Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES17498
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:62397559:62401674:-1 gene:SORBI_3008G190000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACAAGGAGAGAGAGAGAGAAGCCGACCACCGCCGCCGCCTCCGCCTCCGACTCCGCC
ATGGACAAGATCGCCGCCACGGCCTTCGCCCTTCTCCTCTGCCTCTGCTTCTCCTCCACG
CCCGCCGCCATGGCCCTCACCCCGGACGGCGAGGCGTTGCTGGAGCTCAAGCTGGCCTTC
AACGCCACCGTGCAGCGTCTCACCAGCTGGCGGCCCAGTGACCCTAACCCCTGCGGTTGG
GAGGGCATCTCCTGCTCCGTTCCCGACCTCAGGGTCCAATCCATAAACCTCCCCTACATG
CAGCTCGGGGGCATCATTTCGCCCAGCATCGGGAGGCTCGACAAGCTGCAGAGACTAGCT
CTGCACCAGAACAGCTTGCACGGCCCAATCCCTGCAGAGATCAAGAACTGCACCGAGCTC
AGGGCAATTTACCTGAGAGCCAACTACCTGCAAGGAGGCATCCCTTCAGAGATTGGCGAG
CTCTTGCACCTCACAATCTTGGACCTATCAAGCAATCTGTTGAGGGGCACAATACCGGCC
TCGATTGGAAGTCTTACTCACCTTCGCTTTCTGAACCTGTCTACAAATTTCTTCTCCGGA
GAGATCCCAAATGTTGGTGTCCTCGGAACCTTCAAAAGCAGCTCGTTCGTTGGAAATCTG
GAGCTTTGTGGCTTGTCCATCCAGAAGGCTTGCCGTGGAACACTCGGCTTTCCTGCTGTG
CTGCCACACTCCGATCCGCTCTCTTCAGCTGGCGTTTCTCCAATCAATAACAACAAGACA
TCACACTTTCTGAATGGCATCGTGATCGGCTCAATGTCAACCTTGGCTCTTGCCTTGATA
GCTGTACTCGGATTCCTATGGGTTTGCTTGCTGTCCAGGAAAAAGAGCATTGGTGGAAAC
TATGTAAAGATGGACAAGCAAACCGTTCCTGATGGTGCAAAGCTTGTGACATACCAGTGG
AACCTTCCATATTCGTCAAGTGAGATTATTAGAAGGTTGGAGCTGCTTGATGAAGAAGAT
GTGGTTGGCTGTGGGGGATTTGGCACAGTGTACAAAATGGTGATGGATGATGGCACGTCA
TTTGCCGTCAAGAGGATCGACCTCAGCCGCGAAAGTCGTGACAGGACCTTCGAGAAGGAG
CTTGAGATTCTGGGCAGCATCAGGCACATAAATCTTGTCAATTTGCGAGGCTACTGCAGG
CTCGCCACAGCAAAGCTACTCATATACGATTTTGTTGAACTGGGCAGCTTGGATTGCTAC
CTTCATGGAGATGAACAAGAGGACCAGCCATTGAACTGGAACGCGCGCATGAAAATCGCC
CTTGGGTCGGCTCGAGGTCTGGCATATCTCCACCATGATTGCTCGCCTGGGATTGTGCAT
AGGGACATCAAGGCCAGTAACATCCTGCTAGATAGAAGCTTGGAGCCTCGTGTCTCTGAT
TTTGGCCTTGCAAGGCTGCTTGTAGACAATGCTGCCCATGTTACCACTGTCGTGGCGGGC
ACCTTTGGATACCTAGCACCAGAGTACTTGCAAAATGGGCATGCTACTGAAAAATCAGAC
GTGTATAGCTTTGGAGTGCTTTTGCTGGAGCTGGTGACCGGAAAGAGGCCAACCGACTCA
TGCTTCATCAAGAAGGGACTGAACATTGTTGGCTGGCTGAACACCCTAACTGGGGAGCAC
CGGTTGGAGGATATCATCGATGAGCAATGCGGTGACGTGGAGGTGGAAGCCGTGGAAGCC
ATCCTGGACATCGCGGCGATGTGCACCGACGCAGACCCAGGGCAGCGGCCATCGATGAGT
GCCGTGCTGAAGATGCTGGAGGAGGAGATCCTGTCCCCCTGCATGAGCGAGCTGTGCTAC
GAGCAGCACCTGGAGCTCTGA

