Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES17952
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:9:18425639:18428684:1 gene:SORBI_3009G091000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGCCTGCCGCCGCGACACCTTTCTCGCTGTCATCATTGGGATCAATGCAGTCATT
TTGGCTTCCGCGGCGAAGTACAAGCCGCCGGAGTCCATATTGGTGGATTGCGGTTCAGCA
AAAGAGGGCCAGGACGCCGATGGGAGGAAATGGGTGACTGACCAAGGCAGCAACTGGCTC
ATTGATGGCGGGAAGTCATCCATCATGGCCGATGCCGATGTGCAGGATCCATCGCTTCCC
TCACCTGTCCCGTACATGTCGGCACGGGTGTTCACCAAGGAAGCCGTGTATAACTTCTCC
ATTGGTGACACCGATAGGCACTGGCTGCGCCTCCACTTCTACCCAGCAGCCTACCATGGC
GTCCCGGCAGAACAATTCTTCTTCTCAGTCTCTACGTCCACCGGAATCACGCTGCTCCGC
AACTTCAGCGTGTACATCACTGCCAAGGCACTTAGCCAGGCATACATCATCAGGGAGTTC
ACACTGCCACCGATGACGGATGGCAAGCTGTCGCTCACATTCACACCAACCGCAATGAAC
AACGCATCATATGCCTTCGTCAATGGCATCGAGATCATCTCCATGCCCGACATCTTTGCT
GATCCGGCCACGATGGTTGGCTTGAGTGACCAGACCGTAGACACCGCCGCTAGCAGCTTA
CAGACGATGTACAGGTTGAATGTCGGTGGTTCTTACATTGCACCGACAAACGACTCTGGT
CTATCACGAGATTGGTATGATGACACGCCATACCTCTATGGAGCTGCTGTTGGTGTGACA
TATAAAGCTGATGACAAGGTCCAGATAAAGTTCTCGAGCCCTGAGGCAGAGTATGCAGCA
CCGACGAGCCTCTACCTCAGCAGCAGGTCAATGGGCCCTAATCCAAAGGTGAATCAGAAC
TACAATCTGACCTGGGTGTTTGAGGTTGACAGTAACTTCACATACATCGTTCGGCTCCAC
TTTTGTGAGTTGTTGCTTACCAAGGTGAATCAACGGGCGTTTGACATCTACATCAACAAC
AAAACAGCACAGGCAGATGCCGATGTCATCGGGTGGACATCGGAGAAGGATGTGCCCGTG
TACAAGGACTACGCGACGTTCATGCCTGACAGTCCAGGTGATAAGATCCTATGGATCGCA
CTACACCCTTCCGTGTCAATGAAGCCAGAGTTCTACGATGCTGTCCTGAATGGTCTCGAG
ATATTCAAGATGAGTGATAGCTCTGGTAACCTTGCTGGTCCAAATCCTGACCCGTCCAGA
ATGCTAGAGGAAGCAGAGATGGATGTGACAACGGGGAAATTCAAAGCCAAGCCAAGCAAC
CTCAGGGCCATGGTGATTGGCGGTGCAGCTGGCGGTGCAGCAGCCTTTGGGATAGTAGCA
GCCATATGTGTCGTGGCTTATCATTCAAAGAAGAGGCGGGTGCTAGGTAACAGCGTGTCC
CATTCCTCAGGATGGCTGCCAGTGTATGGTGGCAACTCACATACAAACGCCAGCAAGTCG
TCTGGCGGCAAGAGCGCGGCACTCAACCCAAACATCACCGCCATGTGTCGGCACTTCTCG
TTCCAGGAGATTAAGGCAGCAACGAAGAACTTCGATGAGTCACTAGTCATTGGTGTGGGC
GGGTTTGGCAAGGTGTACAGGGGCATCGTTGATGGCGACACCAAGGTGGCGATCAAGCGG
AGCAATCCATCATCTGAGCAGGGTGTTCTGGAATTCCAAACTGAGATTGAGATGCTCTCG
AAGCTTCGGCACAAGCACCTTGTGTCGCTTATCGGCTGCTGCGAGGATGACGGCGAGATG
ATCCTTGTGTACGACTACATGGCACATGGCACCCTACGGGAGCACCTGTACAAGAGTGGA
AAGCCAGCACTATCATGGCGGCAGCGCCTTGAGATCACCATCGGAGCCGCACGAGGCCTG
CATTACCTCCACACTGGCGCCAAGTACACCATCATCCACCGTGACGTCAAGACGACCAAC
ATTCTGGTCGATGAGAACTGGGTGGCCAAGGTTTCCGACTTTGGTTTATCCAAGACTGGC
CCGACGGCGATGAACCAAACGCACGTTAGCACCATGGTGAAGGGCAGCTTTGGATATCTC
GACCCAGAGTACTTCCGGCGGCAACAACTCACAGAGAAGTCTGACGTCTACTCGTACGGT
GTGGTGCTCTTTGAGGTGCTCTGCGCACGCCCTGCACTGAACCCGAGCCTACCAAGGGAG
CAGGTTAGCCTTGCCGACCATGCCTTGAGCTGCCAGAGGAAGGGAACACTACAAGATATA
ATTGATCCGGTATTGAAGGGCAAGATAGCACCAGACTGCCTGAAGAAGTATGCGGAGACG
GCAGAGAAATGCCTGGCTGACCATGGAGTAGACCGACCTTCGATGGGCGACGTGCTATGG
AATCTTGAATTTGCATTGCAGATGCAGGATACCTTTGAGAATGGTGGGAAGCCAGAGGGG
GAAGGAAGCATGAGCAACAGTAGTACTGTGTCTATGGCGGACAGCATGGCTGCCTCAGCC
GCAGCGCTCGAGCTAATCAGCGAGGACATGGACGAGGAGGACATTGCCAACAGTGTGGTG
TTCTCGCAGCTCGTTCACCCAACTGGCCGGTAA

