGTACCGGAGGACACGGGCATGCTGTACCAGGACAAGGAGCTCGACGTCCTTATC
TCCACCAACGGCAGGCTGCTGCACACCAACCAGCTCACGTTCTTGGACCGGGCAGCTATA
GTAACGCCGGGCGACATCTCCGCTTCCGGGCAGCCGGATCTGTGGCGTCTGTCGACGGTG
CACCGCGTGGAGGAGCTCAAGTCCATCGTCCGCATGCTCCCAATCTGGTCAGCCGGCATC
ATGCTTTCCACCATTGAATCGCACAACGGCACCTTCATCATCGTCCAGGCAGGCAGCATG
GACCGGCACATCACCCGGCACTTCGAGATACCACCAGCGACCATGTCGATCTTCGGGACT
GCGGTCTTCCTCGTCAGCTTGGCGCTCTACGACCGCGCGTTCGTGCCCCTGGCACGCCGC
GTGACGGGCCTGCAGTCCGGGATCACCTACTTCCAGCGCATGGGCGTCGGGCTCGCCATC
CACATCCTCGGCGTCGCCACGGCCGCGCTCGTGGAGACCAAGCGCCGCCACGCCGCGGCC
GACCACGGGCTCCTGGACAATCCTACCGCCGTCATCCCGCTCAGCGTGTTCTGGCTGGTG
CCGCAGTTCGCCGTCCACGGCGTCGCCGGCGCCTTCTCGTCAGTGGGGCACATGGAGTTC
CTGTACGACCAAGCGCCCGAGAGCATGCGCAGTACCGCCGCCGCGCTCTTCTGGCTCGCC
GGCGCCTTCGGGAACTACCTGGGTACCGTGCTGGTGACGGTGGTGCAGCGCACCACGCGC
GCCCGCGGCAACGACTGGCTCCAGGACAACATCAACCGTGGCAGGATCGACAACTACTAC
TGGCTCGTCACCTGCCTCATGGTGCTTAACCTTGGCTACTTCCTTATCTGCTTCCGTTTC
TACACCATGAAGCCACTGGAGATGGCAGACGAACAAGACGATCATGACGGAGAATGTGAG
CTCTCCACTCTACAGAAAAATGATACCGGTGCTGGAGGTGTGGTGTAAGGTTGTTTTGCA
GTCAATTAATTAGTGTGGGCTTCAGTAATTAATATATATATATATATACTTGCAAAAATA
TCTGTGCGATGCTGTGGGACGTATACCTGCACGACATGAAGCT