Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES17441
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:61304898:61308463:-1 gene:SORBI_3008G179600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTACAAGTCTTGGAATGGACGAATATGCAGAACTGGAGGTCTCTATGATGGATCCC
ACTGACAAGAAGCCTGCCTTCAGAGGCTTGAAACTGTACGTGAAAGAACTAGATTCAAAG
ACACTTCCTCCGTTTCTTGCTCGTTTGTGTTCTCCCGACAAGCCTTCCTCTTACTCTGAG
GATGAGATCCTGTGCATTTTCGAGACTGCGTCTGAAGTTCATGGCCGCAGCATTGTGCCG
CACATTGGACAGATTGTTTCAGCAGTTGTCAAGATCATGGCGTCAAATTCAAAGCCCTTG
CATAGTGCTGGTTGCTCCAAGGTAGTTTGCACATTATCCCGCTACTGCATTGATCCCCTG
GGTAGAGAAGAAGAGAAATATGAGATCATGGGCTCCCTTTGCCGTCCCCTATCTGATAGC
TTAATGAATACTAACAAGAGCATCTCTTCTGGTTCGGCTCTTTGTATTGCTGCGCTTGTC
CAGTCCAACAATTGGCAATTTGCATCTAATGAGTTGGTTAATGATGTTTGCTTGAAAGTG
TCGGGCGCTCTAGAGGAGGCTCACTGCCAGACTGTTGTTCACGTAAGCTTGGTGGTTGCT
CTGTTAAAACACAATCCTTTGACACTGGAGCCTTATGGACGATCATTGATAAGGTCAGGC
TTGCAGATATTGGACCACAGCACTAAGGCAAACAATTCTCAGATGATTATGTCATCAATT
CAGATGATATATTTGATCATGAGAAGCTTGAATGTGAGGATTATAAATTCTGAGATCAGT
AGCATTATCCATGCTTTGGAGCACTTCCAAGATGGCTTTGTTTCAGATATATGCGCTGCA
GCTTTCCAGGCAACCGAGACTGCTAAGTTACTTGGGAGGCAGGAGGAACATGGAGCCCAC
AAAAATGTCAGTCCTTTGGGAAGCTGTAGTGGTGGGAACAGCAGGAAGGGGTCAAATTCT
CCAATTGATCATGCAGATATCAGAGACAGTGGATCTAGTGGATCTCCTCGTGAGTTACAA
TCTGTCCGTTGTTTTAGTGACTTCAATTCTCAGCCACCAGTTGGAGAATGCACTGGTATT
CTTGGAACTTCGCGTGCAAGGCGGCGACTTTGGAGTTATGGAACTGACTTTTCACATGGG
ATGTCCAACGATGAGCTTTTCCACACTTCGGCACGTGATTATCATGAAAATCTGGGTATC
ATAGCACAATCTGATTCTGCTGATCTCGTCAAGTCAAGTAGGAGGCGCTCTGATGTGTTG
ACAAGAATTGGTGATCCATGTCCTACTTGTTTAACACCCAGAGCTACTAATCAGGCGCGC
AGGCGACAAGCTTTGTCAACTCCAAGGAAGCAGCTCCAGTCTTTGACCTATTGCAGTGAT
TCAGAAAGAGATGGCCATCGCCTACCTCCAAGATCAGCTTCAAGGTTGATGCATCGCCCA
GACCATCTTTTGTTTCAAAAGAATTTTCAAAGTGAGGAAAGGAAAGGCTACTGCAACTCG
CGACAGAGGAACCAATTGCGTACACAGACCACAGACTTGCTGAGCGAAGACTTGAAGTTC
CCCACCAGCAGCAGGCGTTCTGATAGTGCACGGGCTCCTCCATGTGAAGAACGCCAATGT
GATGCTGCTGCTGAACATCAGAAGGTGACTGGGATGGAGAAAAAAGAAACAAACTGTCGT
CGAAGCAATCGATTAACTCTATTTATCTGTGCCATGGTCTTCGCTGTGTTGTTGCTAGCT
TTGTGGAAGCAGCAGGACCCCAGTAAGGAACTGTACTTCGTGCCTACTTAG