Peptide Sequence

PEP ID

EES17952
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:9:18425639:18428684:1 gene:SORBI_3009G091000 transcript:EES17952 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAACRRDTFLAVIIGINAVILASAAKYKPPESILVDCGSAKEGQDADGRKWVTDQGSNWL
IDGGKSSIMADADVQDPSLPSPVPYMSARVFTKEAVYNFSIGDTDRHWLRLHFYPAAYHG
VPAEQFFFSVSTSTGITLLRNFSVYITAKALSQAYIIREFTLPPMTDGKLSLTFTPTAMN
NASYAFVNGIEIISMPDIFADPATMVGLSDQTVDTAASSLQTMYRLNVGGSYIAPTNDSG
LSRDWYDDTPYLYGAAVGVTYKADDKVQIKFSSPEAEYAAPTSLYLSSRSMGPNPKVNQN
YNLTWVFEVDSNFTYIVRLHFCELLLTKVNQRAFDIYINNKTAQADADVIGWTSEKDVPV
YKDYATFMPDSPGDKILWIALHPSVSMKPEFYDAVLNGLEIFKMSDSSGNLAGPNPDPSR
MLEEAEMDVTTGKFKAKPSNLRAMVIGGAAGGAAAFGIVAAICVVAYHSKKRRVLGNSVS
HSSGWLPVYGGNSHTNASKSSGGKSAALNPNITAMCRHFSFQEIKAATKNFDESLVIGVG
GFGKVYRGIVDGDTKVAIKRSNPSSEQGVLEFQTEIEMLSKLRHKHLVSLIGCCEDDGEM
ILVYDYMAHGTLREHLYKSGKPALSWRQRLEITIGAARGLHYLHTGAKYTIIHRDVKTTN
ILVDENWVAKVSDFGLSKTGPTAMNQTHVSTMVKGSFGYLDPEYFRRQQLTEKSDVYSYG
VVLFEVLCARPALNPSLPREQVSLADHALSCQRKGTLQDIIDPVLKGKIAPDCLKKYAET
AEKCLADHGVDRPSMGDVLWNLEFALQMQDTFENGGKPEGEGSMSNSSTVSMADSMAASA
AALELISEDMDEEDIANSVVFSQLVHPTGR

