Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18167
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:47810835:47814674:1 gene:SORBI_3009G125000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGTCGCGGGGCCGGGGCAGCTCAACCTCGACGAGTCGCCGTCATGGGGATCCCGT
AGCGTTGACTGCTTCGAGAAACTCGAGCAGATCGGGGAGGGCACCTACGGGCAAGTCTTC
ATGGCGAAGGAGACGGAGACGAAGGAAATCGTGGCGCTGAAGAAGATCCGAATGGACAAC
GAGCGGGAGGGCTTCCCTATCACGGCCATCCGCGAGATTAAAATCCTGAAGAAGCTGCAC
CACCAGAACGTCATCAATCTCAAAGAGATTGTCACCTCGCCAGGGCCAGAGAGAGATGGG
CAGGGGAAGCAAATTGAAGGCAACAAGTACAAAGGGAGCATTTACATGGTCTTTGAGTAC
ATGGATCATGACTTGACCGGGCTGTCAGACAGGCCTGCAATGCGGTTCAGCATACCACAG
GTTAAGTGCTACATGAGACAACTCCTTATGGGTCTACACTATTGTCATATCAATCAAGTT
CTGCATCGAGATATTAAAGGATCTAATCTCTTGATAGACAATCATGGTATCTTAAAGCTT
GCTGATTTTGGCCTGGCGAGATCATTTTCAAATGATCACCATGCAAACCTTACTAACCGT
GTTATCACCTTGTGGTACAGACCCCCAGAGTTGTTGTTGGGAAGCACACAATATGGGCCA
GCAGTTGACATGTGGTCTGTGGGTTGTATTTTTGCAGAGCTTCTTTATGGAAAGCCTATA
TTGCCTGGAAAGAATGAGCCAGAGCAGCTGACAAAAATATTTGAGCTTTGTGGTACACCT
GATGAGTTCAACTGGCCAGGCGTCATGAAATTGCCATGGTATAATAATTTAAAGCCTCCT
CGAGTAATTACAAGACGTGTTAAGGAGGTTTTTAAGCATTTTGACCCACATGCTCTGGAT
CTGCTTGAGAAGATGTTAACACTGGATCCATCACAGAGGATATCGGCAAAAGATGCACTT
GATGCAGATTACTTTTGGACTGATCCCCCGCCAGCTGAGCCTCACACCTTGCCCAAGTAT
GAATCATCACATGAATTCCAGACTAAGAAAAAACGTCAACAGCAGCGGCAAGCTGAAGAA
GCGGCAAAGCGGCAAAAGGTTCAGCATCCTCATCCACATACTCGTTTGCCACCAATTCAA
CACCCGGGCCAACAACATTCACAGATCAGGTCAGGGCAACCTATGGGCAACCCTCATGCT
CCAATGGCATCTGGGCCAAGCCATAACTACACAAAACCCCGAGGTACAGGAGGGCCAAAC
AGATATCCACAGGGTGGAAACCAAGGTGGAGGATACCAAAATCGTGGTGGGCAAGGTGGC
GGCTACAGCAGTGGCTCGTATCCGCAACAAGGCCGAGGGCCACCGCCATACCCTGGTGGT
GGGATGGGTGGAACAGGTGGCCCAAGGGGTGGAAATGGCAGTGGCTATGGAGTTGGCAGA
CCAAATTATCAGCAGGTTGGCCCTTATGGCGTGTCTGGCCCAGGCAGAGGGTCAAACTAT
CCCCAACAAGGTGGTTCTCGCAATCAGCAGCAGCATGGAAACTGGCAGTAA

Peptide Sequence

PEP ID

EES18167
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:47810835:47814674:1 gene:SORBI_3009G125000 transcript:EES18167 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVAGPGQLNLDESPSWGSRSVDCFEKLEQIGEGTYGQVFMAKETETKEIVALKKIRMDN
EREGFPITAIREIKILKKLHHQNVINLKEIVTSPGPERDGQGKQIEGNKYKGSIYMVFEY
MDHDLTGLSDRPAMRFSIPQVKCYMRQLLMGLHYCHINQVLHRDIKGSNLLIDNHGILKL
ADFGLARSFSNDHHANLTNRVITLWYRPPELLLGSTQYGPAVDMWSVGCIFAELLYGKPI
LPGKNEPEQLTKIFELCGTPDEFNWPGVMKLPWYNNLKPPRVITRRVKEVFKHFDPHALD
LLEKMLTLDPSQRISAKDALDADYFWTDPPPAEPHTLPKYESSHEFQTKKKRQQQRQAEE
AAKRQKVQHPHPHTRLPPIQHPGQQHSQIRSGQPMGNPHAPMASGPSHNYTKPRGTGGPN
RYPQGGNQGGGYQNRGGQGGGYSSGSYPQQGRGPPPYPGGGMGGTGGPRGGNGSGYGVGR
PNYQQVGPYGVSGPGRGSNYPQQGGSRNQQQHGNWQ