Peptide Sequence

PEP ID

EES17441
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:61304898:61308463:-1 gene:SORBI_3008G179600 transcript:EES17441 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATSLGMDEYAELEVSMMDPTDKKPAFRGLKLYVKELDSKTLPPFLARLCSPDKPSSYSE
DEILCIFETASEVHGRSIVPHIGQIVSAVVKIMASNSKPLHSAGCSKVVCTLSRYCIDPL
GREEEKYEIMGSLCRPLSDSLMNTNKSISSGSALCIAALVQSNNWQFASNELVNDVCLKV
SGALEEAHCQTVVHVSLVVALLKHNPLTLEPYGRSLIRSGLQILDHSTKANNSQMIMSSI
QMIYLIMRSLNVRIINSEISSIIHALEHFQDGFVSDICAAAFQATETAKLLGRQEEHGAH
KNVSPLGSCSGGNSRKGSNSPIDHADIRDSGSSGSPRELQSVRCFSDFNSQPPVGECTGI
LGTSRARRRLWSYGTDFSHGMSNDELFHTSARDYHENLGIIAQSDSADLVKSSRRRSDVL
TRIGDPCPTCLTPRATNQARRRQALSTPRKQLQSLTYCSDSERDGHRLPPRSASRLMHRP
DHLLFQKNFQSEERKGYCNSRQRNQLRTQTTDLLSEDLKFPTSSRRSDSARAPPCEERQC
DAAAEHQKVTGMEKKETNCRRSNRLTLFICAMVFAVLLLALWKQQDPSKELYFVPT