Transcript Sequence

Transcript ID

EES17952
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:9:18425639:18428684:1 gene:SORBI_3009G091000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTGGGTCAAGAATCCCTTTGGCCCCTTATTCCCCGAAACAAACATCCCTCTTGGAGGAG
GAGATTACAGAGGCATGCACACCTCTGTTCTTCTCCCTCCTCTCGTATTCCTCCCGAATT
CATTTGCTCAACACCGCATGGCCTAACCAAACACCCTCCTCTACACCTCTGCACCGGCGA
ATTAAACTGTCCTGACTGGTCCGTCCGGCGAACATGGCAGCCTGCCGCCGCGACACCTTT
CTCGCTGTCATCATTGGGATCAATGCAGTCATTTTGGCTTCCGCGGCGAAGTACAAGCCG
CCGGAGTCCATATTGGTGGATTGCGGTTCAGCAAAAGAGGGCCAGGACGCCGATGGGAGG
AAATGGGTGACTGACCAAGGCAGCAACTGGCTCATTGATGGCGGGAAGTCATCCATCATG
GCCGATGCCGATGTGCAGGATCCATCGCTTCCCTCACCTGTCCCGTACATGTCGGCACGG
GTGTTCACCAAGGAAGCCGTGTATAACTTCTCCATTGGTGACACCGATAGGCACTGGCTG
CGCCTCCACTTCTACCCAGCAGCCTACCATGGCGTCCCGGCAGAACAATTCTTCTTCTCA
GTCTCTACGTCCACCGGAATCACGCTGCTCCGCAACTTCAGCGTGTACATCACTGCCAAG
GCACTTAGCCAGGCATACATCATCAGGGAGTTCACACTGCCACCGATGACGGATGGCAAG
CTGTCGCTCACATTCACACCAACCGCAATGAACAACGCATCATATGCCTTCGTCAATGGC
ATCGAGATCATCTCCATGCCCGACATCTTTGCTGATCCGGCCACGATGGTTGGCTTGAGT
GACCAGACCGTAGACACCGCCGCTAGCAGCTTACAGACGATGTACAGGTTGAATGTCGGT
GGTTCTTACATTGCACCGACAAACGACTCTGGTCTATCACGAGATTGGTATGATGACACG
CCATACCTCTATGGAGCTGCTGTTGGTGTGACATATAAAGCTGATGACAAGGTCCAGATA
AAGTTCTCGAGCCCTGAGGCAGAGTATGCAGCACCGACGAGCCTCTACCTCAGCAGCAGG
TCAATGGGCCCTAATCCAAAGGTGAATCAGAACTACAATCTGACCTGGGTGTTTGAGGTT
GACAGTAACTTCACATACATCGTTCGGCTCCACTTTTGTGAGTTGTTGCTTACCAAGGTG
AATCAACGGGCGTTTGACATCTACATCAACAACAAAACAGCACAGGCAGATGCCGATGTC
ATCGGGTGGACATCGGAGAAGGATGTGCCCGTGTACAAGGACTACGCGACGTTCATGCCT
GACAGTCCAGGTGATAAGATCCTATGGATCGCACTACACCCTTCCGTGTCAATGAAGCCA
GAGTTCTACGATGCTGTCCTGAATGGTCTCGAGATATTCAAGATGAGTGATAGCTCTGGT
AACCTTGCTGGTCCAAATCCTGACCCGTCCAGAATGCTAGAGGAAGCAGAGATGGATGTG
ACAACGGGGAAATTCAAAGCCAAGCCAAGCAACCTCAGGGCCATGGTGATTGGCGGTGCA
GCTGGCGGTGCAGCAGCCTTTGGGATAGTAGCAGCCATATGTGTCGTGGCTTATCATTCA
AAGAAGAGGCGGGTGCTAGGTAACAGCGTGTCCCATTCCTCAGGATGGCTGCCAGTGTAT
GGTGGCAACTCACATACAAACGCCAGCAAGTCGTCTGGCGGCAAGAGCGCGGCACTCAAC
CCAAACATCACCGCCATGTGTCGGCACTTCTCGTTCCAGGAGATTAAGGCAGCAACGAAG
AACTTCGATGAGTCACTAGTCATTGGTGTGGGCGGGTTTGGCAAGGTGTACAGGGGCATC
GTTGATGGCGACACCAAGGTGGCGATCAAGCGGAGCAATCCATCATCTGAGCAGGGTGTT
CTGGAATTCCAAACTGAGATTGAGATGCTCTCGAAGCTTCGGCACAAGCACCTTGTGTCG
CTTATCGGCTGCTGCGAGGATGACGGCGAGATGATCCTTGTGTACGACTACATGGCACAT
GGCACCCTACGGGAGCACCTGTACAAGAGTGGAAAGCCAGCACTATCATGGCGGCAGCGC
CTTGAGATCACCATCGGAGCCGCACGAGGCCTGCATTACCTCCACACTGGCGCCAAGTAC
ACCATCATCCACCGTGACGTCAAGACGACCAACATTCTGGTCGATGAGAACTGGGTGGCC
AAGGTTTCCGACTTTGGTTTATCCAAGACTGGCCCGACGGCGATGAACCAAACGCACGTT
AGCACCATGGTGAAGGGCAGCTTTGGATATCTCGACCCAGAGTACTTCCGGCGGCAACAA
CTCACAGAGAAGTCTGACGTCTACTCGTACGGTGTGGTGCTCTTTGAGGTGCTCTGCGCA
CGCCCTGCACTGAACCCGAGCCTACCAAGGGAGCAGGTTAGCCTTGCCGACCATGCCTTG
AGCTGCCAGAGGAAGGGAACACTACAAGATATAATTGATCCGGTATTGAAGGGCAAGATA
GCACCAGACTGCCTGAAGAAGTATGCGGAGACGGCAGAGAAATGCCTGGCTGACCATGGA
GTAGACCGACCTTCGATGGGCGACGTGCTATGGAATCTTGAATTTGCATTGCAGATGCAG
GATACCTTTGAGAATGGTGGGAAGCCAGAGGGGGAAGGAAGCATGAGCAACAGTAGTACT
GTGTCTATGGCGGACAGCATGGCTGCCTCAGCCGCAGCGCTCGAGCTAATCAGCGAGGAC
ATGGACGAGGAGGACATTGCCAACAGTGTGGTGTTCTCGCAGCTCGTTCACCCAACTGGC
CGGTAAGGTGTATATGGGACGTGGATGCTGAAATTTATCGTGCATGCGTTTGTTGTTCAT
TGGGATTTGGGATTCATCTCTTCCTGTCAATATGTACTCAGATCATATTGTGCGTATGTG
TGTATCATTGTTGGTTGATTCTTTAATTTGGTCCCTTTTGATGTACTTTCGTGGGCCATG
AAAACGGGGAACCATGGTAAGAACTTAGGATTTCTGTAAGATGCAA