Transcript Sequence

Transcript ID

EES18167
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:47810835:47814674:1 gene:SORBI_3009G125000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTTCTCTTCCTCGTTCTTTCCCTTTTTGCGTGGCAGGTTCCGCCCCCAAACCCAATCCT
CGCGTCCCCCCCAAACCCTAGTGCATTGCAAAGCACCGGAATCCATGGCGGTCGCGGGGC
CGGGGCAGCTCAACCTCGACGAGTCGCCGTCATGGGGATCCCGTAGCGTTGACTGCTTCG
AGAAACTCGAGCAGATCGGGGAGGGCACCTACGGGCAAGTCTTCATGGCGAAGGAGACGG
AGACGAAGGAAATCGTGGCGCTGAAGAAGATCCGAATGGACAACGAGCGGGAGGGCTTCC
CTATCACGGCCATCCGCGAGATTAAAATCCTGAAGAAGCTGCACCACCAGAACGTCATCA
ATCTCAAAGAGATTGTCACCTCGCCAGGGCCAGAGAGAGATGGGCAGGGGAAGCAAATTG
AAGGCAACAAGTACAAAGGGAGCATTTACATGGTCTTTGAGTACATGGATCATGACTTGA
CCGGGCTGTCAGACAGGCCTGCAATGCGGTTCAGCATACCACAGGTTAAGTGCTACATGA
GACAACTCCTTATGGGTCTACACTATTGTCATATCAATCAAGTTCTGCATCGAGATATTA
AAGGATCTAATCTCTTGATAGACAATCATGGTATCTTAAAGCTTGCTGATTTTGGCCTGG
CGAGATCATTTTCAAATGATCACCATGCAAACCTTACTAACCGTGTTATCACCTTGTGGT
ACAGACCCCCAGAGTTGTTGTTGGGAAGCACACAATATGGGCCAGCAGTTGACATGTGGT
CTGTGGGTTGTATTTTTGCAGAGCTTCTTTATGGAAAGCCTATATTGCCTGGAAAGAATG
AGCCAGAGCAGCTGACAAAAATATTTGAGCTTTGTGGTACACCTGATGAGTTCAACTGGC
CAGGCGTCATGAAATTGCCATGGTATAATAATTTAAAGCCTCCTCGAGTAATTACAAGAC
GTGTTAAGGAGGTTTTTAAGCATTTTGACCCACATGCTCTGGATCTGCTTGAGAAGATGT
TAACACTGGATCCATCACAGAGGATATCGGCAAAAGATGCACTTGATGCAGATTACTTTT
GGACTGATCCCCCGCCAGCTGAGCCTCACACCTTGCCCAAGTATGAATCATCACATGAAT
TCCAGACTAAGAAAAAACGTCAACAGCAGCGGCAAGCTGAAGAAGCGGCAAAGCGGCAAA
AGGTTCAGCATCCTCATCCACATACTCGTTTGCCACCAATTCAACACCCGGGCCAACAAC
ATTCACAGATCAGGTCAGGGCAACCTATGGGCAACCCTCATGCTCCAATGGCATCTGGGC
CAAGCCATAACTACACAAAACCCCGAGGTACAGGAGGGCCAAACAGATATCCACAGGGTG
GAAACCAAGGTGGAGGATACCAAAATCGTGGTGGGCAAGGTGGCGGCTACAGCAGTGGCT
CGTATCCGCAACAAGGCCGAGGGCCACCGCCATACCCTGGTGGTGGGATGGGTGGAACAG
GTGGCCCAAGGGGTGGAAATGGCAGTGGCTATGGAGTTGGCAGACCAAATTATCAGCAGG
TTGGCCCTTATGGCGTGTCTGGCCCAGGCAGAGGGTCAAACTATCCCCAACAAGGTGGTT
CTCGCAATCAGCAGCAGCATGGAAACTGGCAGTAACATTTTAACACTACCTTTTTCGTTT
CTTTTTTTTTAGATTTGATCATTTCAGATGGTCCTAAATCAGATAGATTTATCGAATTGT
AGGTTGATTTAGTCTGGTAATAAATATCCATTGACTATAACTACAGTTAGTTACGAATGA
ACTATCGACATCTAGTATAACTTGGTGATTGCCCAT