Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES18149
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:47258882:47261180:1 gene:SORBI_3009G122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGTTGCTGGTGCTGCTGCCTGGAGTGCATCCATAACATCGCTCCTCTCAACCTTCTC
TTCCTCCACTTCTCCGCCGACCCAGCTCTCCCAGGCGAAGCAGGAGCAGCACCTGCCTCC
ATGGCTTCCATCTCGGTCCCCAACCCGGTCCCTTCTGCGACCCAAGACGCCGAGAACATT
AGGAAAGCAGTGCAAGGATGGGGCACGGACGAGAAGGCGCTGATCGAGATACTGGGCCAC
CGGACGGCGGCGCAGCGCGCGGAGATCGCCGTGGCCTACGAGGGCCTCTGCAACGAATCC
CTCCTCGACAGACTCCACTCCGAGCTCTCCGGCGACTTCCGGAGCGCGATGATGCTGTGG
ACGGCGGACCCGGCGGCGCGTGACGCCAAGCTCGCCCACAAGGCCATGAAGAAGAAGGGC
GAGCGGTACGTGTGGGTGCTCATCGAGGTCGCCTGCGCGTCGACGCCGGACCACCTCGTC
GCCGTCAGGAAGGCCTACCGCGAGGCCTACTCCGCCTCCCTGGAGGAGGACGTCGCCGCG
TGCCCGCTCTACAACAAGGACCCCCTCCTCAAGCAGTTCTTGGTGCGGCTGGTGAGCTCG
TACCGGTACTCCGGCGAGCTCGTCGACGACGAGCTGGCGAGGGCGGAGGCCGCGGAGCTG
CACGACGCGGTGGTGGCCAGGAAGCAGCCGCTGCACGGCGACGTCGTGCGCATCGTCAGC
TCCAGGAGCAAGCCGCAGCTGAAGGCGACGTTCGAGCGGTACAGGCAGGGCCATGGCAAG
GCCATCGACGAGGTGCTCGAGGAAGAACGCCGCAGCGACCAGCTCGCGGCGGTGCTCAAG
ACAGCGGTGTGGTGCTTGACGTCGCCGGAGAAGCACTTCGCGGAGGTGATCCGGAGCTCC
ATCGTCGGGCTCGGGACGGACGAGGAGTCCCTGACGCGGGCGATCGTCTCGCGCGCCGAG
ATCGACATGAAGAAGGTGAAGGAGGAGTACAAGGCCAGGTACCGCAAGACGGTGACCAGC
GACGTCAACGGCGACACGTCCGGATACTACAATGGCATCTTGCTCACTCTAGTCGGGCCC
GAGTGA

Peptide Sequence

PEP ID

EES18149
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:47258882:47261180:1 gene:SORBI_3009G122000 transcript:EES18149 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MCCWCCCLECIHNIAPLNLLFLHFSADPALPGEAGAAPASMASISVPNPVPSATQDAENI
RKAVQGWGTDEKALIEILGHRTAAQRAEIAVAYEGLCNESLLDRLHSELSGDFRSAMMLW
TADPAARDAKLAHKAMKKKGERYVWVLIEVACASTPDHLVAVRKAYREAYSASLEEDVAA
CPLYNKDPLLKQFLVRLVSSYRYSGELVDDELARAEAAELHDAVVARKQPLHGDVVRIVS
SRSKPQLKATFERYRQGHGKAIDEVLEEERRSDQLAAVLKTAVWCLTSPEKHFAEVIRSS
IVGLGTDEESLTRAIVSRAEIDMKKVKEEYKARYRKTVTSDVNGDTSGYYNGILLTLVGP
E

Transcript Sequence

Transcript ID

EES18149
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:47258882:47261180:1 gene:SORBI_3009G122000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTAGCCTAAAAATGAATCGAAACAGCATCATCATCATCAACCACGTCAGGGAACACACC
ATGAAAAATCGGCAGAGCTCATCCTAGGTGGAGGAGCTTTGGGGGTCTCCAGGCGTGTGC
TATGTGTTGCTGGTGCTGCTGCCTGGAGTGCATCCATAACATCGCTCCTCTCAACCTTCT
CTTCCTCCACTTCTCCGCCGACCCAGCTCTCCCAGGCGAAGCAGGAGCAGCACCTGCCTC
CATGGCTTCCATCTCGGTCCCCAACCCGGTCCCTTCTGCGACCCAAGACGCCGAGAACAT
TAGGAAAGCAGTGCAAGGATGGGGCACGGACGAGAAGGCGCTGATCGAGATACTGGGCCA
CCGGACGGCGGCGCAGCGCGCGGAGATCGCCGTGGCCTACGAGGGCCTCTGCAACGAATC
CCTCCTCGACAGACTCCACTCCGAGCTCTCCGGCGACTTCCGGAGCGCGATGATGCTGTG
GACGGCGGACCCGGCGGCGCGTGACGCCAAGCTCGCCCACAAGGCCATGAAGAAGAAGGG
CGAGCGGTACGTGTGGGTGCTCATCGAGGTCGCCTGCGCGTCGACGCCGGACCACCTCGT
CGCCGTCAGGAAGGCCTACCGCGAGGCCTACTCCGCCTCCCTGGAGGAGGACGTCGCCGC
GTGCCCGCTCTACAACAAGGACCCCCTCCTCAAGCAGTTCTTGGTGCGGCTGGTGAGCTC
GTACCGGTACTCCGGCGAGCTCGTCGACGACGAGCTGGCGAGGGCGGAGGCCGCGGAGCT
GCACGACGCGGTGGTGGCCAGGAAGCAGCCGCTGCACGGCGACGTCGTGCGCATCGTCAG
CTCCAGGAGCAAGCCGCAGCTGAAGGCGACGTTCGAGCGGTACAGGCAGGGCCATGGCAA
GGCCATCGACGAGGTGCTCGAGGAAGAACGCCGCAGCGACCAGCTCGCGGCGGTGCTCAA
GACAGCGGTGTGGTGCTTGACGTCGCCGGAGAAGCACTTCGCGGAGGTGATCCGGAGCTC
CATCGTCGGGCTCGGGACGGACGAGGAGTCCCTGACGCGGGCGATCGTCTCGCGCGCCGA
GATCGACATGAAGAAGGTGAAGGAGGAGTACAAGGCCAGGTACCGCAAGACGGTGACCAG
CGACGTCAACGGCGACACGTCCGGATACTACAATGGCATCTTGCTCACTCTAGTCGGGCC
CGAGTGAATCACCATGGATGGATGATTGATCTATATGTAGGTTTGCGACTTGTAGCTTGA
TTGTTCTTGGTTTGATTGAACAAAATGCCTACACAACTGCTGAGTGAAAATGGTGATATT
TGTCCGTTTGGTGATAATAAAACGCCAGATCGATGGGAAAACCAATTAATTAACAAAAGC
TATGGTGTCTCAAGAGTACTATTATCATCCAAGCTTTTTTTTTTGTGTTTGTACACATAA
AGACTGTTGCGATTCGACTGTAATATCACCAAGGCAACAACAGAAGATATGTAATTATAG
ACGGGACCTCTCCTAGTTCAATGAGCTGGTCCAATATATTCGCCTCACTTCTTCCTG