Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18166
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:47789740:47794365:1 gene:SORBI_3009G124800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGATCTGGGAGCAGCAAGGCCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCGTCA
TCGCGCACGTTGGCGGAGGCGGCGGGCGGCGAGGTTAAGAGGCCGAATGGGAGCGGGAAG
GGGAGGAGGGGGAGGAGCCTTTTGCCGAGCTCCTCCTGCTTCCGTGGCTCCACGACGCCG
CCGTGCGAAGGCGACGCTTCCGCAGCACCGGTGGACGTCGAGTGTAACAAGGGAGGGGAG
ACTGCAAGCCTGCCTTCACTCACTCACACTGCAAAGTCTGATGAAGATGTTCTTGCAATG
CCTAAGTCTTATCCCGGCGAAGGGGTAGCAGTACCTTCATCAGATAGTGAAAGAGATCAA
GATGATGATGTGCTACAGAATGCTGCTGCCACTAGCACATCAACAGCGGCCAATCAATTG
CCAAATCCTTCTGGGAGGTCAAGGCCACGTTTTGGTGTCAACTTTGGGTTGAGTAGAGCT
GTCAGCTTGGGATCATCAGCAGCCTGCTCTATTCTGTCATCTGGCCTCCCGACTTCTGCT
AATCCAGGTGAAGGTCGGAGAGATGTGGATGACTCTTCTGATACAGGCATCTCCCAGCAG
GGTACTGCACCGACTGCTGGGATTGATTCGACTCTGGATATGCTTAGAGATAGTGTCACG
GCACAAGCTAGAGCAGCTCGTCAGGCTAGGAGAAATCTGCTAGAATCTGAAGATGCTAGC
TTGAGGAGCTCCTACAGAAGGATGGGGTCTCAGGAACCTTTTGAAGGCAGTGTTCGGTTT
AGCCGAACATTAAGTGTTGGGCGGCTTCGGGACAGAGTTCTCAGGCGGCCTCCATTCTCA
GATGGGCTATTCACCCCTTCGCTTCTTTATGATAGGGCAGTATGGCCATCTGGAAACGCT
AGTGCTAGGCAAGATTCAGCAGTAATGCAAAGGACTAATTCAGACAGGAGTTCAGAACCG
CGATCTGATCCTTCAACCAACGATATGTACAACTTGAGCTCTGAGAGGCAGGCCAGTAAT
AGCGACCTACTGGAGCGCAGATCAGCTTTTCTTGAGAGGAGGAGGAGGATACGATCTCAG
GTCAGAGCTCTGCAAAGGTTGGGCAGCAGGTTTGAAAATTTATCAGGTCATGAGAGGTCC
TGCATATTATCCGGTCAGCATAGAACAGGAAATTGCAACTGCAGAACAGGTAGTCGACAA
GGCAATCCTGATGAAGAAACTAGCACAAGGGCTAGCATATCGAGAATTGTTATGTTAGCA
GAAGCACTTTTTGAGGTTCTTGATGAAATTCACCACCAATCTGCTGCATTATCGTCATCA
AGACCATCGTTTTCTTCAATTGGATCCGTTCCTGCTCCAAGGGAGATTGTTGAGCGTCTT
CCTGCAAAAGTGTATAGGAAACCGTTGAAATACCAGAGCGATGAAGCTGCACAATGCTAT
ATTTGCCTTGTTGAATATGAAGAGGGAGATTGTCTCCGTATACTTCCATGCCATCATGAA
TTTCATCTAACATGTGTAGATAAATGGCTAAAGGAGATTCACAGGGTTTGTCCACTTTGT
CGTGGCGATGTCTGCAGATCTGATGCACCGAGTAGAAAGGTCAGCTGA

Peptide Sequence

PEP ID

EES18166
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:47789740:47794365:1 gene:SORBI_3009G124800 transcript:EES18166 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGSGSSKATTTSSSSSSSSSSRTLAEAAGGEVKRPNGSGKGRRGRSLLPSSSCFRGSTTP
PCEGDASAAPVDVECNKGGETASLPSLTHTAKSDEDVLAMPKSYPGEGVAVPSSDSERDQ
DDDVLQNAAATSTSTAANQLPNPSGRSRPRFGVNFGLSRAVSLGSSAACSILSSGLPTSA
NPGEGRRDVDDSSDTGISQQGTAPTAGIDSTLDMLRDSVTAQARAARQARRNLLESEDAS
LRSSYRRMGSQEPFEGSVRFSRTLSVGRLRDRVLRRPPFSDGLFTPSLLYDRAVWPSGNA
SARQDSAVMQRTNSDRSSEPRSDPSTNDMYNLSSERQASNSDLLERRSAFLERRRRIRSQ
VRALQRLGSRFENLSGHERSCILSGQHRTGNCNCRTGSRQGNPDEETSTRASISRIVMLA
EALFEVLDEIHHQSAALSSSRPSFSSIGSVPAPREIVERLPAKVYRKPLKYQSDEAAQCY
ICLVEYEEGDCLRILPCHHEFHLTCVDKWLKEIHRVCPLCRGDVCRSDAPSRKVS