Peptide Sequence

PEP ID

EES17498
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:62397559:62401674:-1 gene:SORBI_3008G190000 transcript:EES17498 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTRREREKPTTAAASASDSAMDKIAATAFALLLCLCFSSTPAAMALTPDGEALLELKLAF
NATVQRLTSWRPSDPNPCGWEGISCSVPDLRVQSINLPYMQLGGIISPSIGRLDKLQRLA
LHQNSLHGPIPAEIKNCTELRAIYLRANYLQGGIPSEIGELLHLTILDLSSNLLRGTIPA
SIGSLTHLRFLNLSTNFFSGEIPNVGVLGTFKSSSFVGNLELCGLSIQKACRGTLGFPAV
LPHSDPLSSAGVSPINNNKTSHFLNGIVIGSMSTLALALIAVLGFLWVCLLSRKKSIGGN
YVKMDKQTVPDGAKLVTYQWNLPYSSSEIIRRLELLDEEDVVGCGGFGTVYKMVMDDGTS
FAVKRIDLSRESRDRTFEKELEILGSIRHINLVNLRGYCRLATAKLLIYDFVELGSLDCY
LHGDEQEDQPLNWNARMKIALGSARGLAYLHHDCSPGIVHRDIKASNILLDRSLEPRVSD
FGLARLLVDNAAHVTTVVAGTFGYLAPEYLQNGHATEKSDVYSFGVLLLELVTGKRPTDS
CFIKKGLNIVGWLNTLTGEHRLEDIIDEQCGDVEVEAVEAILDIAAMCTDADPGQRPSMS
AVLKMLEEEILSPCMSELCYEQHLEL