Transcript Sequence

Transcript ID

EES17441
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:61304898:61308463:-1 gene:SORBI_3008G179600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCCACCAACCCCCCCGGAGCCGGAGCGTCCAGTGCAGCGGCAGCGGCAGCGGCGACCCC
ATCTCCCCGCCGCAACAACTCCTCGCTCGCCGCCTGGGCATCGGCGTGCCTCTCCTCCGC
CTCCTCCTCTGCCGCTTCGCCGGTCTCGGGGATCCACCGGGATTCGTCGGTAAGGAACAA
CACAACCCTAACCTCCTCTGCTCTCTGCCGGATGTTGTTGTTCCCCGAAGCGTGGGGTTT
GGTCTGCGGGATCTTCGAACTGCAACCCGAACAGTTCTCGAGTCTCGATCACTTAGACTA
GGGGAGATCTGGGGCTGGTGCGGTCTCCTTGCTTCGTGTTGGTGCGGAAATGGAATCCGC
GGCGTCCACGGTTCTTGGCTTCTTGTTCGGCTCGATTGTTTTTTTTTCTCTTCTTCGTCG
CTAGCGCGCGCAAGATGAATGAAGATTGGTCCTTGTTTGGTTGGCGTATCAGTGGATTTC
GTTTTCTTTGGCGCGGGTGCCGTTTACTTTGAATTCTTGGGTGGGTTCGAATGAGGTTTC
TGGGGCTAGTCATTCTCCAGCCTGCAGGGGCGGTGTTCTTCCGATCATGTTTGGCGAGCA
TTAACTCACTGTACCGTTTCTTTGAGTCATGGATAGAAATCTTTGCTTTTTGATGAAAAG
AAATTTGTATCATATCGCTTTTTACTTCATTATTACTCTGGGACTGAACCTCTGAATGAA
TGCCTAAAGTCACTGTCGTGGTCTCTGTAACAGTCACTACTTGGTCACCCTTTTTTTTTC
TTTCAAAAAATTTTGGCACTATGTGTTCTTCTTCTTGTTATAGAACATAGATAGAAGAAG
CATACTTTGTTTATATTGTTAGTGGGCACCGAATCTGAACAAGTTTTATGTCTTCATTTT
GGTATGCTTTAACTGAAGAAACCATGTGTTGATCGATTTATTCTCTCCCCAAAACTACAT
GCTGTGTTTACCTTTATTAACAGCCTAAACATATGTGCTGATCGATTTATTTGCTCCCCA
AAAATACATGATGTGCTTACCTTTATTAACAGCCTGTATTTTGTTTCTTTAATGAATCCA
GTGTATCAGTGTATGCAATGGCTACAAGTCTTGGAATGGACGAATATGCAGAACTGGAGG
TCTCTATGATGGATCCCACTGACAAGAAGCCTGCCTTCAGAGGCTTGAAACTGTACGTGA
AAGAACTAGATTCAAAGACACTTCCTCCGTTTCTTGCTCGTTTGTGTTCTCCCGACAAGC
CTTCCTCTTACTCTGAGGATGAGATCCTGTGCATTTTCGAGACTGCGTCTGAAGTTCATG
GCCGCAGCATTGTGCCGCACATTGGACAGATTGTTTCAGCAGTTGTCAAGATCATGGCGT
CAAATTCAAAGCCCTTGCATAGTGCTGGTTGCTCCAAGGTAGTTTGCACATTATCCCGCT
ACTGCATTGATCCCCTGGGTAGAGAAGAAGAGAAATATGAGATCATGGGCTCCCTTTGCC
GTCCCCTATCTGATAGCTTAATGAATACTAACAAGAGCATCTCTTCTGGTTCGGCTCTTT
GTATTGCTGCGCTTGTCCAGTCCAACAATTGGCAATTTGCATCTAATGAGTTGGTTAATG
ATGTTTGCTTGAAAGTGTCGGGCGCTCTAGAGGAGGCTCACTGCCAGACTGTTGTTCACG
TAAGCTTGGTGGTTGCTCTGTTAAAACACAATCCTTTGACACTGGAGCCTTATGGACGAT
CATTGATAAGGTCAGGCTTGCAGATATTGGACCACAGCACTAAGGCAAACAATTCTCAGA
TGATTATGTCATCAATTCAGATGATATATTTGATCATGAGAAGCTTGAATGTGAGGATTA
TAAATTCTGAGATCAGTAGCATTATCCATGCTTTGGAGCACTTCCAAGATGGCTTTGTTT
CAGATATATGCGCTGCAGCTTTCCAGGCAACCGAGACTGCTAAGTTACTTGGGAGGCAGG
AGGAACATGGAGCCCACAAAAATGTCAGTCCTTTGGGAAGCTGTAGTGGTGGGAACAGCA
GGAAGGGGTCAAATTCTCCAATTGATCATGCAGATATCAGAGACAGTGGATCTAGTGGAT
CTCCTCGTGAGTTACAATCTGTCCGTTGTTTTAGTGACTTCAATTCTCAGCCACCAGTTG
GAGAATGCACTGGTATTCTTGGAACTTCGCGTGCAAGGCGGCGACTTTGGAGTTATGGAA
CTGACTTTTCACATGGGATGTCCAACGATGAGCTTTTCCACACTTCGGCACGTGATTATC
ATGAAAATCTGGGTATCATAGCACAATCTGATTCTGCTGATCTCGTCAAGTCAAGTAGGA
GGCGCTCTGATGTGTTGACAAGAATTGGTGATCCATGTCCTACTTGTTTAACACCCAGAG
CTACTAATCAGGCGCGCAGGCGACAAGCTTTGTCAACTCCAAGGAAGCAGCTCCAGTCTT
TGACCTATTGCAGTGATTCAGAAAGAGATGGCCATCGCCTACCTCCAAGATCAGCTTCAA
GGTTGATGCATCGCCCAGACCATCTTTTGTTTCAAAAGAATTTTCAAAGTGAGGAAAGGA
AAGGCTACTGCAACTCGCGACAGAGGAACCAATTGCGTACACAGACCACAGACTTGCTGA
GCGAAGACTTGAAGTTCCCCACCAGCAGCAGGCGTTCTGATAGTGCACGGGCTCCTCCAT
GTGAAGAACGCCAATGTGATGCTGCTGCTGAACATCAGAAGGTGACTGGGATGGAGAAAA
AAGAAACAAACTGTCGTCGAAGCAATCGATTAACTCTATTTATCTGTGCCATGGTCTTCG
CTGTGTTGTTGCTAGCTTTGTGGAAGCAGCAGGACCCCAGTAAGGAACTGTACTTCGTGC
CTACTTAGCTTATGTCTGTGACTGTGTAAGCTTGTCCCTTGTAAGAAAAAAAAGAGAGAG
AGAGGTTCTTTTCGTTTCAGTGCCATTGTAATTGTGCATGAAGCCACACCCGCTTTCAGG
AGTGGGTCTGATGTTTACTGTCGACAGGTAGTATACATGGAATGGTGTAAATTGGTTCTT
TTGATACAAATGAGGTAGCTGTTGGAAAGCAATGGAAATTTGGATTTCTGGC