Transcript Sequence

Transcript ID

EES18166
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:47789740:47794365:1 gene:SORBI_3009G124800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCAGTAGAGGACGCCATTATTATCGGGCTCTATTATCGGACGAGTAACCATCCAATCAA
ACAACATTCAAATCGACGCAAGGACGCATCGCATCGGGCAAATTTACCGAACCATCTCTC
TCTCTTCTCTTCCTCCCTAGCGTACGTGTAGCCGAGCTACGCTAGCGTCTGAGGAAAGAC
GAAGGAAGCTACAGCGGCCGAGGTCCCCCATTCGCGCCCACCGAGGCGGCGAGGCGTCGC
GCATGCGGCCACCCGCACCCAGGCGCCGTCGCGGGGGAGTGAGGCGTGCAGGCGGAGCAA
TGGCGAGCGGTCTGGGCCGATCCGTGGATCTGTAGGCGCGGGGGGTGTTGGCTGGTGCTG
GTGCGTGATGGGATCTGGGAGCAGCAAGGCCACCACCACCTCCTCCTCCTCCTCCTCCTC
CTCGTCATCGCGCACGTTGGCGGAGGCGGCGGGCGGCGAGGTTAAGAGGCCGAATGGGAG
CGGGAAGGGGAGGAGGGGGAGGAGCCTTTTGCCGAGCTCCTCCTGCTTCCGTGGCTCCAC
GACGCCGCCGTGCGAAGGCGACGCTTCCGCAGCACCGGTGGACGTCGAGTGTAACAAGGG
AGGGGAGACTGCAAGCCTGCCTTCACTCACTCACACTGCAAAGTCTGATGAAGATGTTCT
TGCAATGCCTAAGTCTTATCCCGGCGAAGGGGTAGCAGTACCTTCATCAGATAGTGAAAG
AGATCAAGATGATGATGTGCTACAGAATGCTGCTGCCACTAGCACATCAACAGCGGCCAA
TCAATTGCCAAATCCTTCTGGGAGGTCAAGGCCACGTTTTGGTGTCAACTTTGGGTTGAG
TAGAGCTGTCAGCTTGGGATCATCAGCAGCCTGCTCTATTCTGTCATCTGGCCTCCCGAC
TTCTGCTAATCCAGGTGAAGGTCGGAGAGATGTGGATGACTCTTCTGATACAGGCATCTC
CCAGCAGGGTACTGCACCGACTGCTGGGATTGATTCGACTCTGGATATGCTTAGAGATAG
TGTCACGGCACAAGCTAGAGCAGCTCGTCAGGCTAGGAGAAATCTGCTAGAATCTGAAGA
TGCTAGCTTGAGGAGCTCCTACAGAAGGATGGGGTCTCAGGAACCTTTTGAAGGCAGTGT
TCGGTTTAGCCGAACATTAAGTGTTGGGCGGCTTCGGGACAGAGTTCTCAGGCGGCCTCC
ATTCTCAGATGGGCTATTCACCCCTTCGCTTCTTTATGATAGGGCAGTATGGCCATCTGG
AAACGCTAGTGCTAGGCAAGATTCAGCAGTAATGCAAAGGACTAATTCAGACAGGAGTTC
AGAACCGCGATCTGATCCTTCAACCAACGATATGTACAACTTGAGCTCTGAGAGGCAGGC
CAGTAATAGCGACCTACTGGAGCGCAGATCAGCTTTTCTTGAGAGGAGGAGGAGGATACG
ATCTCAGGTCAGAGCTCTGCAAAGGTTGGGCAGCAGGTTTGAAAATTTATCAGGTCATGA
GAGGTCCTGCATATTATCCGGTCAGCATAGAACAGGAAATTGCAACTGCAGAACAGGTAG
TCGACAAGGCAATCCTGATGAAGAAACTAGCACAAGGGCTAGCATATCGAGAATTGTTAT
GTTAGCAGAAGCACTTTTTGAGGTTCTTGATGAAATTCACCACCAATCTGCTGCATTATC
GTCATCAAGACCATCGTTTTCTTCAATTGGATCCGTTCCTGCTCCAAGGGAGATTGTTGA
GCGTCTTCCTGCAAAAGTGTATAGGAAACCGTTGAAATACCAGAGCGATGAAGCTGCACA
ATGCTATATTTGCCTTGTTGAATATGAAGAGGGAGATTGTCTCCGTATACTTCCATGCCA
TCATGAATTTCATCTAACATGTGTAGATAAATGGCTAAAGGAGATTCACAGGGTTTGTCC
ACTTTGTCGTGGCGATGTCTGCAGATCTGATGCACCGAGTAGAAAGGTCAGCTGATTCTG
TCTCTTGAGAATGCAGCTCTTACAGAGAAAAGTGGAGCTCCTGGCATGGTTCTTTGATCC
AATTCCGATAAAACCTGCAAAACTTCTGCAGATGTTATTTTCATTTCCCCCATCTCTTCT
GGTCAGAACAGCGCAGGATGCTCCTGTATTCTATGGAAAATTCCCATCGCAGTCATCCTC
ATTGTGAAACTGATGACATGCTATGGTGAATTTAGGATTCTGTATGGGGCGAGTTTGTTG
ATATTGGATTGTTGGCTTCCGTTTCCTTATACCGATGTGATCATGTGACGTTTGAACAAA
GTGGGGCGATTGATGTCGGGTGCAGCCAT