Transcript Sequence

Transcript ID

EES17498
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:62397559:62401674:-1 gene:SORBI_3008G190000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTCCCTTCTTCCTTCTCTCGCACACTCCACTCCACTCCACTGCTCCCCTCTCCTCCTTCA
AATCCTCTCCTCGCACCACCCAATGACAAGGAGAGAGAGAGAGAAGCCGACCACCGCCGC
CGCCTCCGCCTCCGACTCCGCCATGGACAAGATCGCCGCCACGGCCTTCGCCCTTCTCCT
CTGCCTCTGCTTCTCCTCCACGCCCGCCGCCATGGCCCTCACCCCGGACGGCGAGGCGTT
GCTGGAGCTCAAGCTGGCCTTCAACGCCACCGTGCAGCGTCTCACCAGCTGGCGGCCCAG
TGACCCTAACCCCTGCGGTTGGGAGGGCATCTCCTGCTCCGTTCCCGACCTCAGGGTCCA
ATCCATAAACCTCCCCTACATGCAGCTCGGGGGCATCATTTCGCCCAGCATCGGGAGGCT
CGACAAGCTGCAGAGACTAGCTCTGCACCAGAACAGCTTGCACGGCCCAATCCCTGCAGA
GATCAAGAACTGCACCGAGCTCAGGGCAATTTACCTGAGAGCCAACTACCTGCAAGGAGG
CATCCCTTCAGAGATTGGCGAGCTCTTGCACCTCACAATCTTGGACCTATCAAGCAATCT
GTTGAGGGGCACAATACCGGCCTCGATTGGAAGTCTTACTCACCTTCGCTTTCTGAACCT
GTCTACAAATTTCTTCTCCGGAGAGATCCCAAATGTTGGTGTCCTCGGAACCTTCAAAAG
CAGCTCGTTCGTTGGAAATCTGGAGCTTTGTGGCTTGTCCATCCAGAAGGCTTGCCGTGG
AACACTCGGCTTTCCTGCTGTGCTGCCACACTCCGATCCGCTCTCTTCAGCTGGCGTTTC
TCCAATCAATAACAACAAGACATCACACTTTCTGAATGGCATCGTGATCGGCTCAATGTC
AACCTTGGCTCTTGCCTTGATAGCTGTACTCGGATTCCTATGGGTTTGCTTGCTGTCCAG
GAAAAAGAGCATTGGTGGAAACTATGTAAAGATGGACAAGCAAACCGTTCCTGATGGTGC
AAAGCTTGTGACATACCAGTGGAACCTTCCATATTCGTCAAGTGAGATTATTAGAAGGTT
GGAGCTGCTTGATGAAGAAGATGTGGTTGGCTGTGGGGGATTTGGCACAGTGTACAAAAT
GGTGATGGATGATGGCACGTCATTTGCCGTCAAGAGGATCGACCTCAGCCGCGAAAGTCG
TGACAGGACCTTCGAGAAGGAGCTTGAGATTCTGGGCAGCATCAGGCACATAAATCTTGT
CAATTTGCGAGGCTACTGCAGGCTCGCCACAGCAAAGCTACTCATATACGATTTTGTTGA
ACTGGGCAGCTTGGATTGCTACCTTCATGGAGATGAACAAGAGGACCAGCCATTGAACTG
GAACGCGCGCATGAAAATCGCCCTTGGGTCGGCTCGAGGTCTGGCATATCTCCACCATGA
TTGCTCGCCTGGGATTGTGCATAGGGACATCAAGGCCAGTAACATCCTGCTAGATAGAAG
CTTGGAGCCTCGTGTCTCTGATTTTGGCCTTGCAAGGCTGCTTGTAGACAATGCTGCCCA
TGTTACCACTGTCGTGGCGGGCACCTTTGGATACCTAGCACCAGAGTACTTGCAAAATGG
GCATGCTACTGAAAAATCAGACGTGTATAGCTTTGGAGTGCTTTTGCTGGAGCTGGTGAC
CGGAAAGAGGCCAACCGACTCATGCTTCATCAAGAAGGGACTGAACATTGTTGGCTGGCT
GAACACCCTAACTGGGGAGCACCGGTTGGAGGATATCATCGATGAGCAATGCGGTGACGT
GGAGGTGGAAGCCGTGGAAGCCATCCTGGACATCGCGGCGATGTGCACCGACGCAGACCC
AGGGCAGCGGCCATCGATGAGTGCCGTGCTGAAGATGCTGGAGGAGGAGATCCTGTCCCC
CTGCATGAGCGAGCTGTGCTACGAGCAGCACCTGGAGCTCTGAGCTGAGAGGAGGAAGCC
TGACTATGATGCTAGTAGCTGCTGCTCAAGCGCGTGCATGCATGAATGATGGATGAGATG
AGACTGAGTAGGAAGCAAAAGTTTTGTAGATACAATGGTGATGCTGAACCGTGTAGTGTA
GGTGTTTATGTGCTGGCTGGACAAGTGCAGATTCTCTCATCTTCCTTTTTTTGTGCTCAG
CCTCAGCTCAAGCAAAGTCAAAGTGGTTCTTGGCACAGAACCAACAATCTAATCGGCATG
TTCTGTTGTACATAGATCTTCTCTCCTTTTTTTTTTGGTTCTTTTTTGCCTTTTATTTTC
CTCAGTTTTCTTTTGTGGCGCCTTTATCTTTGTACCGGTAATTTTCTGACTAGATTGTCT
GCACTGTTGTGGCTGCGATGC